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SCN18_26_2_15_R2_B_scaffold_5003

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Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_26_2_15_R2_B_scaffold_5003_1
SCNPILOT_CONT_300_BF_Rhizobiales_62_47, SCNPILOT_CONT_300_BF_Rhizobiales_62_47, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3..614
DNA (612bp) protein (204aa)
cobH; precorrin-8X methylmutase (EC:5.4.1.2)
Precorrin-8X methylmutase (Precorrin isomerase) (HBA synthase) {ECO:0000313|EMBL:CCB63923.1}; EC=5.4.1.2 {ECO:0000313|EMBL:CCB63923.1};; TaxID=717785 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium sp. (strain MC1).;"
Precorrin-8X methylmutase (Precorrin isomerase) (HBA synthase) n=1 Tax=Hyphomicrobium sp. (strain MC1) RepID=F8JCD8_HYPSM
SCN18_26_2_15_R2_B_scaffold_5003_2
SCNPILOT_CONT_300_BF_Rhizobiales_62_47, SCNPILOT_CONT_300_BF_Rhizobiales_62_47, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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611..1354
DNA (744bp) protein (248aa)
cobI; precorrin-2 C(20)-methyltransferase (EC:2.1.1.130)
Precorrin-2 C(20)-methyltransferase (S-adenosyl-L-methionine--precorrin-2 methyltransferase) (SP2MT) {ECO:0000313|EMBL:CCB63924.1}; EC=2.1.1.130 {ECO:0000313|EMBL:CCB63924.1};; TaxID=717785 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium sp. (strain MC1).;"
Precorrin-2 C(20)-methyltransferase (S-adenosyl-L-methionine--precorrin-2 methyltransferase) (SP2MT) n=1 Tax=Hyphomicrobium sp. (strain MC1) RepID=F8JIQ0_HYPSM
SCN18_26_2_15_R2_B_scaffold_5003_3
SCNPILOT_CONT_300_BF_Rhizobiales_62_47, SCNPILOT_CONT_300_BF_Rhizobiales_62_47, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1351..2106
DNA (756bp) protein (252aa)
cobJ; precorrin-3B C(17)-methyltransferase (EC:2.1.1.131)
Precorrin-3B C(17)-methyltransferase (Precorrin-3 methyltransferase) (Precorrin-3 methylase) {ECO:0000313|EMBL:CCB63925.1}; EC=2.1.1.131 {ECO:0000313|EMBL:CCB63925.1};; TaxID=717785 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium sp. (strain MC1).;"
Precorrin-3B C(17)-methyltransferase (Precorrin-3 methyltransferase) (Precorrin-3 methylase) n=1 Tax=Hyphomicrobium sp. (strain MC1) RepID=F8JCD9_HYPSM
SCN18_26_2_15_R2_B_scaffold_5003_4
SCNPILOT_CONT_300_BF_Rhizobiales_62_47, SCNPILOT_CONT_300_BF_Rhizobiales_62_47, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2079..2864)
DNA (786bp) protein (262aa)
cobK; precorrin-6A reductase (EC:1.3.1.54)
Precorrin-6A reductase {ECO:0000313|EMBL:CCB63926.1}; EC=1.3.1.54 {ECO:0000313|EMBL:CCB63926.1};; TaxID=717785 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium sp. (strain MC1).;"
Precorrin-6A reductase n=1 Tax=Hyphomicrobium sp. (strain MC1) RepID=F8JCE0_HYPSM
SCN18_26_2_15_R2_B_scaffold_5003_5
SCNPILOT_CONT_300_BF_Rhizobiales_62_47, SCNPILOT_CONT_300_BF_Rhizobiales_62_47, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2882..4105
DNA (1224bp) protein (408aa)
precorrin-6y C5,15-methyltransferase subunit CbiE (EC:2.1.1.132)
Precorrin-6y C5,15-methyltransferase (Decarboxylating), CbiE subunit {ECO:0000313|EMBL:ADJ24489.1}; EC=2.1.1.132 {ECO:0000313|EMBL:ADJ24489.1};; TaxID=582899 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium denitrificans (strain ATCC 51888 / DSM 1869 / NCIB; 11706 / TK 0415).;"
Precorrin-6y C5,15-methyltransferase (Decarboxylating), CbiE subunit n=1 Tax=Hyphomicrobium denitrificans (strain ATCC 51888 / DSM 1869 / NCIB 11706 / TK 0415) RepID=D8JTU1_HYPDA
SCN18_26_2_15_R2_B_scaffold_5003_6
SCNPILOT_CONT_300_BF_Rhizobiales_62_47, SCNPILOT_CONT_300_BF_Rhizobiales_62_47, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4102..4488
DNA (387bp) protein (129aa)
Precorrin methylase n=1 Tax=Hyphomicrobium denitrificans 1NES1 RepID=N0BF81_9RHIZ
precorrin methylase
Precorrin methylase {ECO:0000313|EMBL:AGK59091.1}; TaxID=670307 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium denitrificans 1NES1.;"
SCN18_26_2_15_R2_B_scaffold_5003_7
SCNPILOT_CONT_300_BF_Rhizobiales_62_47, SCNPILOT_CONT_300_BF_Rhizobiales_62_47, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4485..5240
DNA (756bp) protein (252aa)
cobM; precorrin-4 C(11)-methyltransferase (EC:2.1.1.133)
Precorrin-4 C(11)-methyltransferase (Precorrin-3 methylase) {ECO:0000313|EMBL:CCB63929.1}; EC=2.1.1.133 {ECO:0000313|EMBL:CCB63929.1};; TaxID=717785 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium sp. (strain MC1).;"
Precorrin-4 C(11)-methyltransferase (Precorrin-3 methylase) n=1 Tax=Hyphomicrobium sp. (strain MC1) RepID=F8JCE3_HYPSM
SCN18_26_2_15_R2_B_scaffold_5003_8
SCNPILOT_CONT_300_BF_Rhizobiales_62_47, SCNPILOT_CONT_300_BF_Rhizobiales_62_47, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5259..6527
DNA (1269bp) protein (423aa)
Hydrogenobyrinate a,c-diamide synthase {ECO:0000256|HAMAP-Rule:MF_00027}; EC=6.3.5.9 {ECO:0000256|HAMAP-Rule:MF_00027};; Hydrogenobyrinic acid a,c-diamide synthase {ECO:0000256|HAMAP-Rule:MF_00027}; TaxID=717785 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium sp. (strain MC1).;"
Cobyrinic acid A,C-diamide synthase n=1 Tax=Hyphomicrobium sp. (strain MC1) RepID=F8JIQ1_HYPSM
cobB; cobyrinic acid a,c-diamide synthase
SCN18_26_2_15_R2_B_scaffold_5003_9
SCNPILOT_CONT_300_BF_Rhizobiales_62_47, SCNPILOT_CONT_300_BF_Rhizobiales_62_47, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6756..6923
DNA (168bp) protein (56aa)
Uncharacterized protein n=1 Tax=Hyphomicrobium sp. (strain MC1) RepID=F8JCE4_HYPSM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCB63931.1}; TaxID=717785 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium sp. (strain MC1).;"
SCN18_26_2_15_R2_B_scaffold_5003_10
SCNPILOT_CONT_300_BF_Rhizobiales_62_47, SCNPILOT_CONT_300_BF_Rhizobiales_62_47, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6910..7464
DNA (555bp) protein (185aa)
RNA polymerase sigma factor n=1 Tax=Hyphomicrobium sp. (strain MC1) RepID=F8JCE5_HYPSM
RNA polymerase sigma factor
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000716, ECO:0000313|EMBL:CCB63932.1}; TaxID=717785 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium sp. (strain MC1).;"
SCN18_26_2_15_R2_B_scaffold_5003_11
SCNPILOT_CONT_300_BF_Rhizobiales_62_47, SCNPILOT_CONT_300_BF_Rhizobiales_62_47, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7591..8397
DNA (807bp) protein (269aa)
Regulatory protein PhyR n=1 Tax=Hyphomicrobium sp. (strain MC1) RepID=F8JIQ2_HYPSM
phyR; regulatory protein PhyR
Regulatory protein PhyR {ECO:0000313|EMBL:CCB63933.1}; TaxID=717785 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium sp. (strain MC1).;"
SCN18_26_2_15_R2_B_scaffold_5003_12
SCNPILOT_CONT_300_BF_Rhizobiales_62_47, SCNPILOT_CONT_300_BF_Rhizobiales_62_47, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8469..8939)
DNA (471bp) protein (157aa)
PRC-barrel domain protein n=1 Tax=Hyphomicrobium sp. (strain MC1) RepID=F8JCE6_HYPSM
PRC-barrel domain-containing protein (fragment)
PRC-barrel domain protein {ECO:0000313|EMBL:CCB63934.1}; TaxID=717785 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium sp. (strain MC1).;"
SCN18_26_2_15_R2_B_scaffold_5003_13
SCNPILOT_CONT_300_BF_Rhizobiales_62_47, SCNPILOT_CONT_300_BF_Rhizobiales_62_47, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9133..9309)
DNA (177bp) protein (59aa)
UPF0391 membrane protein HYPMC_0702 n=1 Tax=Hyphomicrobium sp. (strain MC1) RepID=F8JCE7_HYPSM
hypothetical protein
UPF0391 membrane protein HYPMC_0702 {ECO:0000256|HAMAP-Rule:MF_01361}; TaxID=717785 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium sp. (strain MC1).;"
Displaying 13 items

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