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SCN18_26_2_15_R2_B_scaffold_17

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Displaying items 1-30 of 439 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_26_2_15_R2_B_scaffold_17_1
SCNPILOT_CONT_1000_BF_Rhizobiales_65_18, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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3..125
DNA (123bp) protein (41aa)
Uncharacterized protein {ECO:0000313|EMBL:KKB10594.1}; TaxID=443610 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia geojensis.;"
SCN18_26_2_15_R2_B_scaffold_17_2
SCNPILOT_CONT_1000_BF_Rhizobiales_65_18, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

153..1709
DNA (1557bp) protein (519aa)
hypothetical protein n=1 Tax=Nodosilinea nodulosa RepID=UPI0002E7C358
Uncharacterized protein {ECO:0000313|EMBL:EKU99629.1}; TaxID=102129 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Oscillatoriales; Leptolyngbya.;" source="Leptolyngbya sp. PCC 7375.;"
glycosyltransferase
SCN18_26_2_15_R2_B_scaffold_17_3
SCNPILOT_CONT_1000_BF_Rhizobiales_65_18, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1702..3144
DNA (1443bp) protein (481aa)
hypothetical protein n=1 Tax=Ahrensia kielensis RepID=UPI00037EABB7
Uncharacterized protein {ECO:0000313|EMBL:KIL97376.1}; TaxID=272627 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Magnetospirillum.;" source="Magnetospirillum magnetotacticum MS-1.;"
glycosyltransferase
SCN18_26_2_15_R2_B_scaffold_17_4
SCNPILOT_CONT_1000_BF_Rhizobiales_65_18, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3216..4427
DNA (1212bp) protein (404aa)
Sel1 repeat protein n=1 Tax=Kingella denitrificans ATCC 33394 RepID=F0F1U5_9NEIS
Uncharacterized protein {ECO:0000313|EMBL:CDP51957.1}; TaxID=1228055 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. DDB001.;"
hypothetical protein
SCN18_26_2_15_R2_B_scaffold_17_5
SCNPILOT_CONT_1000_BF_Rhizobiales_65_18, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4435..5127)
DNA (693bp) protein (231aa)
Uncharacterized protein n=1 Tax=Nitratireductor pacificus pht-3B RepID=K2N194_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:KKB13229.1}; TaxID=443610 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia geojensis.;"
hypothetical protein
SCN18_26_2_15_R2_B_scaffold_17_trna_1
unknown

Not on your lists

5321..5394
DNA (74bp)
transferRNA Met
SCN18_26_2_15_R2_B_scaffold_17_6
SCNPILOT_CONT_1000_BF_Rhizobiales_65_18, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(5653..6183)
DNA (531bp) protein (177aa)
Putative Transcriptional regulator, TetR family n=1 Tax=Mesorhizobium metallidurans STM 2683 RepID=M5EUJ3_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:KDP75642.1}; TaxID=106592 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Ensifer.;" source="Ensifer adhaerens (Sinorhizobium morelense).;"
Transcriptional regulator
SCN18_26_2_15_R2_B_scaffold_17_7
SCNPILOT_CONT_1000_BF_Rhizobiales_65_18, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6323..6793
DNA (471bp) protein (157aa)
Uncharacterized protein n=1 Tax=Methylophaga frappieri (strain ATCC BAA-2434 / DSM 25690 / JAM7) RepID=I1YHX8_METFJ
Uncharacterized protein {ECO:0000313|EMBL:KDP75641.1}; TaxID=106592 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Ensifer.;" source="Ensifer adhaerens (Sinorhizobium morelense).;"
hypothetical protein
SCN18_26_2_15_R2_B_scaffold_17_8
SCNPILOT_CONT_1000_BF_Rhizobiales_65_18, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6790..7998
DNA (1209bp) protein (403aa)
hypothetical protein n=1 Tax=Actinoplanes globisporus RepID=UPI00036981CA
MFS transporter {ECO:0000313|EMBL:ETK35777.1}; TaxID=316330 species="Bacteria; Actinobacteria; Streptosporangiales; Streptosporangiaceae; Microbispora.;" source="Microbispora sp. ATCC PTA-5024.;"
major facilitator superfamily protein
SCN18_26_2_15_R2_B_scaffold_17_9
SCNPILOT_CONT_1000_BF_Rhizobiales_65_18, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8121..8213)
DNA (93bp) protein (31aa)
SCN18_26_2_15_R2_B_scaffold_17_10
SCNPILOT_CONT_1000_BF_Rhizobiales_65_18, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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8571..10364
DNA (1794bp) protein (598aa)
hypothetical protein n=1 Tax=Aureimonas ureilytica RepID=UPI000380AEDB
heparinase
Heparinase {ECO:0000313|EMBL:AJY48000.1}; TaxID=1486262 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Aurantimonadaceae; Martelella.;" source="Martelella endophytica.;"
SCN18_26_2_15_R2_B_scaffold_17_11
SCNPILOT_CONT_1000_BF_Rhizobiales_65_18, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10415..11689)
DNA (1275bp) protein (425aa)
Putative sugar ABC transporter, substrate-binding protein n=1 Tax=Rhizobium etli (strain CIAT 652) RepID=B3Q340_RHIE6
ABC transporter substrate-binding protein
ABC transporter substrate-binding protein {ECO:0000313|EMBL:AJY48001.1}; TaxID=1486262 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Aurantimonadaceae; Martelella.;" source="Martelella endophytica.;"
SCN18_26_2_15_R2_B_scaffold_17_12
SCNPILOT_CONT_1000_BF_Rhizobiales_65_18, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11708..12445)
DNA (738bp) protein (246aa)
Putative integral membrane protein n=1 Tax=Rhizobium sp. CF080 RepID=J3CX62_9RHIZ
Hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CDN58220.1}; TaxID=399 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Neorhizobium.;" source="Rhizobium galegae.;"
SCN18_26_2_15_R2_B_scaffold_17_13
SCNPILOT_CONT_1000_BF_Rhizobiales_65_18, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12442..13269)
DNA (828bp) protein (276aa)
ATPase component of ABC-type sugar transporter n=1 Tax=Rhizobium leguminosarum bv. trifolii WSM2012 RepID=J0K5I6_RHILT
ATPase component of ABC-type sugar transporter {ECO:0000313|EMBL:EJC72474.1}; TaxID=754522 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium leguminosarum bv. trifolii WSM2012.;"
sugar ABC transporter ATP-binding protein
SCN18_26_2_15_R2_B_scaffold_17_14
SCNPILOT_CONT_1000_BF_Rhizobiales_65_18, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13274..14131)
DNA (858bp) protein (286aa)
ABC-type sugar transport system, permease component n=1 Tax=Rhizobium leguminosarum bv. trifolii WSM2297 RepID=J0CM34_RHILT
sugar ABC transporter permease protein
Sugar ABC transporter permease protein {ECO:0000313|EMBL:AIC30882.1}; TaxID=1432050 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium etli bv. mimosae str. IE4771.;"
SCN18_26_2_15_R2_B_scaffold_17_15
SCNPILOT_CONT_1000_BF_Rhizobiales_65_18, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14128..15063)
DNA (936bp) protein (312aa)
Probable sugar ABC transporter, permease protein n=1 Tax=Rhizobium etli (strain CIAT 652) RepID=B3Q335_RHIE6
putative sugar ABC transporter permease
Probable sugar ABC transporter, permease protein {ECO:0000313|EMBL:ACE94592.1}; TaxID=491916 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium etli (strain CIAT 652).;"
SCN18_26_2_15_R2_B_scaffold_17_16
SCNPILOT_CONT_1000_BF_Rhizobiales_65_18, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15192..16187
DNA (996bp) protein (332aa)
hypothetical protein n=1 Tax=Martelella mediterranea RepID=UPI00036D5043
Uncharacterized protein {ECO:0000313|EMBL:KKB13128.1}; TaxID=443610 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia geojensis.;"
periplasmic binding protein/LacI transcriptional regulator
SCN18_26_2_15_R2_B_scaffold_17_17
SCNPILOT_CONT_1000_BF_Rhizobiales_65_18, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16244..18172
DNA (1929bp) protein (643aa)
hypothetical protein n=1 Tax=Martelella mediterranea RepID=UPI00037A8604
Uncharacterized protein {ECO:0000313|EMBL:KKC31414.1}; TaxID=728005 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia psychrophila.;"
hypothetical protein
SCN18_26_2_15_R2_B_scaffold_17_18
SCNPILOT_CONT_1000_BF_Rhizobiales_65_18, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18172..19179
DNA (1008bp) protein (336aa)
hypothetical protein n=1 Tax=Chelatococcus sp. GW1 RepID=UPI0002D42850
2-hydroxyacid dehydrogenase {ECO:0000313|EMBL:KKB13134.1}; TaxID=443610 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia geojensis.;"
D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding subunit
SCN18_26_2_15_R2_B_scaffold_17_19
SCNPILOT_CONT_1000_BF_Rhizobiales_65_18, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19187..19840
DNA (654bp) protein (218aa)
hypothetical protein n=1 Tax=Rhizobium sp. 2MFCol3.1 RepID=UPI00036CC6E6
Uncharacterized protein {ECO:0000313|EMBL:KGM35299.1}; TaxID=1398085 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Inquilinus.;" source="Inquilinus limosus MP06.;"
hypothetical protein
SCN18_26_2_15_R2_B_scaffold_17_20
SCNPILOT_CONT_1000_BF_Rhizobiales_65_18, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19981..21198
DNA (1218bp) protein (406aa)
ROK n=1 Tax=Jannaschia sp. (strain CCS1) RepID=Q28SM3_JANSC
Uncharacterized protein {ECO:0000313|EMBL:KKB86034.1}; TaxID=1121477 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia limi DSM 17137.;"
hypothetical protein
SCN18_26_2_15_R2_B_scaffold_17_21
SCNPILOT_CONT_1000_BF_Rhizobiales_65_18, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21268..22182
DNA (915bp) protein (305aa)
UPI0003CFDE87 related cluster n=1 Tax=unknown RepID=UPI0003CFDE87
gluconolactonase
Gluconolactonase {ECO:0000313|EMBL:ESZ06265.1}; TaxID=1287182 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. L48C026A00.;"
SCN18_26_2_15_R2_B_scaffold_17_22
SCNPILOT_CONT_1000_BF_Rhizobiales_65_18, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22203..22970)
DNA (768bp) protein (256aa)
3-oxoacyl-[acyl-carrier protein] reductase {ECO:0000313|EMBL:CDP53402.1}; EC=1.1.1.100 {ECO:0000313|EMBL:CDP53402.1};; TaxID=1228055 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. DDB001.;"
hypothetical protein n=1 Tax=Kaistia granuli RepID=UPI00036ABBE1
short-chain dehydrogenase/reductase SDR
SCN18_26_2_15_R2_B_scaffold_17_23
SCNPILOT_CONT_1000_BF_Rhizobiales_65_18, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22967..23974)
DNA (1008bp) protein (336aa)
hypothetical protein n=1 Tax=Chelatococcus sp. GW1 RepID=UPI0002DCED33
NAD-binding protein {ECO:0000313|EMBL:KKB08871.1}; TaxID=429727 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia chinhatensis.;"
oxidoreductase family, NAD-binding Rossmann fold protein
SCN18_26_2_15_R2_B_scaffold_17_24
SCNPILOT_CONT_1000_BF_Rhizobiales_65_18, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24131..25435
DNA (1305bp) protein (435aa)
Nicotinate phosphoribosyltransferase {ECO:0000256|HAMAP-Rule:MF_00570, ECO:0000256|RuleBase:RU003838}; Short=NAPRTase {ECO:0000256|HAMAP-Rule:MF_00570};; EC=6.3.4.21 {ECO:0000256|HAMAP-Rule:MF_00570, ECO:0000256|RuleBase:RU003838};; TaxID=1121477 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia limi DSM 17137.;"
Nicotinate phosphoribosyltransferase n=3 Tax=Ochrobactrum RepID=C4WGS9_9RHIZ
nicotinate phosphoribosyltransferase
SCN18_26_2_15_R2_B_scaffold_17_25
SCNPILOT_CONT_1000_BF_Rhizobiales_65_18, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25432..26241
DNA (810bp) protein (270aa)
Hydroxypyruvate isomerase {ECO:0000256|PIRNR:PIRNR006241}; EC=5.3.1.22 {ECO:0000256|PIRNR:PIRNR006241};; TaxID=395492 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium leguminosarum bv. trifolii (strain WSM2304).;"
hypothetical protein n=1 Tax=Kaistia granuli RepID=UPI0003766116
xylose isomerase
SCN18_26_2_15_R2_B_scaffold_17_26
SCNPILOT_CONT_1000_BF_Rhizobiales_65_18, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26362..28113
DNA (1752bp) protein (584aa)
Diguanylate cyclase n=1 Tax=Rhodopseudomonas palustris (strain TIE-1) RepID=B3QJE3_RHOPT
Diguanylate cyclase {ECO:0000313|EMBL:KKB83882.1}; TaxID=1121477 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia limi DSM 17137.;"
diguanylate cyclase
SCN18_26_2_15_R2_B_scaffold_17_27
SCNPILOT_CONT_1000_BF_Rhizobiales_65_18, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28196..29236
DNA (1041bp) protein (347aa)
Uncharacterized protein n=1 Tax=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) RepID=A7HZ58_PARL1
Uncharacterized protein {ECO:0000313|EMBL:CDP50981.1}; TaxID=1228055 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. DDB001.;"
hypothetical protein
SCN18_26_2_15_R2_B_scaffold_17_28
SCNPILOT_CONT_1000_BF_Rhizobiales_65_18, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(29230..29526)
DNA (297bp) protein (99aa)
Acetyltransferase n=1 Tax=Mesorhizobium sp. LNJC380A00 RepID=V7GMH8_9RHIZ
Acetyltransferase {ECO:0000313|EMBL:KKC41073.1}; TaxID=1293439 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia epidermidihirudinis.;"
acetyltransferase
SCN18_26_2_15_R2_B_scaffold_17_29
SCNPILOT_CONT_1000_BF_Rhizobiales_65_18, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(29536..30099)
DNA (564bp) protein (188aa)
Uncharacterized protein n=1 Tax=Puniceispirillum marinum (strain IMCC1322) RepID=D5BTT1_PUNMI
TPR domain protein {ECO:0000313|EMBL:CDP50983.1}; TaxID=1228055 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. DDB001.;"
hypothetical protein
Displaying items 1-30 of 439 in total

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