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SCN18_26_2_15_R2_B_scaffold_2095

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Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_26_2_15_R2_B_scaffold_2095_1
SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(29..208)
DNA (180bp) protein (60aa)
SCN18_26_2_15_R2_B_scaffold_2095_2
SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(244..1695)
DNA (1452bp) protein (484aa)
Nitrogen assimilation regulatory protein, NtrC n=1 Tax=Granulibacter bethesdensis (strain ATCC BAA-1260 / CGDNIH1) RepID=Q0BSS8_GRABC
Two component transcriptional regulator sigma54 specific Fis/NtrC/NtrX {ECO:0000313|EMBL:GAN75919.1}; TaxID=1231350 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidisphaera.;" source="Acidisphaera rubrifaciens HS-AP3.;"
Two-component response regulator NtrC
SCN18_26_2_15_R2_B_scaffold_2095_3
SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1692..2822)
DNA (1131bp) protein (377aa)
Nitrogen specific two-component sensor histidine kinase NtrB (EC:2.7.13.3)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=391165 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Granulibacter.;" source="Granulibacter bethesdensis (strain ATCC BAA-1260 / CGDNIH1).;"
Nitrogen regulation protein ntrB n=1 Tax=Granulibacter bethesdensis (strain ATCC BAA-1260 / CGDNIH1) RepID=Q0BSS7_GRABC
SCN18_26_2_15_R2_B_scaffold_2095_4
SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2819..3949)
DNA (1131bp) protein (377aa)
tRNA-dihydrouridine synthase {ECO:0000256|PIRNR:PIRNR006621}; EC=1.-.-.- {ECO:0000256|PIRNR:PIRNR006621};; TaxID=1231350 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidisphaera.;" source="Acidisphaera rubrifaciens HS-AP3.;"
tRNA-dihydrouridine synthase n=8 Tax=Acetobacter pasteurianus subsp. pasteurianus RepID=C7JC53_ACEP3
nifR3; tRNA-dihydrouridine synthase NifR3
SCN18_26_2_15_R2_B_scaffold_2095_5
SCNPILOT_CONT_500_P_Xanthomonadales_69_150, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(4389..5237)
DNA (849bp) protein (283aa)
short-chain dehydrogenase n=1 Tax=Rhodopseudomonas sp. B29 RepID=UPI000346AA06
Short chain dehydrogenase {ECO:0000313|EMBL:EZP52336.1}; TaxID=1470591 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. RIT328.;"
short chain dehydrogenase
SCN18_26_2_15_R2_B_scaffold_2095_6
SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5286..5915
DNA (630bp) protein (210aa)
Short chain dehydrogenase {ECO:0000313|EMBL:EZP52335.1}; EC=1.1.1.- {ECO:0000313|EMBL:EZP52335.1};; TaxID=1470591 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. RIT328.;"
short chain dehydrogenase (EC:1.1.1.-)
short-chain dehydrogenase n=1 Tax=Rhodopseudomonas sp. B29 RepID=UPI00034AEA63
SCN18_26_2_15_R2_B_scaffold_2095_7
SCNPILOT_EXPT_300_BF_Novosphingobium_63_58, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(6022..6783)
DNA (762bp) protein (254aa)
Short-chain dehydrogenase/reductase SDR n=1 Tax=Gluconacetobacter diazotrophicus (strain ATCC 49037 / DSM 5601 / PAl5) RepID=B5ZHR6_GLUDA
short-chain dehydrogenase/reductase SDR
Short-chain dehydrogenase/reductase SDR {ECO:0000313|EMBL:ACI52544.1}; TaxID=272568 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Gluconacetobacter.;" source="Gluconacetobacter diazotrophicus (strain ATCC 49037 / DSM 5601 /; PAl5).;"
SCN18_26_2_15_R2_B_scaffold_2095_8
SCNPILOT_EXPT_300_BF_Novosphingobium_63_58, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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6883..7833
DNA (951bp) protein (317aa)
Transcriptional regulator, AraC family n=1 Tax=Gluconacetobacter diazotrophicus (strain ATCC 49037 / DSM 5601 / PAl5) RepID=B5ZHR7_GLUDA
AraC family transcriptional regulator
Transcriptional regulator, AraC family {ECO:0000313|EMBL:ACI52545.1}; TaxID=272568 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Gluconacetobacter.;" source="Gluconacetobacter diazotrophicus (strain ATCC 49037 / DSM 5601 /; PAl5).;"
SCN18_26_2_15_R2_B_scaffold_2095_9
SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8085..8804)
DNA (720bp) protein (240aa)
ABC transporter ATP-binding protein n=1 Tax=Bradyrhizobium japonicum USDA 6 RepID=G7DJY6_BRAJP
High affinity branched-chain amino acid ABC transporter, ATP-binding protein {ECO:0000313|EMBL:AHY51299.1}; TaxID=476282 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium japonicum SEMIA 5079.;"
ABC transporter ATP-binding protein
SCN18_26_2_15_R2_B_scaffold_2095_10
SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(8804..11110)
DNA (2307bp) protein (769aa)
Biotin sulfoxide reductase (EC:1.-.-.-)
hypothetical protein n=1 Tax=Elioraea tepidiphila RepID=UPI000360A12B
Molybdopterin guanine dinucleotide-containing S/N-oxide reductase {ECO:0000313|EMBL:EHL97393.1}; TaxID=1054213 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; unclassified Acetobacteraceae.;" source="Acetobacteraceae bacterium AT-5844.;"
SCN18_26_2_15_R2_B_scaffold_2095_11
SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11260..11484
DNA (225bp) protein (75aa)
membrane protein n=1 Tax=Burkholderia kururiensis RepID=UPI00034A6E08
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AJZ62861.1}; TaxID=134537 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia fungorum.;"
SCN18_26_2_15_R2_B_scaffold_2095_12
SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11481..12941
DNA (1461bp) protein (487aa)
Na+/proline symporter n=1 Tax=Burkholderia sp. Ch1-1 RepID=I2ITY2_9BURK
Na+/solute symporter
Na+/proline symporter {ECO:0000313|EMBL:EIF34184.1}; TaxID=243261 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia sp. Ch1-1.;"
SCN18_26_2_15_R2_B_scaffold_2095_13
SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12907..13332)
DNA (426bp) protein (142aa)
hydrogenase n=1 Tax=Elioraea tepidiphila RepID=UPI00037F0624
HycG protein {ECO:0000313|EMBL:CDH45819.1}; TaxID=1400861 species="Bacteria; Proteobacteria; Gammaproteobacteria; Competibacteraceae; Candidatus Contendobacter.;" source="Candidatus Contendobacter odensis Run_B_J11.;"
hycG; hydrogenase-3 subunit G
Displaying 13 items

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