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SCN18_26_2_15_R1_B_scaffold_2002

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Displaying 23 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_26_2_15_R1_B_scaffold_2002_1
SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(173..1330)
DNA (1158bp) protein (386aa)
ABC-type nitrate/sulfonate/bicarbonate transport systems periplasmic components-like protein n=1 Tax=Mesorhizobium sp. STM 4661 RepID=M5F200_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:CDX55187.1}; TaxID=69974 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium plurifarium.;"
nitrate/sulfonate/bicarbonate ABC transporter periplasmic protein
SCN18_26_2_15_R1_B_scaffold_2002_2
SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1393..2241)
DNA (849bp) protein (283aa)
Binding-protein-dependent transport systems inner membrane component n=1 Tax=Mesorhizobium metallidurans STM 2683 RepID=M5EI60_9RHIZ
Binding-protein-dependent transport systems inner membrane component {ECO:0000313|EMBL:CDX21887.1}; TaxID=1505933 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. ORS3359.;"
binding-protein-dependent transport system inner membrane protein
SCN18_26_2_15_R1_B_scaffold_2002_3
SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2238..3062)
DNA (825bp) protein (275aa)
UPI0003CDF679 related cluster n=1 Tax=unknown RepID=UPI0003CDF679
ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component
ABC transporter ATP-binding protein {ECO:0000313|EMBL:ESY93115.1}; TaxID=1287240 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNHC229A00.;"
SCN18_26_2_15_R1_B_scaffold_2002_trna_1
unknown

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3508..3579
DNA (72bp)
transferRNA Val
SCN18_26_2_15_R1_B_scaffold_2002_4
SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3695..4369)
DNA (675bp) protein (225aa)
UPI0003CE4E85 related cluster n=1 Tax=unknown RepID=UPI0003CE4E85
GntR family transcriptional regulator {ECO:0000313|EMBL:ESY78741.1}; TaxID=1287233 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNHC221B00.;"
GntR family transcriptional regulator
SCN18_26_2_15_R1_B_scaffold_2002_5
SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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4563..5693
DNA (1131bp) protein (377aa)
ABC sugar transporter, periplasmic ligand binding protein n=1 Tax=Mesorhizobium ciceri bv. biserrulae (strain HAMBI 2942 / LMG 23838 / WSM1271) RepID=E8TC93_MESCW
sugar ABC transporter periplasmic ligand binding protein
ABC sugar transporter, periplasmic ligand binding protein {ECO:0000313|EMBL:ADV14401.1}; Flags: Precursor;; TaxID=765698 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium ciceri bv. biserrulae (strain HAMBI 2942 / LMG 23838 /; WSM1271).;"
SCN18_26_2_15_R1_B_scaffold_2002_6
SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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5772..7313
DNA (1542bp) protein (514aa)
ABC transporter related protein n=1 Tax=Mesorhizobium ciceri bv. biserrulae (strain HAMBI 2942 / LMG 23838 / WSM1271) RepID=E8TC92_MESCW
ABC transporter
ABC transporter related protein {ECO:0000313|EMBL:ADV14400.1}; TaxID=765698 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium ciceri bv. biserrulae (strain HAMBI 2942 / LMG 23838 /; WSM1271).;"
SCN18_26_2_15_R1_B_scaffold_2002_7
SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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7310..9379
DNA (2070bp) protein (690aa)
UPI0003CEA125 related cluster n=1 Tax=unknown RepID=UPI0003CEA125
ABC transporter permease {ECO:0000313|EMBL:ESY70993.1}; TaxID=1287243 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNHC232B00.;"
inner-membrane translocator
SCN18_26_2_15_R1_B_scaffold_2002_8
SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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9393..10199
DNA (807bp) protein (269aa)
fabG; 3-ketoacyl-ACP reductase (EC:1.1.1.100)
UPI0003CEDAB4 related cluster n=1 Tax=unknown RepID=UPI0003CEDAB4
3-ketoacyl-ACP reductase {ECO:0000313|EMBL:ESY70994.1}; TaxID=1287243 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNHC232B00.;"
SCN18_26_2_15_R1_B_scaffold_2002_9
SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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10241..11188
DNA (948bp) protein (316aa)
3-hydroxyacyl-CoA dehydrogenase {ECO:0000313|EMBL:ESW80424.1}; EC=1.1.1.35 {ECO:0000313|EMBL:ESW80424.1};; TaxID=1287336 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LSJC280B00.;"
3-hydroxyacyl-CoA dehydrogenase (EC:1.1.1.35)
UPI0003CE84F7 related cluster n=1 Tax=unknown RepID=UPI0003CE84F7
SCN18_26_2_15_R1_B_scaffold_2002_10
SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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11185..12147
DNA (963bp) protein (321aa)
hypothetical protein n=1 Tax=Rhizobium loti RepID=UPI000375C0EA
Uncharacterized protein {ECO:0000313|EMBL:AID30496.1}; TaxID=763057 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium huakuii 7653R.;"
hypothetical protein
SCN18_26_2_15_R1_B_scaffold_2002_11
SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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12173..12967
DNA (795bp) protein (265aa)
Putative uncharacterized protein n=1 Tax=Cronobacter pulveris RepID=C7C5D6_9ENTR
IclR family transcriptional regulator {ECO:0000313|EMBL:KDM66098.1}; TaxID=1464546 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidiphilium.;" source="Acidiphilium sp. JA12-A1.;"
SMP-30/gluconolaconase/LRE-like region-containing protein
SCN18_26_2_15_R1_B_scaffold_2002_12
SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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13010..13888
DNA (879bp) protein (293aa)
SMP-30/Gluconolaconase/LRE domain protein n=1 Tax=Mesorhizobium metallidurans STM 2683 RepID=M5ES90_9RHIZ
SMP-30/Gluconolaconase/LRE domain protein {ECO:0000313|EMBL:CCV07167.1}; TaxID=1297569 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium metallidurans STM 2683.;"
SMP-30/Gluconolaconase/LRE domain-containing protein
SCN18_26_2_15_R1_B_scaffold_2002_13
SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(13946..14410)
DNA (465bp) protein (155aa)
Transcriptional regulator, AsnC family n=1 Tax=Methylocella silvestris (strain BL2 / DSM 15510 / NCIMB 13906) RepID=B8EK48_METSB
AsnC family transcriptional regulator
Transcriptional regulator, AsnC family {ECO:0000313|EMBL:ACK50588.1}; TaxID=395965 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Beijerinckiaceae; Methylocella.;" source="Methylocella silvestris (strain BL2 / DSM 15510 / NCIMB 13906).;"
SCN18_26_2_15_R1_B_scaffold_2002_14
SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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14540..16933
DNA (2394bp) protein (798aa)
Pyruvate dehydrogenase E1 component {ECO:0000256|PIRNR:PIRNR000156}; EC=1.2.4.1 {ECO:0000256|PIRNR:PIRNR000156};; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;"
Transketolase central region n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0I144_9RHIZ
transketolase central region
SCN18_26_2_15_R1_B_scaffold_2002_15
SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(17001..17327)
DNA (327bp) protein (109aa)
Response regulator receiver protein n=1 Tax=Nitratireductor indicus C115 RepID=K2PMW9_9RHIZ
Response regulator receiver protein {ECO:0000313|EMBL:EHK57675.1}; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;"
response regulator receiver protein
SCN18_26_2_15_R1_B_scaffold_2002_16
SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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17563..18453
DNA (891bp) protein (297aa)
N-formylglutamate amidohydrolase n=1 Tax=Mesorhizobium amorphae CCNWGS0123 RepID=G6Y2E8_9RHIZ
N-formylglutamate amidohydrolase {ECO:0000313|EMBL:EHH14131.1}; TaxID=1082933 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium amorphae CCNWGS0123.;"
N-formylglutamate amidohydrolase
SCN18_26_2_15_R1_B_scaffold_2002_17
SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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18659..19432
DNA (774bp) protein (258aa)
Histidinol-phosphate phosphatase {ECO:0000313|EMBL:CCV05491.1}; EC=3.1.3.25 {ECO:0000313|EMBL:CCV05491.1};; TaxID=1297569 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium metallidurans STM 2683.;"
Histidinol-phosphate phosphatase n=1 Tax=Mesorhizobium metallidurans STM 2683 RepID=M5F0Z6_9RHIZ
Mono-phosphatase
SCN18_26_2_15_R1_B_scaffold_2002_18
SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(19441..20469)
DNA (1029bp) protein (343aa)
UPI0003CEFD1F related cluster n=1 Tax=unknown RepID=UPI0003CEFD1F
Lysophospholipase {ECO:0000313|EMBL:ESY72436.1}; TaxID=1287252 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNHC252B00.;"
lysophospholipase
SCN18_26_2_15_R1_B_scaffold_2002_19
SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20819..21292
DNA (474bp) protein (158aa)
UPI0003CE66FD related cluster n=1 Tax=unknown RepID=UPI0003CE66FD
Heat shock protein IbpA {ECO:0000313|EMBL:ESY72437.1}; TaxID=1287252 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNHC252B00.;"
small heat shock protein
SCN18_26_2_15_R1_B_scaffold_2002_20
SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(21373..22422)
DNA (1050bp) protein (350aa)
L-threonine aldolase {ECO:0000256|PIRNR:PIRNR038940}; EC=4.1.2.48 {ECO:0000256|PIRNR:PIRNR038940};; TaxID=1287233 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNHC221B00.;"
Threonine aldolase (EC:4.1.2.5)
UPI0003CE05B5 related cluster n=1 Tax=unknown RepID=UPI0003CE05B5
SCN18_26_2_15_R1_B_scaffold_2002_21
SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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22796..27532
DNA (4737bp) protein (1579aa)
glutamate synthase n=1 Tax=Pseudaminobacter salicylatoxidans RepID=UPI0002FB5D0B
Glutamate synthase, large subunit {ECO:0000313|EMBL:EHK57683.1}; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;"
glutamate synthase family protein
SCN18_26_2_15_R1_B_scaffold_2002_22
SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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27681..27752
DNA (72bp) protein (24aa)
Displaying 23 items

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