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SCN18_26_2_15_R1_B_scaffold_375

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Displaying items 1-30 of 232 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_26_2_15_R1_B_scaffold_375_1
SCNPILOT_EXPT_1000_BF_Actinomycetales_Beutenbergia_73_13, SCNPILOT_EXPT_1000_BF_Actinomycetales_Beutenbergia_73_13, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(149..910)
DNA (762bp) protein (254aa)
ppgK; polyphosphate-dependent glucokinase (EC:2.7.1.63)
hypothetical protein n=1 Tax=Dehalobacter sp. FTH1 RepID=UPI00036F1A2F
Tax=BJP_08E140C01_Actinomycetales_70_11
SCN18_26_2_15_R1_B_scaffold_375_2
SCNPILOT_EXPT_750_BF_Actinomycetales_70_150, SCNPILOT_EXPT_750_BF_Actinomycetales_70_150, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

968..1945
DNA (978bp) protein (326aa)
galE1; UDP-glucose 4-epimerase (EC:5.1.3.2)
UDP-glucose 4-epimerase n=1 Tax=Propionibacterium freudenreichii subsp. shermanii (strain ATCC 9614 / CIP 103027 / CIRM-BIA1) RepID=D7GI32_PROFC
Tax=BJP_08E140C01_Actinomycetales_70_11
SCN18_26_2_15_R1_B_scaffold_375_3
SCNPILOT_CONT_500_P_Xanthomonadales_66_42, SCNPILOT_CONT_500_P_Xanthomonadales_66_42, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1879..3549)
DNA (1671bp) protein (557aa)
hypothetical protein n=1 Tax=Dehalobacter sp. FTH1 RepID=UPI00037DF490
hypothetical protein
Tax=BJP_08E140C01_Actinomycetales_67_18
SCN18_26_2_15_R1_B_scaffold_375_4
SCNPILOT_EXPT_1000_BF_Actinomycetales_Beutenbergia_73_13, SCNPILOT_EXPT_1000_BF_Actinomycetales_Beutenbergia_73_13, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3546..4037)
DNA (492bp) protein (164aa)
hypothetical protein n=1 Tax=Dehalobacter sp. FTH1 RepID=UPI0003675A02
membrane-flanked domain-containing protein
Tax=BJP_08E140C01_Actinomycetales_67_18
SCN18_26_2_15_R1_B_scaffold_375_5
SCNPILOT_CONT_1000_BF_Actinobacteria_69_20, SCNPILOT_CONT_1000_BF_Actinobacteria_69_20, SCNPILOT_CONT_1000_BF_Actinobacteria_69_20, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(4048..4770)
DNA (723bp) protein (241aa)
hypothetical protein n=1 Tax=Dehalobacter sp. FTH1 RepID=UPI0003656CBA
hypothetical protein
Tax=BJP_08E140C01_Actinomycetales_67_18
SCN18_26_2_15_R1_B_scaffold_375_6
SCNpilot_BF_INOC_Solirubrobacterales_68_7, SCNpilot_BF_INOC_Solirubrobacterales_68_7, SCNpilot_BF_INOC_Solirubrobacterales_68_7, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(4867..5562)
DNA (696bp) protein (232aa)
hypothetical protein n=1 Tax=Dehalobacter sp. FTH1 RepID=UPI0003673476
LuxR family transcriptional regulator
Tax=BJP_08E140C01_Actinomycetales_67_18
SCN18_26_2_15_R1_B_scaffold_375_trna_1
unknown

Not on your lists

5838..5908
DNA (71bp)
transferRNA Gly
SCN18_26_2_15_R1_B_scaffold_375_7
SCNPILOT_EXPT_1000_BF_Microbacterium_69_10, Microbacterium, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

Not on your lists

comp(5947..6555)
DNA (609bp) protein (203aa)
hypothetical protein n=1 Tax=Promicromonospora sukumoe RepID=UPI000371326B
Fic family protein {ECO:0000313|EMBL:EEP20754.1}; Uncharacterized protein {ECO:0000313|EMBL:BAQ96804.1}; TaxID=518635 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium angulatum DSM 20098 = JCM 7096.;"
filamentation induced by cAMP protein fic
SCN18_26_2_15_R1_B_scaffold_375_8
SCNPILOT_SOLID_1_TRIM150_Microbacterium_69_53, Microbacterium, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

Not on your lists

comp(6543..6899)
DNA (357bp) protein (119aa)
hypothetical protein n=1 Tax=Brachybacterium muris RepID=UPI000346D911
Fic family protein {ECO:0000313|EMBL:KEY28039.1}; TaxID=1457183 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. infantis EK3.;"
filamentation induced by cAMP protein fic
SCN18_26_2_15_R1_B_scaffold_375_9
Pseudonocardia dioxanivorans_SCN_Pseudonocardia_26x, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

7284..8549
DNA (1266bp) protein (422aa)
hypothetical protein n=1 Tax=Dehalobacter sp. FTH1 RepID=UPI000362DBE0
Putative multidrug resistance protein {ECO:0000313|EMBL:CCH71092.1}; TaxID=1193181 species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Tetrasphaera.;" source="Tetrasphaera elongata Lp2.;"
major facilitator transporter
SCN18_26_2_15_R1_B_scaffold_375_10
SCNPILOT_EXPT_500_BF_STEP10_Armatimonadetes_55_34, SCNPILOT_EXPT_500_BF_STEP10_Armatimonadetes_55_34, SCNPILOT_EXPT_500_BF_STEP10_Armatimonadetes_55_34, SCNPILOT_EXPT_500_BF_STEP10_Armatimonadetes_55_34, SCNPILOT_EXPT_500_BF_STEP10_Armatimonadetes_55_34, Bacteria

Not on your lists

comp(8539..9738)
DNA (1200bp) protein (400aa)
hypothetical protein n=1 Tax=Dehalobacter sp. FTH1 RepID=UPI0003809D14
D-isomer specific 2-hydroxyacid dehydrogenase
D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding {ECO:0000313|EMBL:ABJ84927.1}; TaxID=234267 species="Bacteria; Acidobacteria; Solibacteres; Solibacterales; Solibacteraceae; Candidatus Solibacter.;" source="Solibacter usitatus (strain Ellin6076).;"
SCN18_26_2_15_R1_B_scaffold_375_11
CN-SCN_Leifsonia_139x, CN-SCN_Leifsonia_139x, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

9867..11234
DNA (1368bp) protein (456aa)
MFS transporter n=1 Tax=Glaciibacter superstes RepID=UPI0003B38F8B
MFS transporter {ECO:0000313|EMBL:KHL00097.1}; TaxID=1348253 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium mangrovi.;"
hypothetical protein
SCN18_26_2_15_R1_B_scaffold_375_12
SCNPILOT_EXPT_750_BF_Actinomycetales_70_150, SCNPILOT_EXPT_750_BF_Actinomycetales_70_150, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

11237..12592
DNA (1356bp) protein (452aa)
hypothetical protein n=1 Tax=Cryocola sp. 340MFSha3.1 RepID=UPI00035C125F
Pyridoxal-dependent decarboxylase {ECO:0000313|EMBL:KHK99806.1}; TaxID=1348253 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium mangrovi.;"
pyridoxal-dependent decarboxylase
SCN18_26_2_15_R1_B_scaffold_375_13
SCNPILOT_EXPT_750_BF_Actinomycetales_70_150, SCNPILOT_EXPT_750_BF_Actinomycetales_70_150, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

12795..13454
DNA (660bp) protein (220aa)
Transcriptional regulator, TetR family n=2 Tax=Mycobacterium gilvum RepID=A4TGI1_MYCGI
TetR family transcriptional regulator
Transcriptional regulator, tetR family {ECO:0000313|EMBL:ADU02079.1}; Flags: Precursor;; TaxID=278137 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium.;" source="Mycobacterium sp. (strain Spyr1).;"
SCN18_26_2_15_R1_B_scaffold_375_14
SCNPILOT_EXPT_750_BF_Actinomycetales_70_150, SCNPILOT_EXPT_750_BF_Actinomycetales_70_150, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

13451..14206
DNA (756bp) protein (252aa)
hypothetical protein n=1 Tax=Microbacterium sp. 292MF RepID=UPI0003809E16
Patatin {ECO:0000313|EMBL:KDA05903.1}; TaxID=1479651 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. CH12i.;"
patatin
SCN18_26_2_15_R1_B_scaffold_375_15
SCNpilot_BF_INOC_Clostridium_37_18, SCNpilot_BF_INOC_Clostridium_37_18, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14208..14951
DNA (744bp) protein (248aa)
Putative membrane protein n=1 Tax=Clostridium sp. CAG:628 RepID=R7MF59_9CLOT
Putative membrane protein {ECO:0000313|EMBL:CDE99016.1}; TaxID=1262829 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:628.;"
hypothetical protein
SCN18_26_2_15_R1_B_scaffold_375_16
SCN_Clostridium_9x, SCN_Clostridium_9x, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14961..15377
DNA (417bp) protein (139aa)
Hydrolase, NUDIX family n=1 Tax=Holdemania filiformis DSM 12042 RepID=B9YE46_9FIRM
Hydrolase, NUDIX family {ECO:0000313|EMBL:EEF65743.1}; TaxID=545696 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemania.;" source="Holdemania filiformis DSM 12042.;"
Xanthosine triphosphate pyrophosphatase
SCN18_26_2_15_R1_B_scaffold_375_17
unknown

Not on your lists

comp(15304..15741)
DNA (438bp) protein (146aa)

This feature has no annotations

SCN18_26_2_15_R1_B_scaffold_375_18
SCNPILOT_SOLID2_TRIM150_Actinobacteria_69_241, SCNPILOT_SOLID2_TRIM150_Actinobacteria_69_241, SCNPILOT_SOLID2_TRIM150_Actinobacteria_69_241, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(15840..16466)
DNA (627bp) protein (209aa)
hypothetical protein n=1 Tax=Dehalobacter sp. FTH1 RepID=UPI0003784C68
IclR family transcriptional regulator
Tax=BJP_08E140C01_Actinomycetales_70_11
SCN18_26_2_15_R1_B_scaffold_375_19
BJP_08E140C01_Actinomycetales_70_11, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

Not on your lists

16523..17026
DNA (504bp) protein (168aa)
hypothetical protein n=1 Tax=Dehalobacter sp. FTH1 RepID=UPI00037291FB
hemerythrin HHE cation binding domain protein
Tax=BJP_08E140C01_Actinomycetales_70_11
SCN18_26_2_15_R1_B_scaffold_375_20
SCNPILOT_SOLID2_TRIM150_Actinobacteria_70_13, SCNPILOT_SOLID2_TRIM150_Actinobacteria_70_13, SCNPILOT_SOLID2_TRIM150_Actinobacteria_70_13, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

17023..18144
DNA (1122bp) protein (374aa)
hypothetical protein n=1 Tax=Dehalobacter sp. FTH1 RepID=UPI00038028CB
hypothetical protein
Tax=BJP_08E140C01_Actinomycetales_70_11
SCN18_26_2_15_R1_B_scaffold_375_21
SCNPILOT_SOLID2_TRIM150_Actinobacteria_70_13, SCNPILOT_SOLID2_TRIM150_Actinobacteria_70_13, SCNPILOT_SOLID2_TRIM150_Actinobacteria_70_13, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

18141..20816
DNA (2676bp) protein (892aa)
hypothetical protein n=1 Tax=Dehalobacter sp. FTH1 RepID=UPI00037A1575
Putative oxidoreductase {ECO:0000313|EMBL:GAB48278.1}; TaxID=1089455 species="Bacteria; Actinobacteria; Micrococcales; Dermatophilaceae; Mobilicoccus.;" source="Mobilicoccus pelagius NBRC 104925.;"
putative nitrite reductase, copper-dependent
SCN18_26_2_15_R1_B_scaffold_375_22
SCNPILOT_CONT_500_BF_Actinomycetales_73_43, Cellulomonas, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

20870..21160
DNA (291bp) protein (97aa)
hypothetical protein n=1 Tax=Dehalobacter sp. FTH1 RepID=UPI00035EC3B7
hemerythrin hhE cation binding domain-containing protein
Hemerythrin HHE cation binding domain protein {ECO:0000313|EMBL:CCG05666.1}; TaxID=1146883 species="Bacteria; Actinobacteria; Geodermatophilales; Geodermatophilaceae; Blastococcus.;" source="Blastococcus saxobsidens (strain DD2).;"
SCN18_26_2_15_R1_B_scaffold_375_23
SCNPILOT_CONT_500_BF_Actinomycetales_73_43, Cellulomonas, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(21199..22296)
DNA (1098bp) protein (366aa)
hypothetical protein n=1 Tax=Dehalobacter sp. FTH1 RepID=UPI00037EDB76
mandelate racemase/muconate lactonizing protein
Tax=BJP_08E140C01_Actinomycetales_67_18
SCN18_26_2_15_R1_B_scaffold_375_24
CN-SCN_Gemmatimonadetes_22x, CN-SCN_Gemmatimonadetes_22x, CN-SCN_Gemmatimonadetes_22x, CN-SCN_Gemmatimonadetes_22x, Gemmatimonadetes, Bacteria

Not on your lists

comp(22284..23114)
DNA (831bp) protein (277aa)
hypothetical protein n=1 Tax=Dehalobacter sp. FTH1 RepID=UPI0003813E4B
beta-lactamase
Tax=BJP_08E140C01_Actinomycetales_67_18
SCN18_26_2_15_R1_B_scaffold_375_25
SCNPILOT_CONT_1000_P_Pseudonocardia_72_23, SCNPILOT_CONT_1000_P_Pseudonocardia_72_23, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(23184..24164)
DNA (981bp) protein (327aa)
hypothetical protein n=1 Tax=Dehalobacter sp. FTH1 RepID=UPI00037B76E8
peptide ABC transporter substrate-binding protein
Tax=BJP_08E140C01_Actinomycetales_67_18
SCN18_26_2_15_R1_B_scaffold_375_26
Pseudonocardia dioxanivorans_SCN_Pseudonocardia_26x, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(24173..25195)
DNA (1023bp) protein (341aa)
hypothetical protein n=1 Tax=Dehalobacter sp. FTH1 RepID=UPI0003737334
oligopeptide ABC transporter ATP-binding protein
Tax=BJP_08E140C01_Actinomycetales_70_11
SCN18_26_2_15_R1_B_scaffold_375_27
SCNPILOT_CONT_1000_P_Pseudonocardia_72_23, SCNPILOT_CONT_1000_P_Pseudonocardia_72_23, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(25195..26208)
DNA (1014bp) protein (338aa)
hypothetical protein n=1 Tax=Dehalobacter sp. FTH1 RepID=UPI000370D998
binding-protein-dependent transport systems inner membrane component
Tax=BJP_08E140C01_Actinomycetales_70_11
SCN18_26_2_15_R1_B_scaffold_375_28
SCNPILOT_EXPT_750_BF_Actinomycetales_70_150, SCNPILOT_EXPT_750_BF_Actinomycetales_70_150, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(26271..28001)
DNA (1731bp) protein (577aa)
hypothetical protein n=1 Tax=Dehalobacter sp. FTH1 RepID=UPI00037FF9E7
ABC transporter substrate-binding protein
Tax=BJP_08E140C01_Actinomycetales_70_11
SCN18_26_2_15_R1_B_scaffold_375_29
Pseudonocardia dioxanivorans_SCN_Pseudonocardia_26x, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(28048..29025)
DNA (978bp) protein (326aa)
hypothetical protein n=1 Tax=Dehalobacter sp. FTH1 RepID=UPI00038243BF
peptide ABC transporter permease
Tax=BJP_08E140C01_Actinomycetales_70_11
Displaying items 1-30 of 232 in total

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