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SCN18_26_2_15_R2_B_scaffold_1405

Search features with annotation key words

Displaying 20 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_26_2_15_R2_B_scaffold_1405_1
SCNPILOT_CONT_300_BF_Rhizobiales_62_47, SCNPILOT_CONT_300_BF_Rhizobiales_62_47, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(402..842)
DNA (441bp) protein (147aa)
Uncharacterized protein n=1 Tax=Hyphomicrobium sp. (strain MC1) RepID=F8J868_HYPSM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCB66068.1}; TaxID=717785 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium sp. (strain MC1).;"
SCN18_26_2_15_R2_B_scaffold_1405_2
SCNPILOT_CONT_300_BF_Rhizobiales_62_47, SCNPILOT_CONT_300_BF_Rhizobiales_62_47, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1040..1696
DNA (657bp) protein (219aa)
pdxH; pyridoxine 5'-phosphate oxidase (EC:1.4.3.5)
Pyridoxine/pyridoxamine 5'-phosphate oxidase {ECO:0000256|HAMAP-Rule:MF_01629}; EC=1.4.3.5 {ECO:0000256|HAMAP-Rule:MF_01629, ECO:0000313|EMBL:CCB66066.1};; PNP/PMP oxidase {ECO:0000256|HAMAP-Rule:MF_01629}; Pyridoxal 5'-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_01629}; TaxID=717785 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium sp. (strain MC1).;"
Pyridoxine/pyridoxamine 5'-phosphate oxidase n=1 Tax=Hyphomicrobium sp. (strain MC1) RepID=F8J866_HYPSM
SCN18_26_2_15_R2_B_scaffold_1405_3
SCNPILOT_CONT_300_BF_Rhizobiales_62_47, SCNPILOT_CONT_300_BF_Rhizobiales_62_47, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1764..2816
DNA (1053bp) protein (351aa)
Uncharacterized protein n=1 Tax=Hyphomicrobium sp. (strain MC1) RepID=F8J865_HYPSM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCB66065.1}; TaxID=717785 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium sp. (strain MC1).;"
SCN18_26_2_15_R2_B_scaffold_1405_4
SCNPILOT_CONT_300_BF_Rhizobiales_62_47, SCNPILOT_CONT_300_BF_Rhizobiales_62_47, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2656..3564)
DNA (909bp) protein (303aa)
Uncharacterized protein n=1 Tax=Hyphomicrobium sp. (strain MC1) RepID=F8J864_HYPSM
domain beta-lactamase-like
Uncharacterized protein {ECO:0000313|EMBL:CCB66064.1}; TaxID=717785 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium sp. (strain MC1).;"
SCN18_26_2_15_R2_B_scaffold_1405_5
SCNPILOT_CONT_300_BF_Rhizobiales_62_47, SCNPILOT_CONT_300_BF_Rhizobiales_62_47, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3645..4919)
DNA (1275bp) protein (425aa)
Monooxygenase, FAD binding n=1 Tax=Hyphomicrobium sp. (strain MC1) RepID=F8J863_HYPSM
FAD-binding monooxygenase
Monooxygenase, FAD binding {ECO:0000313|EMBL:CCB66063.1}; TaxID=717785 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium sp. (strain MC1).;"
SCN18_26_2_15_R2_B_scaffold_1405_6
SCNPILOT_CONT_300_BF_Rhizobiales_62_47, SCNPILOT_CONT_300_BF_Rhizobiales_62_47, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4916..5818)
DNA (903bp) protein (301aa)
Transcriptional regulator protein n=1 Tax=Agrobacterium radiobacter (strain K84 / ATCC BAA-868) RepID=B9JBG2_AGRRK
Putative AraC family transcriptional regulator {ECO:0000313|EMBL:GAJ91418.1}; TaxID=1220581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium.;" source="Rhizobium rhizogenes NBRC 13257.;"
transcriptional regulator
SCN18_26_2_15_R2_B_scaffold_1405_7
SCNPILOT_CONT_300_BF_Rhizobiales_62_47, SCNPILOT_CONT_300_BF_Rhizobiales_62_47, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5962..6777
DNA (816bp) protein (272aa)
3-oxoacyl-ACP reductase n=1 Tax=Rhizobium leguminosarum RepID=UPI000373099F
short-chain dehydrogenase/reductase SDR
Uncharacterized protein {ECO:0000313|EMBL:EJC70141.1}; TaxID=755176 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium leguminosarum bv. viciae WSM1455.;"
SCN18_26_2_15_R2_B_scaffold_1405_8
SCNPILOT_CONT_300_BF_Rhizobiales_62_47, SCNPILOT_CONT_300_BF_Rhizobiales_62_47, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7012..8019)
DNA (1008bp) protein (336aa)
Uncharacterized 37.6 kDa protein in cld 5'region n=1 Tax=Hyphomicrobium sp. (strain MC1) RepID=F8J862_HYPSM
hypothetical protein
Uncharacterized 37.6 kDa protein in cld 5'region {ECO:0000313|EMBL:CCB66062.1}; TaxID=717785 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium sp. (strain MC1).;"
SCN18_26_2_15_R2_B_scaffold_1405_9
SCNPILOT_CONT_300_BF_Rhizobiales_62_47, SCNPILOT_CONT_300_BF_Rhizobiales_62_47, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8115..9917
DNA (1803bp) protein (601aa)
Uncharacterized protein n=1 Tax=Hyphomicrobium nitrativorans NL23 RepID=V5S8W2_9RHIZ
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHB47201.1}; TaxID=1029756 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium nitrativorans NL23.;"
SCN18_26_2_15_R2_B_scaffold_1405_10
SCNPILOT_CONT_300_BF_Rhizobiales_62_47, SCNPILOT_CONT_300_BF_Rhizobiales_62_47, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9914..10234
DNA (321bp) protein (107aa)
SCN18_26_2_15_R2_B_scaffold_1405_trna_2
unknown

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comp(10439..10512)
DNA (74bp)
transferRNA Pro
SCN18_26_2_15_R2_B_scaffold_1405_trna_1
unknown

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10803..10874
DNA (72bp)
transferRNA Gln
SCN18_26_2_15_R2_B_scaffold_1405_11
SCNPILOT_CONT_300_BF_Rhizobiales_62_47, SCNPILOT_CONT_300_BF_Rhizobiales_62_47, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11342..12565
DNA (1224bp) protein (408aa)
hypothetical protein n=1 Tax=Kaistia granuli RepID=UPI00035EF881
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACB75323.1}; TaxID=452637 species="Bacteria; Verrucomicrobia; Opitutae; Opitutales; Opitutaceae; Opitutus.;" source="Opitutus terrae (strain DSM 11246 / PB90-1).;"
SCN18_26_2_15_R2_B_scaffold_1405_12
SCNPILOT_CONT_300_BF_Rhizobiales_62_47, SCNPILOT_CONT_300_BF_Rhizobiales_62_47, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12649..13521)
DNA (873bp) protein (291aa)
Uncharacterized protein n=1 Tax=Roseobacter sp. AzwK-3b RepID=A6FJW9_9RHOB
Uncharacterized protein {ECO:0000313|EMBL:EDM72687.1}; TaxID=351016 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Roseobacter.;" source="Roseobacter sp. AzwK-3b.;"
SCN18_26_2_15_R2_B_scaffold_1405_13
SCNPILOT_CONT_300_BF_Rhizobiales_62_47, SCNPILOT_CONT_300_BF_Rhizobiales_62_47, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13998..14288
DNA (291bp) protein (97aa)
hypothetical protein n=1 Tax=Hyphomicrobium zavarzinii RepID=UPI0003606C9D
DNA methyltransferase
DNA methyltransferase {ECO:0000313|EMBL:AHB47958.1}; TaxID=1029756 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium nitrativorans NL23.;"
SCN18_26_2_15_R2_B_scaffold_1405_14
SCNPILOT_CONT_300_BF_Rhizobiales_62_47, SCNPILOT_CONT_300_BF_Rhizobiales_62_47, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14384..15046)
DNA (663bp) protein (221aa)
AAA ATPase n=1 Tax=Hyphomicrobium denitrificans (strain ATCC 51888 / DSM 1869 / NCIB 11706 / TK 0415) RepID=D8JVH7_HYPDA
ATPase AAA
AAA ATPase {ECO:0000313|EMBL:ADJ24831.1}; TaxID=582899 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium denitrificans (strain ATCC 51888 / DSM 1869 / NCIB; 11706 / TK 0415).;"
SCN18_26_2_15_R2_B_scaffold_1405_15
SCNPILOT_CONT_300_BF_Rhizobiales_62_47, SCNPILOT_CONT_300_BF_Rhizobiales_62_47, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15227..15418)
DNA (192bp) protein (64aa)
SCN18_26_2_15_R2_B_scaffold_1405_16
SCNPILOT_CONT_300_BF_Rhizobiales_62_47, SCNPILOT_CONT_300_BF_Rhizobiales_62_47, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15656..16774
DNA (1119bp) protein (373aa)
FAD dependent oxidoreductase (Modular protein) n=1 Tax=Hyphomicrobium sp. (strain MC1) RepID=F8J857_HYPSM
FAD dependent oxidoreductase
FAD dependent oxidoreductase (Modular protein) {ECO:0000313|EMBL:CCB66057.1}; TaxID=717785 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium sp. (strain MC1).;"
SCN18_26_2_15_R2_B_scaffold_1405_17
SCNPILOT_CONT_300_BF_Rhizobiales_62_47, SCNPILOT_CONT_300_BF_Rhizobiales_62_47, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16733..16891)
DNA (159bp) protein (53aa)
SCN18_26_2_15_R2_B_scaffold_1405_18
SCNPILOT_CONT_300_BF_Rhizobiales_62_47, SCNPILOT_CONT_300_BF_Rhizobiales_62_47, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17233..19098
DNA (1866bp) protein (622aa)
hypothetical protein n=1 Tax=SAR324 cluster bacterium SCGC AAA240-J09 RepID=UPI00030D2128
Uncharacterized protein {ECO:0000313|EMBL:ETX01460.1}; TaxID=1429438 species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY1.;"
FkbH-like protein
Displaying 20 items

View Taxonomy