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SCN18_26_2_15_R2_B_scaffold_1711

Search features with annotation key words

Displaying 10 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_26_2_15_R2_B_scaffold_1711_1
SCNPILOT_CONT_300_BF_Rhizobiales_62_47, SCNPILOT_CONT_300_BF_Rhizobiales_62_47, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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1..1023
DNA (1023bp) protein (341aa)
pheS; phenylalanine tRNA synthetase subunit alpha (EC:6.1.1.20)
Phenylalanine--tRNA ligase alpha subunit {ECO:0000256|HAMAP-Rule:MF_00281, ECO:0000256|SAAS:SAAS00016813}; EC=6.1.1.20 {ECO:0000256|HAMAP-Rule:MF_00281, ECO:0000256|SAAS:SAAS00089474};; Phenylalanyl-tRNA synthetase alpha subunit {ECO:0000256|HAMAP-Rule:MF_00281}; TaxID=717785 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium sp. (strain MC1).;"
Phenylalanine--tRNA ligase alpha subunit n=1 Tax=Hyphomicrobium sp. (strain MC1) RepID=F8J8M0_HYPSM
SCN18_26_2_15_R2_B_scaffold_1711_2
SCNPILOT_CONT_300_BF_Rhizobiales_62_47, SCNPILOT_CONT_300_BF_Rhizobiales_62_47, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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1035..3467
DNA (2433bp) protein (811aa)
Phenylalanine--tRNA ligase beta subunit {ECO:0000256|HAMAP-Rule:MF_00283, ECO:0000256|SAAS:SAAS00103829}; EC=6.1.1.20 {ECO:0000256|HAMAP-Rule:MF_00283, ECO:0000256|SAAS:SAAS00022425};; Phenylalanyl-tRNA synthetase beta subunit {ECO:0000256|HAMAP-Rule:MF_00283}; TaxID=717785 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium sp. (strain MC1).;"
pheT; phenylalanine tRNA synthetase subunit beta (EC:6.1.1.20)
Phenylalanine--tRNA ligase beta subunit n=1 Tax=Hyphomicrobium sp. (strain MC1) RepID=F8J8L9_HYPSM
SCN18_26_2_15_R2_B_scaffold_1711_3
SCNPILOT_CONT_300_BF_Rhizobiales_62_47, SCNPILOT_CONT_300_BF_Rhizobiales_62_47, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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3501..4859
DNA (1359bp) protein (453aa)
ndh; respiratory NADH dehydrogenase 2; cupric reductase (EC:1.16.1.- 1.6.99.3)
Respiratory NADH dehydrogenase 2 cupric reductase {ECO:0000313|EMBL:CCB63592.1}; EC=1.16.1.- {ECO:0000313|EMBL:CCB63592.1};; EC=1.6.99.3 {ECO:0000313|EMBL:CCB63592.1};; TaxID=717785 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium sp. (strain MC1).;"
Respiratory NADH dehydrogenase 2 cupric reductase n=1 Tax=Hyphomicrobium sp. (strain MC1) RepID=F8J8L8_HYPSM
SCN18_26_2_15_R2_B_scaffold_1711_4
SCNPILOT_CONT_300_BF_Rhizobiales_62_47, SCNPILOT_CONT_300_BF_Rhizobiales_62_47, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(4943..6184)
DNA (1242bp) protein (414aa)
Lytic murein transglycosylase n=1 Tax=Hyphomicrobium sp. (strain MC1) RepID=F8J8L7_HYPSM
Lytic murein transglycosylase
Lytic murein transglycosylase {ECO:0000313|EMBL:CCB63591.1}; TaxID=717785 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium sp. (strain MC1).;"
SCN18_26_2_15_R2_B_scaffold_1711_5
SCNPILOT_CONT_300_BF_Rhizobiales_62_47, SCNPILOT_CONT_300_BF_Rhizobiales_62_47, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(6284..7240)
DNA (957bp) protein (319aa)
Uncharacterized protein n=1 Tax=Hyphomicrobium denitrificans 1NES1 RepID=N0B7R8_9RHIZ
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADJ22195.1}; TaxID=582899 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium denitrificans (strain ATCC 51888 / DSM 1869 / NCIB; 11706 / TK 0415).;"
SCN18_26_2_15_R2_B_scaffold_1711_6
SCNPILOT_CONT_300_BF_Rhizobiales_62_47, SCNPILOT_CONT_300_BF_Rhizobiales_62_47, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(7378..8970)
DNA (1593bp) protein (531aa)
hypothetical protein n=1 Tax=Hyphomicrobium zavarzinii RepID=UPI00035F301F
SulP family inorganic anion transporter
SulP family inorganic anion transporter {ECO:0000313|EMBL:AHB47409.1}; TaxID=1029756 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium nitrativorans NL23.;"
SCN18_26_2_15_R2_B_scaffold_1711_7
SCNPILOT_CONT_300_BF_Rhizobiales_62_47, SCNPILOT_CONT_300_BF_Rhizobiales_62_47, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(9210..9773)
DNA (564bp) protein (188aa)
Putative uncharacterized protein n=1 Tax=Hyphomicrobium denitrificans (strain ATCC 51888 / DSM 1869 / NCIB 11706 / TK 0415) RepID=D8JRG5_HYPDA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADJ22194.1}; TaxID=582899 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium denitrificans (strain ATCC 51888 / DSM 1869 / NCIB; 11706 / TK 0415).;"
SCN18_26_2_15_R2_B_scaffold_1711_8
SCNPILOT_CONT_300_BF_Rhizobiales_62_47, SCNPILOT_CONT_300_BF_Rhizobiales_62_47, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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9945..11747
DNA (1803bp) protein (601aa)
Elongation factor 4 {ECO:0000256|HAMAP-Rule:MF_00071}; Short=EF-4 {ECO:0000256|HAMAP-Rule:MF_00071};; EC=3.6.5.n1 {ECO:0000256|HAMAP-Rule:MF_00071};; Ribosomal back-translocase LepA {ECO:0000256|HAMAP-Rule:MF_00071}; TaxID=717785 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium sp. (strain MC1).;"
Elongation factor 4 n=1 Tax=Hyphomicrobium sp. (strain MC1) RepID=F8J8L4_HYPSM
lepA; GTP-binding elongation factor
SCN18_26_2_15_R2_B_scaffold_1711_9
SCNPILOT_CONT_300_BF_Rhizobiales_62_47, SCNPILOT_CONT_300_BF_Rhizobiales_62_47, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(11785..15834)
DNA (4050bp) protein (1350aa)
AsmA family protein n=1 Tax=Hyphomicrobium sp. (strain MC1) RepID=F8J8L3_HYPSM
AsmA family protein
AsmA family protein {ECO:0000313|EMBL:CCB63587.1}; TaxID=717785 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium sp. (strain MC1).;"
SCN18_26_2_15_R2_B_scaffold_1711_10
SCNPILOT_CONT_300_BF_Rhizobiales_62_47, SCNPILOT_CONT_300_BF_Rhizobiales_62_47, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16238..18541
DNA (2304bp) protein (768aa)
DNA helicase {ECO:0000256|SAAS:SAAS00145970}; EC=3.6.4.12 {ECO:0000256|SAAS:SAAS00145970};; TaxID=717785 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium sp. (strain MC1).;"
uvrD; DNA-dependent ATPase I and helicase II (EC:3.6.1.-)
DNA-dependent ATPase I and helicase II n=1 Tax=Hyphomicrobium sp. (strain MC1) RepID=F8J8L2_HYPSM
Displaying 10 items

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