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SCN18_26_2_15_R1_F_scaffold_0

Search features with annotation key words

Displaying items 1-30 of 1666 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_26_2_15_R1_F_scaffold_0_trna_17
unknown

Not on your lists

comp(497..570)
DNA (74bp)
transferRNA Met
SCN18_26_2_15_R1_F_scaffold_0_1
SCNPILOT_EXPT_300_BF_Thiobacillus_62_448, SCNPILOT_EXPT_300_BF_Thiobacillus_62_448, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

733..2034
DNA (1302bp) protein (434aa)
iron-containing alcohol dehydrogenase; K00001 alcohol dehydrogenase [EC:1.1.1.1] id=12494473 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
iron-containing alcohol dehydrogenase
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
SCN18_26_2_15_R1_F_scaffold_0_2
SCNPILOT_EXPT_300_BF_Thiobacillus_62_448, SCNPILOT_EXPT_300_BF_Thiobacillus_62_448, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2099..2671
DNA (573bp) protein (191aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI0003678E2A
LemA family
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
SCN18_26_2_15_R1_F_scaffold_0_3
SCNPILOT_EXPT_300_BF_Thiobacillus_62_448, SCNPILOT_EXPT_300_BF_Thiobacillus_62_448, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2671..3579
DNA (909bp) protein (303aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI00037B8EE6
hypothetical protein
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
SCN18_26_2_15_R1_F_scaffold_0_4
SCNPILOT_EXPT_300_BF_Thiobacillus_62_448, SCNPILOT_EXPT_300_BF_Thiobacillus_62_448, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3632..3907
DNA (276bp) protein (92aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI000371B4B0
hypothetical protein
Tax=GWE1_Thiobacillus_62_9_curated
SCN18_26_2_15_R1_F_scaffold_0_5
SCNPILOT_EXPT_300_BF_Thiobacillus_62_448, SCNPILOT_EXPT_300_BF_Thiobacillus_62_448, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3889..4338)
DNA (450bp) protein (150aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI00036E73F7
hypothetical protein
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
SCN18_26_2_15_R1_F_scaffold_0_6
SCNPILOT_EXPT_300_BF_Thiobacillus_62_448, SCNPILOT_EXPT_300_BF_Thiobacillus_62_448, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4339..5799)
DNA (1461bp) protein (487aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI0003762D84
flavodoxin oxidoreductase
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
SCN18_26_2_15_R1_F_scaffold_0_7
SCNPILOT_EXPT_300_BF_Thiobacillus_62_448, SCNPILOT_EXPT_300_BF_Thiobacillus_62_448, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5902..7656
DNA (1755bp) protein (585aa)
exonuclease RecJ (EC:3.1.-.-)
single-stranded DNA exonuclease n=1 Tax=Thiobacillus thioparus RepID=UPI0003649E06
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
SCN18_26_2_15_R1_F_scaffold_0_8
SCNPILOT_EXPT_300_BF_Thiobacillus_62_448, SCNPILOT_EXPT_300_BF_Thiobacillus_62_448, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7762..8355
DNA (594bp) protein (198aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI00035DA610
hypothetical protein
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
SCN18_26_2_15_R1_F_scaffold_0_9
SCNPILOT_EXPT_300_BF_Thiobacillus_62_448, SCNPILOT_EXPT_300_BF_Thiobacillus_62_448, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8402..8773)
DNA (372bp) protein (124aa)
Uncharacterized protein id=4443887 bin=GWA2_Deltaproteo_65_63 species=mine drainage metagenome genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Deltaproteo_65_63 organism_group=Deltaproteobacteria
hypothetical protein
Tax=GWA2_Deltaproteobacteria_65_63_curated
SCN18_26_2_15_R1_F_scaffold_0_10
SCNPILOT_EXPT_300_BF_Thiobacillus_62_448, SCNPILOT_EXPT_300_BF_Thiobacillus_62_448, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8770..9003)
DNA (234bp) protein (78aa)
Uncharacterized protein id=1700079 bin=GWB2_Deltaproteobacteria_65_81 species=mine drainage metagenome genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWB2_Deltaproteobacteria_65_81 organism_group=Deltaproteobacteria organism_desc=Good +
hypothetical protein
Tax=GWA2_Deltaproteobacteria_65_63_curated
SCN18_26_2_15_R1_F_scaffold_0_11
SCNPILOT_EXPT_300_BF_Thiobacillus_62_448, SCNPILOT_EXPT_300_BF_Thiobacillus_62_448, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9132..10172)
DNA (1041bp) protein (347aa)
UDP-galactose 4-epimerase (EC:5.1.3.2)
UDP-glucose 4-epimerase n=1 Tax=Thiobacillus thioparus RepID=UPI000369510D
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
SCN18_26_2_15_R1_F_scaffold_0_12
SCNPILOT_EXPT_300_BF_Thiobacillus_62_448, SCNPILOT_EXPT_300_BF_Thiobacillus_62_448, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10218..10499)
DNA (282bp) protein (94aa)
Transcriptional regulator, XRE family n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q02AH6_SOLUE
XRE family transcriptional regulator
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
SCN18_26_2_15_R1_F_scaffold_0_13
SCNPILOT_EXPT_300_BF_Thiobacillus_62_448, SCNPILOT_EXPT_300_BF_Thiobacillus_62_448, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10496..10822)
DNA (327bp) protein (109aa)
Uncharacterized protein n=5 Tax=Xylella fastidiosa RepID=B2I506_XYLF2
hypothetical protein
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
SCN18_26_2_15_R1_F_scaffold_0_14
SCNPILOT_EXPT_300_BF_Thiobacillus_62_448, SCNPILOT_EXPT_300_BF_Thiobacillus_62_448, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10886..11776)
DNA (891bp) protein (297aa)
dTDP-4-dehydrorhamnose reductase (EC:1.1.1.133)
dTDP-4-dehydrorhamnose reductase n=1 Tax=Thiobacillus thioparus RepID=UPI0003746292
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
SCN18_26_2_15_R1_F_scaffold_0_15
SCNPILOT_EXPT_300_BF_Thiobacillus_62_448, SCNPILOT_EXPT_300_BF_Thiobacillus_62_448, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11773..12315)
DNA (543bp) protein (181aa)
dTDP-4-dehydrorhamnose 3,5-epimerase (EC:5.1.3.13)
dTDP-4-dehydrorhamnose 3,5-epimerase n=1 Tax=Thiobacillus thioparus RepID=UPI00036F609D
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
SCN18_26_2_15_R1_F_scaffold_0_16
SCNPILOT_EXPT_300_BF_Thiobacillus_62_448, SCNPILOT_EXPT_300_BF_Thiobacillus_62_448, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12463..13407)
DNA (945bp) protein (315aa)
glucose-1-phosphate thymidylyltransferase (EC:2.7.7.24)
glucose-1-phosphate thymidylyltransferase n=1 Tax=Thiobacillus thioparus RepID=UPI00035FD75E
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
SCN18_26_2_15_R1_F_scaffold_0_17
SCNPILOT_EXPT_300_BF_Thiobacillus_62_448, SCNPILOT_EXPT_300_BF_Thiobacillus_62_448, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13404..13766)
DNA (363bp) protein (121aa)
Uncharacterized protein n=1 Tax=Methylomicrobium alcaliphilum (strain DSM 19304 / NCIMB 14124 / VKM B-2133 / 20Z) RepID=G4T2E5_META2
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCE23585.1}; TaxID=1091494 species="Bacteria; Proteobacteria; Gammaproteobacteria; Methylococcales; Methylococcaceae; Methylomicrobium.;" source="Methylomicrobium alcaliphilum (strain DSM 19304 / NCIMB 14124 / VKM; B-2133 / 20Z).;"
SCN18_26_2_15_R1_F_scaffold_0_18
SCNPILOT_EXPT_300_BF_Thiobacillus_62_448, SCNPILOT_EXPT_300_BF_Thiobacillus_62_448, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13786..14832)
DNA (1047bp) protein (349aa)
dTDP-glucose 4,6-dehydratase (EC:4.2.1.46)
dTDP-glucose 4,6-dehydratase {ECO:0000256|RuleBase:RU004473}; EC=4.2.1.46 {ECO:0000256|RuleBase:RU004473};; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus denitrificans (strain ATCC 25259).;"
dTDP-glucose 4,6-dehydratase n=1 Tax=Thiobacillus thioparus RepID=UPI0003602592
SCN18_26_2_15_R1_F_scaffold_0_19
SCNPILOT_EXPT_300_BF_Thiobacillus_62_448, SCNPILOT_EXPT_300_BF_Thiobacillus_62_448, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15006..16133)
DNA (1128bp) protein (376aa)
hypothetical protein n=1 Tax=Methylotenera sp. 1P/1 RepID=UPI00038219E6
group 1 glycosyl transferase
Tax=BJP_IG2103_Dechloromonas_63_51
SCN18_26_2_15_R1_F_scaffold_0_20
SCNPILOT_EXPT_300_BF_Thiobacillus_62_448, SCNPILOT_EXPT_300_BF_Thiobacillus_62_448, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16169..17302)
DNA (1134bp) protein (378aa)
hypothetical protein n=1 Tax=Bradyrhizobium elkanii RepID=UPI00037D0322
Uncharacterized protein {ECO:0000313|EMBL:KIZ39707.1}; TaxID=1076 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris.;"
Predicted Fe-S oxidoreductases
SCN18_26_2_15_R1_F_scaffold_0_21
SCNPILOT_EXPT_300_BF_Thiobacillus_62_448, SCNPILOT_EXPT_300_BF_Thiobacillus_62_448, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17327..18532)
DNA (1206bp) protein (402aa)
hypothetical protein n=1 Tax=Bradyrhizobium elkanii RepID=UPI000315C15D
putative glycosyl transferase group 1
Tax=BJP_IG2103_Dechloromonas_63_51
SCN18_26_2_15_R1_F_scaffold_0_22
SCNPILOT_EXPT_300_BF_Thiobacillus_62_448, SCNPILOT_EXPT_300_BF_Thiobacillus_62_448, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18598..19764)
DNA (1167bp) protein (389aa)
Putative glycosyltransferase n=1 Tax=Candidatus Methanomassiliicoccus intestinalis Issoire-Mx1 RepID=R9T7Z5_9EURY
putative glycosyltransferase
Tax=RBG_13_Deltaproteobacteria_61_14_curated
SCN18_26_2_15_R1_F_scaffold_0_23
SCNPILOT_EXPT_300_BF_Thiobacillus_62_448, SCNPILOT_EXPT_300_BF_Thiobacillus_62_448, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19772..20863)
DNA (1092bp) protein (364aa)
hypothetical protein n=1 Tax=Methylotenera sp. 1P/1 RepID=UPI000375F50C
Glycosyltransferase {ECO:0000313|EMBL:EUJ11295.1}; TaxID=1101195 species="Bacteria; Proteobacteria; Betaproteobacteria; Methylophilales; Methylophilaceae.;" source="Methylophilaceae bacterium 11.;"
group 1 glycosyl transferase
SCN18_26_2_15_R1_F_scaffold_0_24
SCNPILOT_EXPT_300_BF_Thiobacillus_62_448, SCNPILOT_EXPT_300_BF_Thiobacillus_62_448, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20860..23145)
DNA (2286bp) protein (762aa)
Putative uncharacterized protein n=1 Tax=Burkholderiales bacterium JOSHI_001 RepID=H5WJD3_9BURK
Tax=RIFCSPHIGHO2_01_FULL_RIF_OD1_09_51_10_curated
SCN18_26_2_15_R1_F_scaffold_0_25
SCNPILOT_EXPT_300_BF_Thiobacillus_62_448, SCNPILOT_EXPT_300_BF_Thiobacillus_62_448, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23142..23903)
DNA (762bp) protein (254aa)
Putative glycosyltransferase n=1 Tax=Burkholderiales bacterium JOSHI_001 RepID=H5WJC6_9BURK
Putative glycosyltransferase {ECO:0000313|EMBL:EHR70147.1}; TaxID=864051 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales.;" source="Burkholderiales bacterium JOSHI_001.;"
glycosyl transferase family protein
SCN18_26_2_15_R1_F_scaffold_0_26
SCNPILOT_EXPT_300_BF_Thiobacillus_62_448, SCNPILOT_EXPT_300_BF_Thiobacillus_62_448, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23920..24810)
DNA (891bp) protein (297aa)
Tax=CG_Rhodocyc_01
SCN18_26_2_15_R1_F_scaffold_0_27
SCNPILOT_EXPT_300_BF_Thiobacillus_62_448, SCNPILOT_EXPT_300_BF_Thiobacillus_62_448, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24992..25807)
DNA (816bp) protein (272aa)
Glycosyl transferase, family 2 n=1 Tax=uncultured bacterium RepID=K2CQA8_9BACT
Glycosyl transferase, family 2 {ECO:0000313|EMBL:EKD95370.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
hypothetical protein
SCN18_26_2_15_R1_F_scaffold_0_28
SCNPILOT_EXPT_300_BF_Thiobacillus_62_448, SCNPILOT_EXPT_300_BF_Thiobacillus_62_448, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25848..26807)
DNA (960bp) protein (320aa)
Uncharacterized protein n=1 Tax=Cupriavidus sp. HPC(L) RepID=V2JF76_9BURK
Uncharacterized protein {ECO:0000313|EMBL:ESJ25675.1}; TaxID=1217418 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Cupriavidus.;" source="Cupriavidus sp. HPC(L).;"
hypothetical protein
SCN18_26_2_15_R1_F_scaffold_0_29
SCNPILOT_EXPT_300_BF_Thiobacillus_62_448, SCNPILOT_EXPT_300_BF_Thiobacillus_62_448, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26804..28315)
DNA (1512bp) protein (504aa)
hypothetical protein n=1 Tax=Massilia niastensis RepID=UPI00036F0331
Uncharacterized protein {ECO:0000313|EMBL:EKU80715.1}; TaxID=883126 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia timonae CCUG 45783.;"
polysaccharide biosynthesis protein
Displaying items 1-30 of 1666 in total

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