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SCN18_26_2_15_R1_B_scaffold_9043

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Displaying 8 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_26_2_15_R1_B_scaffold_9043_1
SCNPILOT_CONT_300_BF_Rhizobiales_67_6_partial, SCNPILOT_CONT_300_BF_Rhizobiales_67_6_partial, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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1..231
DNA (231bp) protein (77aa)
Crossover junction endodeoxyribonuclease RuvC {ECO:0000256|HAMAP-Rule:MF_00034, ECO:0000256|SAAS:SAAS00106335}; EC=3.1.22.4 {ECO:0000256|HAMAP-Rule:MF_00034, ECO:0000256|SAAS:SAAS00106388};; Holliday junction nuclease RuvC {ECO:0000256|HAMAP-Rule:MF_00034}; Holliday junction resolvase RuvC {ECO:0000256|HAMAP-Rule:MF_00034}; TaxID=1189611 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Nitratireductor.;" source="Nitratireductor aquibiodomus RA22.;"
hypothetical protein n=1 Tax=Kaistia granuli RepID=UPI000369BDAF
ruvC; Crossover junction endodeoxyribonuclease ruvC
SCN18_26_2_15_R1_B_scaffold_9043_2
CN-SCN_Mesorhizobium_20x, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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311..559
DNA (249bp) protein (83aa)
Transcriptional regulator, AbrB family n=1 Tax=Geobacter uraniireducens (strain Rf4) RepID=A5G6B7_GEOUR
AbrB family transcriptional regulator {ECO:0000313|EMBL:KGN34853.1}; TaxID=1385520 species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Knoellia.;" source="Knoellia sinensis KCTC 19936.;"
AbrB family transcriptional regulator
SCN18_26_2_15_R1_B_scaffold_9043_3
SCNPILOT_EXPT_750_BF_Actinomycetales_70_150, SCNPILOT_EXPT_750_BF_Actinomycetales_70_150, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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552..968
DNA (417bp) protein (139aa)
Uncharacterized protein n=1 Tax=Hoeflea phototrophica DFL-43 RepID=A9D142_9RHIZ
DNA-binding protein {ECO:0000313|EMBL:KGF68396.1}; TaxID=1547437 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Hoeflea.;" source="Hoeflea sp. BAL378.;"
PilT domain-containing protein
SCN18_26_2_15_R1_B_scaffold_9043_4
SCNPILOT_CONT_300_BF_Rhizobiales_67_6_partial, SCNPILOT_CONT_300_BF_Rhizobiales_67_6_partial, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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965..1582
DNA (618bp) protein (206aa)
Holliday junction ATP-dependent DNA helicase RuvA {ECO:0000255|HAMAP-Rule:MF_00031}; EC=3.6.4.12 {ECO:0000255|HAMAP-Rule:MF_00031};; TaxID=460265 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium nodulans (strain ORS2060 / LMG 21967).;"
Holliday junction DNA helicase RuvA n=1 Tax=Kaistia granuli RepID=UPI000368DB7B
ruvA; Holliday junction DNA helicase RuvA
SCN18_26_2_15_R1_B_scaffold_9043_5
SCNPILOT_CONT_300_BF_Rhizobiales_67_6_partial, SCNPILOT_CONT_300_BF_Rhizobiales_67_6_partial, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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1579..2025
DNA (447bp) protein (149aa)
SCN18_26_2_15_R1_B_scaffold_9043_6
SCNPILOT_CONT_300_BF_Rhizobiales_67_6_partial, SCNPILOT_CONT_300_BF_Rhizobiales_67_6_partial, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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2022..2486
DNA (465bp) protein (155aa)
hypothetical protein n=1 Tax=Kaistia granuli RepID=UPI0003714086
SCN18_26_2_15_R1_B_scaffold_9043_7
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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2483..3520
DNA (1038bp) protein (346aa)
Holliday junction DNA helicase RuvB n=1 Tax=Kaistia granuli RepID=UPI00037F72E2
Uncharacterized protein {ECO:0000313|EMBL:KKN85592.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
Holliday junction DNA helicase RuvB
SCN18_26_2_15_R1_B_scaffold_9043_8
unknown

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3517..3585
DNA (69bp) protein (23aa)

This feature has no annotations

Displaying 8 items

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