ggKbase home page

SCN18_26_2_15_R1_B_scaffold_2634

Search features with annotation key words

Displaying 23 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_26_2_15_R1_B_scaffold_2634_1
SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

83..928
DNA (846bp) protein (282aa)
Pantothenate synthetase {ECO:0000256|HAMAP-Rule:MF_00158}; Short=PS {ECO:0000256|HAMAP-Rule:MF_00158};; EC=6.3.2.1 {ECO:0000256|HAMAP-Rule:MF_00158, ECO:0000256|SAAS:SAAS00094309};; Pantoate--beta-alanine ligase {ECO:0000256|HAMAP-Rule:MF_00158}; Pantoate-activating enzyme {ECO:0000256|HAMAP-Rule:MF_00158}; TaxID=1605283 species="Bacteria; Proteobacteria; Alphaproteobacteria.;" source="alpha proteobacterium U9-1i.;"
hypothetical protein n=1 Tax=Chelatococcus sp. GW1 RepID=UPI0002FE2D65
panC; pantoate--beta-alanine ligase
SCN18_26_2_15_R1_B_scaffold_2634_2
SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(994..1428)
DNA (435bp) protein (145aa)
hypothetical protein n=1 Tax=Methyloferula stellata RepID=UPI00035CF833
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABS64397.1}; TaxID=402881 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhodobiaceae; Parvibaculum.;" source="Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966).;"
SCN18_26_2_15_R1_B_scaffold_2634_3
SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1434..3341)
DNA (1908bp) protein (636aa)
Carbamoyl-phosphate synthase L chain, N-terminal domain protein n=1 Tax=Sphingomonas sp. S17 RepID=F3WYE8_9SPHN
DNA, contig: SP607 {ECO:0000313|EMBL:GAN12236.1}; TaxID=1219050 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas paucimobilis NBRC 13935.;"
carbamoyl-phosphate synthase L chain ATP-binding
SCN18_26_2_15_R1_B_scaffold_2634_4
SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3489..3647)
DNA (159bp) protein (53aa)
SCN18_26_2_15_R1_B_scaffold_2634_5
SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3836..4684)
DNA (849bp) protein (283aa)
Uncharacterized protein n=1 Tax=Pseudoalteromonas spongiae UST010723-006 RepID=U1LA49_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:ERG55374.1}; TaxID=1117319 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Pseudoalteromonadaceae; Pseudoalteromonas.;" source="Pseudoalteromonas spongiae UST010723-006.;"
hypothetical protein
SCN18_26_2_15_R1_B_scaffold_2634_6
SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4884..6476)
DNA (1593bp) protein (531aa)
Propionyl-CoA carboxylase n=1 Tax=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) RepID=A7HWW1_PARL1
Propionyl-CoA carboxylase {ECO:0000313|EMBL:GAK46382.1}; TaxID=1333998 species="Bacteria; Proteobacteria; Alphaproteobacteria.;" source="alpha proteobacterium MA2.;"
propionyl-CoA carboxylase
SCN18_26_2_15_R1_B_scaffold_2634_7
SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6616..7797)
DNA (1182bp) protein (394aa)
acetyl-CoA acetyltransferase (EC:2.3.1.9)
Acetyl-CoA acetyltransferase {ECO:0000313|EMBL:AIB15082.1}; EC=2.3.1.9 {ECO:0000313|EMBL:AIB15082.1};; TaxID=192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum.;" source="Azospirillum brasilense.;"
Acetyl-CoA acetyltransferase n=1 Tax=Tistrella mobilis (strain KA081020-065) RepID=I3TNS8_TISMK
SCN18_26_2_15_R1_B_scaffold_2634_8
SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7794..8522)
DNA (729bp) protein (243aa)
Disulfide-bond oxidoreductase YfcG (EC:1.8.4.-)
Glutathione S-transferase-like protein n=1 Tax=Sphingopyxis sp. MC1 RepID=N9VYQ9_9SPHN
Tax=RIFCSPHIGHO2_12_FULL_Sphingopyxis_65_19_curated
SCN18_26_2_15_R1_B_scaffold_2634_9
SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8589..8870
DNA (282bp) protein (94aa)
SCN18_26_2_15_R1_B_scaffold_2634_10
SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8874..9173
DNA (300bp) protein (100aa)
Addiction module toxin, RelE/StbE family n=1 Tax=Bradyrhizobium sp. ORS 285 RepID=H0S2F5_9BRAD
RelE/StbE family addiction module toxin
Addiction module toxin, RelE/StbE family {ECO:0000313|EMBL:CCD88382.1}; TaxID=115808 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. ORS 285.;"
SCN18_26_2_15_R1_B_scaffold_2634_11
SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9170..9952)
DNA (783bp) protein (261aa)
SCN18_26_2_15_R1_B_scaffold_2634_12
SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10136..11308)
DNA (1173bp) protein (391aa)
Isovaleryl-CoA dehydrogenase n=1 Tax=Azorhizobium caulinodans (strain ATCC 43989 / DSM 5975 / ORS 571) RepID=A8I9U5_AZOC5
isovaleryl-CoA dehydrogenase
Isovaleryl-CoA dehydrogenase {ECO:0000313|EMBL:BAF88831.1}; TaxID=438753 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Azorhizobium.;" source="Azorhizobium caulinodans (strain ATCC 43989 / DSM 5975 / JCM 20966 /; NBRC 14845 / NCIMB 13405 / ORS 571).;"
SCN18_26_2_15_R1_B_scaffold_2634_13
SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11340..11792)
DNA (453bp) protein (151aa)
SCN18_26_2_15_R1_B_scaffold_2634_trna_1
unknown

Not on your lists

comp(12004..12084)
DNA (81bp)
transferRNA Leu
SCN18_26_2_15_R1_B_scaffold_2634_14
SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12162..12956)
DNA (795bp) protein (265aa)
Phosphoadenosine phosphosulfate reductase n=1 Tax=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) RepID=A7HWV2_PARL1
Phosphoadenosine phosphosulfate reductase {ECO:0000313|EMBL:GAK46391.1}; TaxID=1333998 species="Bacteria; Proteobacteria; Alphaproteobacteria.;" source="alpha proteobacterium MA2.;"
phosphoadenosine phosphosulfate reductase
SCN18_26_2_15_R1_B_scaffold_2634_15
SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12953..13459)
DNA (507bp) protein (169aa)
Uncharacterized protein n=1 Tax=alpha proteobacterium IMCC14465 RepID=J9DUC8_9PROT
Siroheme synthase {ECO:0000313|EMBL:KJB94830.1}; TaxID=1385368 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Skermanella.;" source="Skermanella aerolata KACC 11604.;"
siroheme synthase
SCN18_26_2_15_R1_B_scaffold_2634_16
SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13576..13812)
DNA (237bp) protein (79aa)
flagellar motor switch protein fliN n=1 Tax=Hirschia maritima RepID=UPI00036B2879
Surface presentation of antigens (SPOA) protein {ECO:0000313|EMBL:GAK46393.1}; TaxID=1333998 species="Bacteria; Proteobacteria; Alphaproteobacteria.;" source="alpha proteobacterium MA2.;"
Surface presentation of antigen (SpoA) domain-containing protein
SCN18_26_2_15_R1_B_scaffold_2634_17
SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13823..14521
DNA (699bp) protein (233aa)
Octanoyltransferase {ECO:0000256|HAMAP-Rule:MF_00013, ECO:0000256|PIRNR:PIRNR016262}; EC=2.3.1.181 {ECO:0000256|HAMAP-Rule:MF_00013, ECO:0000256|PIRNR:PIRNR016262};; Lipoate-protein ligase B {ECO:0000256|HAMAP-Rule:MF_00013}; Lipoyl/octanoyl transferase {ECO:0000256|HAMAP-Rule:MF_00013}; Octanoyl-[acyl-carrier-protein]-protein N-octanoyltransferase {ECO:0000256|HAMAP-Rule:MF_00013}; TaxID=1333998 species="Bacteria; Proteobacteria; Alphaproteobacteria.;" source="alpha proteobacterium MA2.;"
Octanoyltransferase n=1 Tax=Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2) RepID=A7IMR1_XANP2
lipoate-protein ligase B
SCN18_26_2_15_R1_B_scaffold_2634_18
SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14665..15054
DNA (390bp) protein (130aa)
Conserved hypothetical signal peptide protein n=1 Tax=Caulobacter sp. (strain K31) RepID=B0T414_CAUSK
putative signal peptide protein
Conserved hypothetical signal peptide protein {ECO:0000313|EMBL:ABZ73898.1}; Flags: Precursor;; TaxID=366602 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Caulobacter.;" source="Caulobacter sp. (strain K31).;"
SCN18_26_2_15_R1_B_scaffold_2634_19
SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15067..15354)
DNA (288bp) protein (96aa)
Acylphosphatase {ECO:0000313|EMBL:EFH09636.1}; EC=3.6.1.7 {ECO:0000313|EMBL:EFH09636.1};; TaxID=525371 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Roseomonas.;" source="Roseomonas cervicalis ATCC 49957.;"
acylphosphatase n=1 Tax=Spongiibacter tropicus RepID=UPI0003B7290E
acyP; acylphosphatase
SCN18_26_2_15_R1_B_scaffold_2634_20
SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15417..16832
DNA (1416bp) protein (472aa)
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI00036A2C42
Uncharacterized protein {ECO:0000313|EMBL:KDP73462.1}; TaxID=106592 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Ensifer.;" source="Ensifer adhaerens (Sinorhizobium morelense).;"
peptidase S41
SCN18_26_2_15_R1_B_scaffold_2634_21
SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16833..18827)
DNA (1995bp) protein (665aa)
Carbamoyl-phosphate synthase L chain ATP-binding n=1 Tax=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) RepID=A7HWU7_PARL1
carbamoyl-phosphate synthase L chain ATP-binding
Carbamoyl-phosphate synthase L chain ATP-binding {ECO:0000313|EMBL:ABS64380.1}; TaxID=402881 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhodobiaceae; Parvibaculum.;" source="Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966).;"
SCN18_26_2_15_R1_B_scaffold_2634_22
SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18940..19137)
DNA (198bp) protein (66aa)
Displaying 23 items

View Taxonomy