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SCN18_26_2_15_R1_B_scaffold_1537

Search features with annotation key words

Displaying 23 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_26_2_15_R1_B_scaffold_1537_trna_1
unknown

Not on your lists

77..150
DNA (74bp)
transferRNA Arg
SCN18_26_2_15_R1_B_scaffold_1537_1
SCNPILOT_EXPT_300_BF_Sphingomonas_67_13, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(109..1797)
DNA (1689bp) protein (563aa)
Resolvase domain n=1 Tax=Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2) RepID=A7IJ98_XANP2
resolvase domain-containing protein
Resolvase domain {ECO:0000313|EMBL:ABS68091.1}; TaxID=78245 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Xanthobacter.;" source="Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2).;"
SCN18_26_2_15_R1_B_scaffold_1537_2
SCNPILOT_CONT_300_BF_Rhizobiales_62_47, SCNPILOT_CONT_300_BF_Rhizobiales_62_47, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1794..2060)
DNA (267bp) protein (89aa)
Uncharacterized protein n=1 Tax=Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2) RepID=A7IJ99_XANP2
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABS68092.1}; TaxID=78245 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Xanthobacter.;" source="Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2).;"
SCN18_26_2_15_R1_B_scaffold_1537_3
scnpilot_dereplicated_Plasmid_Rhizobiales_2, scnpilot_dereplicated_Plasmid_Rhizobiales_2, scnpilot_dereplicated_Plasmid_Rhizobiales_2, scnpilot_dereplicated_Plasmid_Rhizobiales_2, scnpilot_dereplicated_Plasmid_Rhizobiales_2, Plasmid-like

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2147..3472
DNA (1326bp) protein (442aa)
Conjugation TrbI family protein n=1 Tax=Gluconacetobacter diazotrophicus (strain ATCC 49037 / DSM 5601 / PAl5) RepID=B5ZHT7_GLUDA
conjugation TrbI family protein
Conjugation TrbI family protein {ECO:0000313|EMBL:ACI52565.1}; TaxID=272568 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Gluconacetobacter.;" source="Gluconacetobacter diazotrophicus (strain ATCC 49037 / DSM 5601 /; PAl5).;"
SCN18_26_2_15_R1_B_scaffold_1537_4
SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3484..3744
DNA (261bp) protein (87aa)
Uncharacterized protein n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RCZ4_PELHB
Uncharacterized protein {ECO:0000313|EMBL:ETR77818.1}; TaxID=1429916 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. P52-10.;"
hypothetical protein
SCN18_26_2_15_R1_B_scaffold_1537_5
SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3717..4628)
DNA (912bp) protein (304aa)
hypothetical protein n=1 Tax=Chelatococcus sp. GW1 RepID=UPI00037D7E22
LysR family transcriptional regulator {ECO:0000313|EMBL:ETR77817.1}; TaxID=1429916 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. P52-10.;"
transcriptional regulator
SCN18_26_2_15_R1_B_scaffold_1537_6
unknown

Not on your lists

comp(4689..5066)
DNA (378bp) protein (126aa)

This feature has no annotations

SCN18_26_2_15_R1_B_scaffold_1537_7
SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5081..6364)
DNA (1284bp) protein (428aa)
Uncharacterized protein involved in copper resistance n=1 Tax=Rhodanobacter denitrificans RepID=M4NGR0_9GAMM
uncharacterized protein involved in copper resistance
Uncharacterized protein involved in copper resistance {ECO:0000313|EMBL:AGG88843.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
SCN18_26_2_15_R1_B_scaffold_1537_8
SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6361..8100)
DNA (1740bp) protein (580aa)
Copper-resistance protein, CopA family protein n=1 Tax=Rhodanobacter sp. 115 RepID=I4VRW6_9GAMM
Copper-resistance protein, CopA family protein {ECO:0000313|EMBL:EIL89957.1}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;"
copper-resistance protein, CopA family
SCN18_26_2_15_R1_B_scaffold_1537_9
SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8219..8794)
DNA (576bp) protein (192aa)
RNA polymerase sigma factor cnrH n=1 Tax=Brevundimonas diminuta ATCC 11568 RepID=F4QXW3_BREDI
RNA polymerase sigma factor cnrH {ECO:0000313|EMBL:GAM97426.1}; TaxID=1605283 species="Bacteria; Proteobacteria; Alphaproteobacteria.;" source="alpha proteobacterium U9-1i.;"
RNA polymerase sigma-70 factor,ECF subfamily
SCN18_26_2_15_R1_B_scaffold_1537_10
SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8791..9234)
DNA (444bp) protein (148aa)
Uncharacterized protein n=1 Tax=Caulobacter sp. AP07 RepID=J2H529_9CAUL
Uncharacterized protein {ECO:0000313|EMBL:EJL37950.1}; Flags: Precursor;; TaxID=1144304 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Caulobacter.;" source="Caulobacter sp. AP07.;"
hypothetical protein
SCN18_26_2_15_R1_B_scaffold_1537_11
SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9231..9512)
DNA (282bp) protein (94aa)
SCN18_26_2_15_R1_B_scaffold_1537_12
SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9662..10264
DNA (603bp) protein (201aa)
Cytochrome C n=1 Tax=Sphingobium baderi LL03 RepID=T0I1N1_9SPHN
cytochrome c family protein
Cytochrome C {ECO:0000313|EMBL:KEZ15191.1}; TaxID=13690 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium yanoikuyae (Sphingomonas yanoikuyae).;"
SCN18_26_2_15_R1_B_scaffold_1537_13
SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10277..10597
DNA (321bp) protein (107aa)
Uncharacterized protein n=1 Tax=Rhodanobacter denitrificans RepID=M4NM93_9GAMM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGG88841.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
SCN18_26_2_15_R1_B_scaffold_1537_14
SCNPILOT_CONT_300_BF_Rhizobiales_62_47, SCNPILOT_CONT_300_BF_Rhizobiales_62_47, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10704..10922)
DNA (219bp) protein (73aa)
Uncharacterized protein n=1 Tax=Bradyrhizobium sp. STM 3843 RepID=H0TUP2_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:CCE10180.1}; TaxID=551947 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. STM 3843.;"
hypothetical protein
SCN18_26_2_15_R1_B_scaffold_1537_15
SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11024..13384
DNA (2361bp) protein (787aa)
Heavy metal translocating P-type ATPase n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8PMX1_9BRAD
Heavy metal translocating P-type ATPase {ECO:0000313|EMBL:EKS42139.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
haloacid dehalogenase
SCN18_26_2_15_R1_B_scaffold_1537_16
SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13529..13822)
DNA (294bp) protein (98aa)
SCN18_26_2_15_R1_B_scaffold_1537_17
SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13976..14464
DNA (489bp) protein (163aa)
SCN18_26_2_15_R1_B_scaffold_1537_18
SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14553..14999
DNA (447bp) protein (149aa)
Uncharacterized protein n=1 Tax=Nitrobacter sp. Nb-311A RepID=A3WWA5_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:CCB64714.1}; TaxID=717785 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium sp. (strain MC1).;"
hypothetical protein
SCN18_26_2_15_R1_B_scaffold_1537_19
SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15074..16492
DNA (1419bp) protein (473aa)
Cation transporter n=1 Tax=Asaia sp. SF2.1 RepID=V8A3Q9_9PROT
Heavy metal/cation efflux pump CzcB/HlyD {ECO:0000313|EMBL:GAJ29825.1}; TaxID=1231351 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidomonas.;" source="Acidomonas methanolica NBRC 104435.;"
RND family efflux transporter MFP subunit
SCN18_26_2_15_R1_B_scaffold_1537_20
SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16489..19605
DNA (3117bp) protein (1039aa)
Heavy metal efflux pump CzcA n=1 Tax=Pseudomonas stutzeri ATCC 14405 = CCUG 16156 RepID=H7ERA5_PSEST
Cobalt-zinc-cadmium resistance protein CzcA Cation efflux system protein CusA {ECO:0000313|EMBL:KIL99076.1}; TaxID=272627 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Magnetospirillum.;" source="Magnetospirillum magnetotacticum MS-1.;"
czcA; heavy metal efflux pump CzcA
SCN18_26_2_15_R1_B_scaffold_1537_21
unknown

Not on your lists

comp(19728..19967)
DNA (240bp) protein (80aa)

This feature has no annotations

SCN18_26_2_15_R1_B_scaffold_1537_22
SCNPILOT_EXPT_750_BF_Xanthomonadales_66_150, SCNPILOT_EXPT_750_BF_Xanthomonadales_66_150, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20037..21014
DNA (978bp) protein (326aa)
hypothetical protein n=1 Tax=Latescibacteria bacterium SCGC AAA252-D10 RepID=UPI000360EAD6
Uncharacterized protein {ECO:0000313|EMBL:KJJ95391.1}; TaxID=1619951 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae.;" source="Burkholderiaceae bacterium 26.;"
putative ATP-dependent endonuclease of the OLD family
Displaying 23 items

View Taxonomy