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SCN18_26_2_15_R1_B_scaffold_581

Search features with annotation key words

Displaying items 1-30 of 58 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_26_2_15_R1_B_scaffold_581_1
SCNPILOT_SOLID2_TRIM150_Actinobacteria_70_13, SCNPILOT_SOLID2_TRIM150_Actinobacteria_70_13, SCNPILOT_SOLID2_TRIM150_Actinobacteria_70_13, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

3..1793
DNA (1791bp) protein (597aa)
hypothetical protein n=1 Tax=Dehalobacter sp. FTH1 RepID=UPI00036788C0
LuxR family two component transcriptional regulator
Two component transcriptional regulator, LuxR family {ECO:0000313|EMBL:ACZ31615.1}; TaxID=446471 species="Bacteria; Actinobacteria; Micrococcales; Promicromonosporaceae; Xylanimonas.;" source="Xylanimonas cellulosilytica (strain DSM 15894 / CECT 5975 / LMG 20990; / XIL07).;"
SCN18_26_2_15_R1_B_scaffold_581_2
Microbacterium ginsengisoli_SCNPILOT_CONT_1000_P_Microbacterium_71_138, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(2286..3014)
DNA (729bp) protein (243aa)
hypothetical protein n=1 Tax=Microbacterium sp. UCD-TDU RepID=UPI00034D53CC
Uncharacterized protein {ECO:0000313|EMBL:EYT60905.1}; TaxID=1247714 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. UCD-TDU.;"
putative RNA polymerase sigma factor
SCN18_26_2_15_R1_B_scaffold_581_3
Pseudonocardia dioxanivorans_SCN_Pseudonocardia_26x, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

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comp(3011..3697)
DNA (687bp) protein (229aa)
Peptidase C60, sortase A and B n=1 Tax=Janibacter hoylei PVAS-1 RepID=K1DYR1_9MICO
Peptidase C60, sortase A and B {ECO:0000313|EMBL:EKA59931.1}; TaxID=1210046 species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Janibacter.;" source="Janibacter hoylei PVAS-1.;"
peptidase C60, sortase A and B
SCN18_26_2_15_R1_B_scaffold_581_4
SCNPILOT_SOLID_1_TRIM150_Sphingobacteriales_39_21, SCNPILOT_SOLID_1_TRIM150_Sphingobacteriales_39_21, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

3922..5502
DNA (1581bp) protein (527aa)
Surface protein 26-residue repeat-containing protein n=1 Tax=Spirochaeta africana (strain ATCC 700263 / DSM 8902 / Z-7692) RepID=H9UI70_SPIAZ
surface protein 26-residue repeat-containing protein
Surface protein 26-residue repeat-containing protein {ECO:0000313|EMBL:AFG37213.1}; Flags: Precursor;; TaxID=889378 species="Bacteria; Spirochaetes; Spirochaetales; Spirochaetaceae; Spirochaeta.;" source="Spirochaeta africana (strain ATCC 700263 / DSM 8902 / Z-7692).;"
SCN18_26_2_15_R1_B_scaffold_581_5
unknown

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5532..6116
DNA (585bp) protein (195aa)

This feature has no annotations

SCN18_26_2_15_R1_B_scaffold_581_6
unknown

Not on your lists

6113..6811
DNA (699bp) protein (233aa)

This feature has no annotations

SCN18_26_2_15_R1_B_scaffold_581_7
SCNPILOT_SOLID2_TRIM150_Actinobacteria_70_13, SCNPILOT_SOLID2_TRIM150_Actinobacteria_70_13, SCNPILOT_SOLID2_TRIM150_Actinobacteria_70_13, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

6877..7494
DNA (618bp) protein (206aa)
Uncharacterized protein n=1 Tax=Brevibacterium casei S18 RepID=K9ATN7_9MICO
Uncharacterized protein {ECO:0000313|EMBL:EKU49391.1}; TaxID=1229781 species="Bacteria; Actinobacteria; Micrococcales; Brevibacteriaceae; Brevibacterium.;" source="Brevibacterium casei S18.;"
hypothetical protein
SCN18_26_2_15_R1_B_scaffold_581_8
Microbacterium ginsengisoli_SCNPILOT_CONT_1000_P_Microbacterium_71_138, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

7652..8149
DNA (498bp) protein (166aa)
signal peptidase I n=1 Tax=Yaniella halotolerans RepID=UPI0003B7B5BA
peptidase S26B, signal peptidase
Peptidase S26B, signal peptidase {ECO:0000313|EMBL:ADG75524.1}; Flags: Precursor;; TaxID=446466 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Cellulomonas.;" source="Cellulomonas flavigena (strain ATCC 482 / DSM 20109 / NCIB 8073 / NRS; 134).;"
SCN18_26_2_15_R1_B_scaffold_581_9
Brevibacterium casei, Brevibacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

8146..8799
DNA (654bp) protein (218aa)
Uncharacterized protein n=1 Tax=Brevibacterium casei S18 RepID=K9B6R9_9MICO
Uncharacterized protein {ECO:0000313|EMBL:EKU49395.1}; TaxID=1229781 species="Bacteria; Actinobacteria; Micrococcales; Brevibacteriaceae; Brevibacterium.;" source="Brevibacterium casei S18.;"
hypothetical protein
SCN18_26_2_15_R1_B_scaffold_581_10
SCNPILOT_CONT_500_BF_Cellulomonas_73_12_partial, Cellulomonas, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

9034..9783
DNA (750bp) protein (250aa)
Sortase family protein n=1 Tax=Kineococcus radiotolerans (strain ATCC BAA-149 / DSM 14245 / SRS30216) RepID=A6W3Y0_KINRD
sortase family protein
Tax=BJP_08E140C01_Actinomycetales_70_11
SCN18_26_2_15_R1_B_scaffold_581_11
SCNPILOT_EXPT_1000_BF_Actinomycetales_Beutenbergia_73_13, SCNPILOT_EXPT_1000_BF_Actinomycetales_Beutenbergia_73_13, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

9783..9947
DNA (165bp) protein (55aa)
Uncharacterized protein n=1 Tax=Cellvibrio gilvus (strain ATCC 13127 / NRRL B-14078) RepID=F8A240_CELGA
hypothetical protein
Tax=BJP_08E140C01_Actinomycetales_70_11
SCN18_26_2_15_R1_B_scaffold_581_12
Pseudonocardia dioxanivorans_SCN_Pseudonocardia_26x, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

10013..12223
DNA (2211bp) protein (737aa)
ATP-dependent DNA helicase RecG (EC:3.6.1.-)
hypothetical protein n=1 Tax=Dehalobacter sp. FTH1 RepID=UPI0003629F1B
Tax=BJP_08E140C01_Actinomycetales_67_18
SCN18_26_2_15_R1_B_scaffold_581_13
Pseudonocardia dioxanivorans_SCN_Pseudonocardia_26x, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

12263..12847
DNA (585bp) protein (195aa)
RNA methyltransferase (EC:2.1.1.-)
hypothetical protein n=1 Tax=Dehalobacter sp. FTH1 RepID=UPI00036AE3F6
Tax=BJP_08E140C01_Actinomycetales_67_18
SCN18_26_2_15_R1_B_scaffold_581_14
SCNPILOT_CONT_500_P_Xanthomonadales_69_150, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12841..13332
DNA (492bp) protein (164aa)
coaD; phosphopantetheine adenylyltransferase (EC:2.7.7.3)
hypothetical protein n=1 Tax=Dehalobacter sp. FTH1 RepID=UPI000371B222
Tax=BJP_08E140C01_Actinomycetales_67_18
SCN18_26_2_15_R1_B_scaffold_581_15
SCNPILOT_CONT_500_BF_Actinomycetales_73_43, Cellulomonas, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

13325..13825
DNA (501bp) protein (167aa)
hypothetical protein n=1 Tax=Dehalobacter sp. FTH1 RepID=UPI000364F4D0
hypothetical protein
Tax=BJP_08E140C01_Actinomycetales_67_18
SCN18_26_2_15_R1_B_scaffold_581_16
SCNPILOT_CONT_500_BF_Cellulomonas_73_12_partial, Cellulomonas, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

13983..14468
DNA (486bp) protein (162aa)
hypothetical protein n=1 Tax=Dehalobacter sp. FTH1 RepID=UPI00036D477E
hypothetical protein
Tax=BJP_08E140C01_Actinomycetales_67_18
SCN18_26_2_15_R1_B_scaffold_581_17
SCNPILOT_CONT_1000_P_Pseudonocardia_72_23, SCNPILOT_CONT_1000_P_Pseudonocardia_72_23, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


14473..14664
DNA (192bp) protein (64aa)
50S ribosomal protein L32 n=1 Tax=Propionimicrobium lymphophilum ACS-093-V-SCH5 RepID=S2WZW6_9ACTO
rpmF; 50S ribosomal protein L32
Tax=BJP_08E140C01_Actinomycetales_67_18
SCN18_26_2_15_R1_B_scaffold_581_18
SCNPILOT_CONT_1000_P_Pseudonocardia_72_23, SCNPILOT_CONT_1000_P_Pseudonocardia_72_23, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

14694..15413
DNA (720bp) protein (240aa)
rnc; ribonuclease III (EC:3.1.26.3)
hypothetical protein n=1 Tax=Dehalobacter sp. FTH1 RepID=UPI00036F03BB
Tax=BJP_08E140C01_Actinomycetales_67_18
SCN18_26_2_15_R1_B_scaffold_581_19
SCNPILOT_SOLID2_TRIM150_Actinobacteria_69_241, SCNPILOT_SOLID2_TRIM150_Actinobacteria_69_241, SCNPILOT_SOLID2_TRIM150_Actinobacteria_69_241, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

15406..16284
DNA (879bp) protein (293aa)
formamidopyrimidine-DNA glycosylase (EC:3.2.2.23)
hypothetical protein n=1 Tax=Dehalobacter sp. FTH1 RepID=UPI00036F892B
Tax=BJP_08E140C01_Actinomycetales_70_11
SCN18_26_2_15_R1_B_scaffold_581_20
SCNPILOT_EXPT_1000_BF_Actinomycetales_Beutenbergia_73_13, SCNPILOT_EXPT_1000_BF_Actinomycetales_Beutenbergia_73_13, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

16281..16844
DNA (564bp) protein (188aa)
hypothetical protein n=1 Tax=Dehalobacter sp. FTH1 RepID=UPI0003769D6A
GtrA-like protein
Tax=BJP_08E140C01_Actinomycetales_70_11
SCN18_26_2_15_R1_B_scaffold_581_21
SCNPILOT_CONT_500_BF_Cellulomonas_73_12_partial, Cellulomonas, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

16845..20384
DNA (3540bp) protein (1180aa)
hypothetical protein n=1 Tax=Dehalobacter sp. FTH1 RepID=UPI00037B38FA
smc; chromosome partition protein SMC
Tax=BJP_08E140C01_Actinomycetales_67_18
SCN18_26_2_15_R1_B_scaffold_581_22
BJP_08E140C01_Actinomycetales_67_18, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

Not on your lists

20463..20738
DNA (276bp) protein (92aa)
hypothetical protein n=1 Tax=Dehalobacter sp. FTH1 RepID=UPI0003798A39
Tax=BJP_08E140C01_Actinomycetales_67_18
SCN18_26_2_15_R1_B_scaffold_581_23
SCNPILOT_CONT_500_BF_Cellulomonas_73_12_partial, Cellulomonas, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

20786..21946
DNA (1161bp) protein (387aa)
hypothetical protein n=1 Tax=Dehalobacter sp. FTH1 RepID=UPI00035F4F83
ftsY; signal recognition particle-docking protein FtsY
Tax=BJP_08E140C01_Actinomycetales_70_11
SCN18_26_2_15_R1_B_scaffold_581_24
Dyadobacter fermentans_SCNpilot_P_inoc_Dyadobacter_48_40, Dyadobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

21951..22442
DNA (492bp) protein (164aa)
hypothetical protein n=1 Tax=Dehalobacter sp. FTH1 RepID=UPI00036ACCF3
acetyltransferase
Tax=BJP_08E140C01_Actinomycetales_70_11
SCN18_26_2_15_R1_B_scaffold_581_25
unknown

Not on your lists

22459..22563
DNA (105bp) protein (35aa)

This feature has no annotations

SCN18_26_2_15_R1_B_scaffold_581_26
Pseudonocardia dioxanivorans_SCN_Pseudonocardia_26x, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


22645..24207
DNA (1563bp) protein (521aa)
hypothetical protein n=1 Tax=Dehalobacter sp. FTH1 RepID=UPI000364B468
ffh; signal recognition particle protein
Tax=BJP_08E140C01_Actinomycetales_67_18
SCN18_26_2_15_R1_B_scaffold_581_27
SCNPILOT_CONT_1000_BF_Actinobacteria_69_20, SCNPILOT_CONT_1000_BF_Actinobacteria_69_20, SCNPILOT_CONT_1000_BF_Actinobacteria_69_20, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(24391..26250)
DNA (1860bp) protein (620aa)
hypothetical protein n=1 Tax=Dehalobacter sp. FTH1 RepID=UPI00036DD317
Na+/H+ antiporter
Tax=BJP_08E140C01_Actinomycetales_70_11
SCN18_26_2_15_R1_B_scaffold_581_28
Singulisphaera acidiphila_SCNPILOT_SOLID2_TRIM150_Singulisphaera_70_9, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

26378..26995
DNA (618bp) protein (206aa)
hypothetical protein n=1 Tax=Dehalobacter sp. FTH1 RepID=UPI000364CA64
sig10; RNA polymerase sigma factor
Tax=BJP_08E140C01_Actinomycetales_67_18
SCN18_26_2_15_R1_B_scaffold_581_29
SCNpilot_P_inoc_Acidovorax_64_34, SCNpilot_P_inoc_Acidovorax_64_34, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26988..29036
DNA (2049bp) protein (683aa)
hypothetical protein n=1 Tax=Dehalobacter sp. FTH1 RepID=UPI00037C3CBA
hypothetical protein
Tax=BJP_08E140C01_Actinomycetales_67_18
SCN18_26_2_15_R1_B_scaffold_581_30
SCNPILOT_CONT_1000_P_Pseudonocardia_72_23, SCNPILOT_CONT_1000_P_Pseudonocardia_72_23, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

29080..30279
DNA (1200bp) protein (400aa)
hypothetical protein n=1 Tax=Dehalobacter sp. FTH1 RepID=UPI0003672556
amidohydrolase
Tax=BJP_08E140C01_Actinomycetales_67_18
Displaying items 1-30 of 58 in total

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