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SCN18_26_2_15_R1_F_scaffold_497

Search features with annotation key words

Displaying items 1-30 of 57 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_26_2_15_R1_F_scaffold_497_1
SCNPILOT_EXPT_300_BF_Thiobacillus_62_448, SCNPILOT_EXPT_300_BF_Thiobacillus_62_448, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1..252
DNA (252bp) protein (84aa)
tuf; elongation factor Tu (EC:3.6.5.3)
tuf; elongation factor Tu (EC:3.6.5.3); K02358 elongation factor Tu id=12495325 bin=THIO_HI species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
Tax=GWE1_Thiobacillus_62_9_curated
SCN18_26_2_15_R1_F_scaffold_497_2
SCNPILOT_EXPT_300_BF_Thiobacillus_62_448, SCNPILOT_EXPT_300_BF_Thiobacillus_62_448, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


262..570
DNA (309bp) protein (103aa)
id=12498442 bin=THIO_MID tax=THIO_MID organism_group=Betaproteobacteria
rpsJ; 30S ribosomal protein S10
30S ribosomal protein S10 {ECO:0000255|HAMAP-Rule:MF_00508}; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus denitrificans (strain ATCC 25259).;"
SCN18_26_2_15_R1_F_scaffold_497_3
SCNPILOT_EXPT_300_BF_Thiobacillus_62_448, SCNPILOT_EXPT_300_BF_Thiobacillus_62_448, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


696..1340
DNA (645bp) protein (215aa)
50S ribosomal protein L3 n=1 Tax=Thiobacillus thioparus RepID=UPI000362CC67
50S ribosomal protein L3P
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
SCN18_26_2_15_R1_F_scaffold_497_4
SCNPILOT_EXPT_300_BF_Thiobacillus_62_448, SCNPILOT_EXPT_300_BF_Thiobacillus_62_448, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


1340..1957
DNA (618bp) protein (206aa)
50S ribosomal protein L4 id=1308461 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
rplD; 50S ribosomal protein L4
Tax=GWE1_Thiobacillus_62_9_curated
SCN18_26_2_15_R1_F_scaffold_497_5
SCNPILOT_EXPT_300_BF_Thiobacillus_62_448, SCNPILOT_EXPT_300_BF_Thiobacillus_62_448, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


1957..2262
DNA (306bp) protein (102aa)
50S ribosomal protein L23 n=1 Tax=Thiobacillus thioparus RepID=UPI00036FEBD3
50S ribosomal protein L23
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
SCN18_26_2_15_R1_F_scaffold_497_6
SCNPILOT_EXPT_300_BF_Thiobacillus_62_448, SCNPILOT_EXPT_300_BF_Thiobacillus_62_448, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


2274..3101
DNA (828bp) protein (276aa)
50S ribosomal protein L2 n=1 Tax=Thiobacillus thioparus RepID=UPI00037A091A
rplB; 50S ribosomal protein L2
50S ribosomal protein L2 {ECO:0000255|HAMAP-Rule:MF_01320}; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus denitrificans (strain ATCC 25259).;"
SCN18_26_2_15_R1_F_scaffold_497_7
SCNPILOT_EXPT_300_BF_Thiobacillus_62_448, SCNPILOT_EXPT_300_BF_Thiobacillus_62_448, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


3117..3392
DNA (276bp) protein (92aa)
30S ribosomal protein S19 n=1 Tax=Thiobacillus denitrificans RepID=UPI0003734CF2
rpsS; 30S ribosomal protein S19
Tax=GWE1_Thiobacillus_62_9_curated
SCN18_26_2_15_R1_F_scaffold_497_8
SCNPILOT_EXPT_300_BF_Thiobacillus_62_448, SCNPILOT_EXPT_300_BF_Thiobacillus_62_448, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


3403..3732
DNA (330bp) protein (110aa)
50S ribosomal protein L22 n=1 Tax=Thiobacillus thioparus RepID=UPI00036065C3
50S ribosomal protein L22
50S ribosomal protein L22 {ECO:0000255|HAMAP-Rule:MF_01331}; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus denitrificans (strain ATCC 25259).;"
SCN18_26_2_15_R1_F_scaffold_497_9
SCNPILOT_EXPT_300_BF_Thiobacillus_62_448, SCNPILOT_EXPT_300_BF_Thiobacillus_62_448, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


3742..4446
DNA (705bp) protein (235aa)
30S ribosomal protein S3 n=1 Tax=Thiobacillus thioparus RepID=UPI00036504F8
rpsC; 30S ribosomal protein S3
30S ribosomal protein S3 {ECO:0000255|HAMAP-Rule:MF_01309}; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus denitrificans (strain ATCC 25259).;"
SCN18_26_2_15_R1_F_scaffold_497_10
SCNPILOT_EXPT_300_BF_Thiobacillus_62_448, SCNPILOT_EXPT_300_BF_Thiobacillus_62_448, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


4430..4846
DNA (417bp) protein (139aa)
50S ribosomal protein L16 n=1 Tax=Thiobacillus thioparus RepID=UPI0003690D45
rplP; 50S ribosomal protein L16
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
SCN18_26_2_15_R1_F_scaffold_497_11
SCNPILOT_EXPT_300_BF_Thiobacillus_62_448, SCNPILOT_EXPT_300_BF_Thiobacillus_62_448, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


4850..5044
DNA (195bp) protein (65aa)
50S ribosomal protein L29 n=1 Tax=Thiobacillus thioparus RepID=UPI00037A7A7A
50S ribosomal protein L29
Tax=GWE1_Thiobacillus_62_9_curated
SCN18_26_2_15_R1_F_scaffold_497_12
SCNPILOT_EXPT_300_BF_Thiobacillus_62_448, SCNPILOT_EXPT_300_BF_Thiobacillus_62_448, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


5041..5304
DNA (264bp) protein (88aa)
30S ribosomal protein S17 n=1 Tax=Thiobacillus thioparus RepID=UPI00036439D6
rpsQ; 30S ribosomal protein S17
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
SCN18_26_2_15_R1_F_scaffold_497_13
SCNPILOT_EXPT_300_BF_Thiobacillus_62_448, SCNPILOT_EXPT_300_BF_Thiobacillus_62_448, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


5471..5839
DNA (369bp) protein (123aa)
50S ribosomal protein L14 id=1336995 bin=GWE1_T_denit_62_9 species=unknown genus=unknown taxon_order=unknown taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
rplN; 50S ribosomal protein L14
Tax=GWE1_Thiobacillus_62_9_curated
SCN18_26_2_15_R1_F_scaffold_497_14
SCNPILOT_EXPT_300_BF_Thiobacillus_62_448, SCNPILOT_EXPT_300_BF_Thiobacillus_62_448, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


5849..6172
DNA (324bp) protein (108aa)
50S ribosomal protein L24 n=1 Tax=Thiobacillus thioparus RepID=UPI000376297B
50S ribosomal protein L24
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
SCN18_26_2_15_R1_F_scaffold_497_15
SCNPILOT_EXPT_300_BF_Thiobacillus_62_448, SCNPILOT_EXPT_300_BF_Thiobacillus_62_448, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


6175..6714
DNA (540bp) protein (180aa)
50S ribosomal protein L5 n=1 Tax=Thiobacillus thioparus RepID=UPI0003704C36
rplE; 50S ribosomal protein L5
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
SCN18_26_2_15_R1_F_scaffold_497_16
SCNPILOT_EXPT_300_BF_Thiobacillus_62_448, SCNPILOT_EXPT_300_BF_Thiobacillus_62_448, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


6722..7027
DNA (306bp) protein (102aa)
30S ribosomal protein S14 n=1 Tax=Thiobacillus thioparus RepID=UPI00037C4C51
rpsN; 30S ribosomal protein S14
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
SCN18_26_2_15_R1_F_scaffold_497_17
SCNPILOT_EXPT_300_BF_Thiobacillus_62_448, SCNPILOT_EXPT_300_BF_Thiobacillus_62_448, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


7040..7435
DNA (396bp) protein (132aa)
30S ribosomal protein S8 n=1 Tax=Thiobacillus thioparus RepID=UPI00037C5C8A
30S ribosomal protein S8
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
SCN18_26_2_15_R1_F_scaffold_497_18
SCNPILOT_EXPT_300_BF_Thiobacillus_62_448, SCNPILOT_EXPT_300_BF_Thiobacillus_62_448, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


7448..7978
DNA (531bp) protein (177aa)
50S ribosomal protein L6 n=1 Tax=Thiobacillus thioparus RepID=UPI0003673018
rplF; 50S ribosomal protein L6
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
SCN18_26_2_15_R1_F_scaffold_497_19
SCNPILOT_EXPT_300_BF_Thiobacillus_62_448, SCNPILOT_EXPT_300_BF_Thiobacillus_62_448, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


7995..8348
DNA (354bp) protein (118aa)
50S ribosomal protein L18 n=1 Tax=Thiobacillus thioparus RepID=UPI000363996E
50S ribosomal protein L18
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
SCN18_26_2_15_R1_F_scaffold_497_20
SCNPILOT_EXPT_300_BF_Thiobacillus_62_448, SCNPILOT_EXPT_300_BF_Thiobacillus_62_448, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


8364..8879
DNA (516bp) protein (172aa)
30S ribosomal protein S5 n=1 Tax=Thiobacillus thioparus RepID=UPI00036B46EC
rpsE; 30S ribosomal protein S5
30S ribosomal protein S5 {ECO:0000255|HAMAP-Rule:MF_01307}; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus denitrificans (strain ATCC 25259).;"
SCN18_26_2_15_R1_F_scaffold_497_21
SCNPILOT_EXPT_300_BF_Thiobacillus_62_448, SCNPILOT_EXPT_300_BF_Thiobacillus_62_448, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


8883..9068
DNA (186bp) protein (62aa)
50S ribosomal protein L30 n=1 Tax=Thiobacillus thioparus RepID=UPI00036E5014
rpmD; 50S ribosomal protein L30
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
SCN18_26_2_15_R1_F_scaffold_497_22
SCNPILOT_EXPT_300_BF_Thiobacillus_62_448, SCNPILOT_EXPT_300_BF_Thiobacillus_62_448, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


9069..9503
DNA (435bp) protein (145aa)
50S ribosomal protein L15 n=1 Tax=Thiobacillus thioparus RepID=UPI00037CAF86
50S ribosomal protein L15
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
SCN18_26_2_15_R1_F_scaffold_497_23
SCNPILOT_EXPT_300_BF_Thiobacillus_62_448, SCNPILOT_EXPT_300_BF_Thiobacillus_62_448, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


9522..10835
DNA (1314bp) protein (438aa)
preprotein translocase subunit SecY n=1 Tax=Thiobacillus thioparus RepID=UPI00037717CB
secY; preprotein translocase subunit SecY
Protein translocase subunit SecY {ECO:0000256|HAMAP-Rule:MF_01465, ECO:0000256|RuleBase:RU000537}; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus denitrificans (strain ATCC 25259).;"
SCN18_26_2_15_R1_F_scaffold_497_24
SCNPILOT_EXPT_300_BF_Thiobacillus_62_448, SCNPILOT_EXPT_300_BF_Thiobacillus_62_448, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10835..11053
DNA (219bp) protein (73aa)
Translation initiation factor IF-1 1 n=2 Tax=Thiobacillus RepID=IF11_THIDA
infA; translation initiation factor IF-1
Translation initiation factor IF-1 1 {ECO:0000255|HAMAP-Rule:MF_00075}; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus denitrificans (strain ATCC 25259).;"
SCN18_26_2_15_R1_F_scaffold_497_25
SCNPILOT_EXPT_300_BF_Thiobacillus_62_448, SCNPILOT_EXPT_300_BF_Thiobacillus_62_448, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11097..11210
DNA (114bp) protein (38aa)
50S ribosomal protein L36 n=2 Tax=Thiomonas RepID=D5X638_THIK1
50S ribosomal protein L36
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
SCN18_26_2_15_R1_F_scaffold_497_26
SCNPILOT_EXPT_300_BF_Thiobacillus_62_448, SCNPILOT_EXPT_300_BF_Thiobacillus_62_448, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


11291..11647
DNA (357bp) protein (119aa)
30S ribosomal protein S13 n=1 Tax=Thiobacillus thioparus RepID=UPI00036CCA68
rpsM; 30S ribosomal protein S13
30S ribosomal protein S13 {ECO:0000255|HAMAP-Rule:MF_01315}; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus denitrificans (strain ATCC 25259).;"
SCN18_26_2_15_R1_F_scaffold_497_27
SCNPILOT_EXPT_300_BF_Thiobacillus_62_448, SCNPILOT_EXPT_300_BF_Thiobacillus_62_448, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


11657..12049
DNA (393bp) protein (131aa)
30S ribosomal protein S11 n=1 Tax=Thiobacillus denitrificans (strain ATCC 25259) RepID=RS11_THIDA
30S ribosomal protein S11
30S ribosomal protein S11 {ECO:0000255|HAMAP-Rule:MF_01310}; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus denitrificans (strain ATCC 25259).;"
SCN18_26_2_15_R1_F_scaffold_497_28
SCNPILOT_EXPT_300_BF_Thiobacillus_62_448, SCNPILOT_EXPT_300_BF_Thiobacillus_62_448, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


12065..12694
DNA (630bp) protein (210aa)
rpsD; 30S ribosomal protein S4; K02986 small subunit ribosomal protein S4 id=12495299 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
rpsD; 30S ribosomal protein S4
Tax=GWE1_Thiobacillus_62_9_curated
SCN18_26_2_15_R1_F_scaffold_497_29
SCNPILOT_EXPT_300_BF_Thiobacillus_62_448, SCNPILOT_EXPT_300_BF_Thiobacillus_62_448, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12724..13704
DNA (981bp) protein (327aa)
DNA-directed RNA polymerase subunit alpha (EC:2.7.7.6); K03040 DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6] id=12498468 bin=THIO_MID species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria
DNA-directed RNA polymerase subunit alpha (EC:2.7.7.6)
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
SCN18_26_2_15_R1_F_scaffold_497_30
SCNPILOT_EXPT_300_BF_Thiobacillus_62_448, SCNPILOT_EXPT_300_BF_Thiobacillus_62_448, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


13789..14178
DNA (390bp) protein (130aa)
50S ribosomal protein L17 n=1 Tax=Thiobacillus thioparus RepID=UPI00036728B3
50S ribosomal protein L17
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
Displaying items 1-30 of 57 in total

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