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SCN18_26_2_15_R1_B_scaffold_1059

Search features with annotation key words

Displaying items 1-30 of 38 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_26_2_15_R1_B_scaffold_1059_1
SCNPILOT_SOLID_1_TRIM150_Actinobacteria_71_9, SCNPILOT_SOLID_1_TRIM150_Actinobacteria_71_9, SCNPILOT_SOLID_1_TRIM150_Actinobacteria_71_9, Actinobacteria, Actinobacteria, Bacteria

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133..1476
DNA (1344bp) protein (448aa)
gdhA; glutamate dehydrogenase (EC:1.4.1.4)
Glutamate dehydrogenase n=1 Tax=Marinobacter manganoxydans MnI7-9 RepID=G6YYQ7_9ALTE
Glutamate dehydrogenase {ECO:0000256|PIRNR:PIRNR000185}; TaxID=1094979 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Alteromonadaceae; Marinobacter.;" source="Marinobacter manganoxydans MnI7-9.;"
SCN18_26_2_15_R1_B_scaffold_1059_2
unknown

Not on your lists

1646..1825
DNA (180bp) protein (60aa)

This feature has no annotations

SCN18_26_2_15_R1_B_scaffold_1059_3
CN-SCN_Mesorhizobium_20x, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1774..2367)
DNA (594bp) protein (198aa)
hypothetical protein n=1 Tax=Pseudaminobacter salicylatoxidans RepID=UPI0002E807B9
Peptidoglycan-binding protein {ECO:0000313|EMBL:EZQ16420.1}; TaxID=653930 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas bauzanensis.;"
hypothetical protein
SCN18_26_2_15_R1_B_scaffold_1059_4
CN-SCN_Mesorhizobium_20x, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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2542..3468
DNA (927bp) protein (309aa)
hypothetical protein n=1 Tax=Pseudaminobacter salicylatoxidans RepID=UPI0003151467
UPF0176 protein MAXJ12_08931 {ECO:0000256|HAMAP-Rule:MF_00469}; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;"
Rhodanese domain-containing protein
SCN18_26_2_15_R1_B_scaffold_1059_5
CN-SCN_Mesorhizobium_20x, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3600..4346
DNA (747bp) protein (249aa)
Uncharacterized protein n=1 Tax=Mesorhizobium opportunistum (strain LMG 24607 / HAMBI 3007 / WSM2075) RepID=F7Y961_MESOW
Uncharacterized protein {ECO:0000313|EMBL:CDX28263.1}; TaxID=69974 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium plurifarium.;"
hypothetical protein
SCN18_26_2_15_R1_B_scaffold_1059_6
CN-SCN_Mesorhizobium_20x, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4588..5343
DNA (756bp) protein (252aa)
UPI0003D04837 related cluster n=1 Tax=unknown RepID=UPI0003D04837
3-oxoacyl-ACP reductase {ECO:0000313|EMBL:ESZ29170.1}; TaxID=1287116 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. L2C084A000.;"
dehydrogenase of unknown specificity, short-chain alcohol dehydrogenase like protein
SCN18_26_2_15_R1_B_scaffold_1059_7
SCNPILOT_SOLID2_TRIM150_Rhizobiales_63_17, SCNPILOT_SOLID2_TRIM150_Rhizobiales_63_17, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5368..5826
DNA (459bp) protein (153aa)
Acetyltransferase GNAT family protein n=1 Tax=Asticcacaulis biprosthecum C19 RepID=F4QMI2_9CAUL
Acetyltransferase GNAT family protein {ECO:0000313|EMBL:EGF91423.1}; TaxID=715226 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Asticcacaulis.;" source="Asticcacaulis biprosthecum C19.;"
MarR family transcriptional regulator
SCN18_26_2_15_R1_B_scaffold_1059_8
SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5863..7053)
DNA (1191bp) protein (397aa)
Aspartate aminotransferase n=1 Tax=Mesorhizobium sp. LSHC420B00 RepID=V7FJ07_9RHIZ
Class I and II aminotransferase {ECO:0000313|EMBL:CDX44094.1}; TaxID=69974 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium plurifarium.;"
class I and II aminotransferase
SCN18_26_2_15_R1_B_scaffold_1059_9
CN-SCN_Mesorhizobium_20x, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7152..7835
DNA (684bp) protein (228aa)
Uncharacterized protein n=1 Tax=Mesorhizobium metallidurans STM 2683 RepID=M5F126_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:CCV05526.1}; TaxID=1297569 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium metallidurans STM 2683.;"
hypothetical protein
SCN18_26_2_15_R1_B_scaffold_1059_10
unknown

Not on your lists

comp(7748..7981)
DNA (234bp) protein (78aa)

This feature has no annotations

SCN18_26_2_15_R1_B_scaffold_1059_11
SCNPILOT_EXPT_1000_BF_Mesorhizobium_61_14, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7982..8860
DNA (879bp) protein (293aa)
UPI0003D046D1 related cluster n=1 Tax=unknown RepID=UPI0003D046D1
Zinc efflux system {ECO:0000313|EMBL:CDX32783.1}; TaxID=1505933 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. ORS3359.;"
cation diffusion facilitator family transporter
SCN18_26_2_15_R1_B_scaffold_1059_12
SCNPILOT_SOLID2_TRIM150_Rhizobiales_63_17, SCNPILOT_SOLID2_TRIM150_Rhizobiales_63_17, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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8835..9635
DNA (801bp) protein (267aa)
Short-chain dehydrogenase/reductase SDR n=1 Tax=Hoeflea phototrophica DFL-43 RepID=A9D1V6_9RHIZ
2-keto-3-deoxy-L-fuconate dehydrogenase {ECO:0000313|EMBL:CEJ12791.1}; TaxID=1522316 species="Bacteria.;" source="bacterium YEK0313.;"
short-chain dehydrogenase/reductase SDR
SCN18_26_2_15_R1_B_scaffold_1059_13
CN-SCN_Mesorhizobium_20x, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9635..9838
DNA (204bp) protein (68aa)
Putative uncharacterized protein n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HNS4_9RHIZ
Putative uncharacterized protein {ECO:0000313|EMBL:EHK57619.1}; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;"
hypothetical protein
SCN18_26_2_15_R1_B_scaffold_1059_14
SCNPILOT_CONT_1000_BF_Mesorhizobium_65_39, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9839..10819
DNA (981bp) protein (327aa)
NAD-dependent epimerase n=1 Tax=Rhizobium loti RepID=UPI0003657EC4
Nucleoside-diphosphate-sugar epimerase {ECO:0000313|EMBL:AID32305.1}; TaxID=763057 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium huakuii 7653R.;"
NAD-dependent epimerase/dehydratase
SCN18_26_2_15_R1_B_scaffold_1059_15
Mesorhizobium alhagi, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11125..11331)
DNA (207bp) protein (69aa)
Putative uncharacterized protein n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0I3S2_9RHIZ
Putative uncharacterized protein {ECO:0000313|EMBL:EHK52380.1}; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;"
SCN18_26_2_15_R1_B_scaffold_1059_16
SCNPILOT_EXPT_1000_BF_Rhizobiales_69_8_partial, SCNPILOT_EXPT_1000_BF_Rhizobiales_69_8_partial, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11386..12510)
DNA (1125bp) protein (375aa)
Putative uncharacterized protein n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HNS6_9RHIZ
Putative uncharacterized protein {ECO:0000313|EMBL:EHK57621.1}; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;"
ABC-type uncharacterized transport system, permease component
SCN18_26_2_15_R1_B_scaffold_1059_17
CN-SCN_Mesorhizobium_20x, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12513..13160)
DNA (648bp) protein (216aa)
hypothetical protein n=1 Tax=Hoeflea sp. 108 RepID=UPI000367B5AE
Uncharacterized protein {ECO:0000313|EMBL:CDX32771.1}; TaxID=1505933 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. ORS3359.;"
hypothetical protein
SCN18_26_2_15_R1_B_scaffold_1059_18
SCNPILOT_CONT_1000_BF_Mesorhizobium_65_39, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13273..14163)
DNA (891bp) protein (297aa)
LysR family transcriptional regulator n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HNS8_9RHIZ
LysR family transcriptional regulator {ECO:0000313|EMBL:EHK57623.1}; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;"
transcriptional regulator
SCN18_26_2_15_R1_B_scaffold_1059_19
SCNPILOT_CONT_1000_BF_Mesorhizobium_65_39, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14817..15953
DNA (1137bp) protein (379aa)
Ornithine decarboxylase n=1 Tax=Rhizobium loti (strain MAFF303099) RepID=Q98H92_RHILO
ornithine decarboxylase
Ornithine decarboxylase {ECO:0000313|EMBL:BAB49974.1}; TaxID=266835 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Rhizobium loti (strain MAFF303099) (Mesorhizobium loti).;"
SCN18_26_2_15_R1_B_scaffold_1059_20
SCNPILOT_CONT_1000_BF_Mesorhizobium_65_39, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16024..16752
DNA (729bp) protein (243aa)
UPI0003CEAF0A related cluster n=2 Tax=unknown RepID=UPI0003CEAF0A
Acetyltransferase {ECO:0000313|EMBL:ESW90040.1}; TaxID=1287336 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LSJC280B00.;"
N-acetyltransferase GCN5
SCN18_26_2_15_R1_B_scaffold_1059_21
CN-SCN_Mesorhizobium_20x, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16765..17046)
DNA (282bp) protein (94aa)
Sterol-binding domain-containing protein n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HNT2_9RHIZ
Sterol-binding domain-containing protein {ECO:0000313|EMBL:EHK57627.1}; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;"
putative sterol carrier protein
SCN18_26_2_15_R1_B_scaffold_1059_22
CN-SCN_Mesorhizobium_20x, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17114..17665)
DNA (552bp) protein (184aa)
hypothetical protein n=1 Tax=Hoeflea sp. 108 RepID=UPI00035DF3BE
Uncharacterized protein {ECO:0000313|EMBL:CDX32752.1}; TaxID=1505933 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. ORS3359.;"
hypothetical protein
SCN18_26_2_15_R1_B_scaffold_1059_23
SCNPILOT_EXPT_1000_BF_Mesorhizobium_61_14, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17684..18091)
DNA (408bp) protein (136aa)
Putative uncharacterized protein n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HNT4_9RHIZ
Putative uncharacterized protein {ECO:0000313|EMBL:EHK57629.1}; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;"
hypothetical protein
SCN18_26_2_15_R1_B_scaffold_1059_24
SCNPILOT_SOLID2_TRIM150_Rhizobiales_63_17, SCNPILOT_SOLID2_TRIM150_Rhizobiales_63_17, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18104..18670)
DNA (567bp) protein (189aa)
hypothetical protein n=1 Tax=Pseudaminobacter salicylatoxidans RepID=UPI00037E1BCC
Rod binding protein
Rod binding protein {ECO:0000313|EMBL:AGB44428.1}; TaxID=754035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium australicum (strain LMG 24608 / HAMBI 3006 / WSM2073).;"
SCN18_26_2_15_R1_B_scaffold_1059_25
SCNPILOT_CONT_1000_BF_Mesorhizobium_65_39, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18726..19112)
DNA (387bp) protein (129aa)
hypothetical protein n=1 Tax=Pseudaminobacter salicylatoxidans RepID=UPI00031100CB
Uncharacterized protein {ECO:0000313|EMBL:EXL09530.1}; TaxID=69279 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Aquamicrobium.;" source="Aquamicrobium defluvii.;"
hypothetical protein
SCN18_26_2_15_R1_B_scaffold_1059_26
CN-SCN_Mesorhizobium_20x, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19115..19867)
DNA (753bp) protein (251aa)
Flagellar biosynthetic protein fliR n=1 Tax=Mesorhizobium amorphae CCNWGS0123 RepID=G6Y293_9RHIZ
Flagellar biosynthetic protein fliR {ECO:0000256|RuleBase:RU003842}; TaxID=1082933 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium amorphae CCNWGS0123.;"
fliR; flagellar biosynthesis protein FliR
SCN18_26_2_15_R1_B_scaffold_1059_27
SCNPILOT_CONT_1000_BF_Mesorhizobium_65_39, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19864..21954)
DNA (2091bp) protein (697aa)
flagellar biosynthesis protein FlhA n=1 Tax=Hoeflea sp. 108 RepID=UPI00037FE511
Flagellar biosynthesis protein flhA {ECO:0000313|EMBL:CDX11398.1}; TaxID=1505932 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. ORS3324.;"
flagellar biosynthesis protein FlhA
SCN18_26_2_15_R1_B_scaffold_1059_28
SCNPILOT_SOLID2_TRIM150_Rhizobiales_63_17, SCNPILOT_SOLID2_TRIM150_Rhizobiales_63_17, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22038..22304)
DNA (267bp) protein (89aa)
flagellar biosynthesis protein FliQ n=1 Tax=Pseudaminobacter salicylatoxidans RepID=UPI0003134DF9
fliQ; flagellar biosynthesis protein FliQ
Flagellar biosynthesis protein FliQ {ECO:0000313|EMBL:EHK57586.1}; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;"
SCN18_26_2_15_R1_B_scaffold_1059_29
SCNPILOT_CONT_1000_BF_Mesorhizobium_65_39, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22348..22752)
DNA (405bp) protein (135aa)
Flagellar basal body rod modification protein n=1 Tax=Mesorhizobium amorphae CCNWGS0123 RepID=G6YEH8_9RHIZ
Flagellar hook capping protein {ECO:0000313|EMBL:CDX32693.1}; TaxID=1505933 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. ORS3359.;"
flgD; flagellar basal body rod modification protein
SCN18_26_2_15_R1_B_scaffold_1059_30
CN-SCN_Mesorhizobium_20x, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22758..23210)
DNA (453bp) protein (151aa)
UPI0003D0221F related cluster n=1 Tax=unknown RepID=UPI0003D0221F
flbT; flagellar biosynthesis repressor FlbT
Probable flagellum biosynthesis repressor protein FlbT {ECO:0000256|HAMAP-Rule:MF_00783}; TaxID=1287116 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. L2C084A000.;"
Displaying items 1-30 of 38 in total

View Taxonomy