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SCN18_26_2_15_R2_B_scaffold_4176

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Displaying 7 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_26_2_15_R2_B_scaffold_4176_1
SCNPILOT_CONT_300_BF_Rhizobiales_62_47, SCNPILOT_CONT_300_BF_Rhizobiales_62_47, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2..430)
DNA (429bp) protein (143aa)
Transcriptional regulator, AraC family n=1 Tax=Hyphomicrobium sp. (strain MC1) RepID=F8JBM3_HYPSM
AraC family transcriptional regulator
Transcriptional regulator, AraC family {ECO:0000313|EMBL:CCB65094.1}; TaxID=717785 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium sp. (strain MC1).;"
SCN18_26_2_15_R2_B_scaffold_4176_2
SCNPILOT_CONT_300_BF_Rhizobiales_62_47, SCNPILOT_CONT_300_BF_Rhizobiales_62_47, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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802..2262
DNA (1461bp) protein (487aa)
betB; betaine aldehyde dehydrogenase (EC:1.2.1.8)
Betaine aldehyde dehydrogenase {ECO:0000313|EMBL:CCB65095.1}; EC=1.2.1.8 {ECO:0000313|EMBL:CCB65095.1};; TaxID=717785 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium sp. (strain MC1).;"
Betaine aldehyde dehydrogenase n=1 Tax=Hyphomicrobium sp. (strain MC1) RepID=F8JBM4_HYPSM
SCN18_26_2_15_R2_B_scaffold_4176_3
SCNPILOT_CONT_300_BF_Rhizobiales_62_47, SCNPILOT_CONT_300_BF_Rhizobiales_62_47, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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2308..3969
DNA (1662bp) protein (554aa)
betA; choline dehydrogenase (EC:1.1.99.1)
Choline dehydrogenase {ECO:0000256|RuleBase:RU003969, ECO:0000313|EMBL:CCB65096.1}; EC=1.1.99.1 {ECO:0000256|RuleBase:RU003969, ECO:0000313|EMBL:CCB65096.1};; TaxID=717785 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium sp. (strain MC1).;"
Choline dehydrogenase n=1 Tax=Hyphomicrobium sp. (strain MC1) RepID=F8JBM5_HYPSM
SCN18_26_2_15_R2_B_scaffold_4176_4
SCNPILOT_CONT_300_BF_Rhizobiales_62_47, SCNPILOT_CONT_300_BF_Rhizobiales_62_47, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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4075..4269
DNA (195bp) protein (65aa)
Putative uncharacterized protein n=1 Tax=Hyphomicrobium denitrificans (strain ATCC 51888 / DSM 1869 / NCIB 11706 / TK 0415) RepID=D8JV65_HYPDA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADJ22881.1}; TaxID=582899 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium denitrificans (strain ATCC 51888 / DSM 1869 / NCIB; 11706 / TK 0415).;"
SCN18_26_2_15_R2_B_scaffold_4176_5
SCNPILOT_CONT_300_BF_Rhizobiales_62_47, SCNPILOT_CONT_300_BF_Rhizobiales_62_47, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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4404..5309
DNA (906bp) protein (302aa)
Probable DNA repair protein HYPMC_2435 n=1 Tax=Hyphomicrobium sp. (strain MC1) RepID=F8J8F3_HYPSM
DNA repair protein Hden_1068
Non-homologous end joining protein Ku {ECO:0000256|HAMAP-Rule:MF_01875}; TaxID=717785 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium sp. (strain MC1).;"
SCN18_26_2_15_R2_B_scaffold_4176_6
SCNPILOT_CONT_300_BF_Rhizobiales_62_47, SCNPILOT_CONT_300_BF_Rhizobiales_62_47, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(5556..6509)
DNA (954bp) protein (318aa)
DNA polymerase LigD, ligase domain protein n=1 Tax=Hyphomicrobium sp. (strain MC1) RepID=F8JHK1_HYPSM
DNA polymerase LigD, ligase domain-containing protein
DNA polymerase LigD, ligase domain protein {ECO:0000313|EMBL:CCB65651.1}; TaxID=717785 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium sp. (strain MC1).;"
SCN18_26_2_15_R2_B_scaffold_4176_7
SCNPILOT_CONT_300_BF_Rhizobiales_62_47, SCNPILOT_CONT_300_BF_Rhizobiales_62_47, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6604..7500)
DNA (897bp) protein (299aa)
DNA polymerase LigD, polymerase domain protein n=1 Tax=Hyphomicrobium sp. (strain MC1) RepID=F8JHK0_HYPSM
DNA polymerase LigD, polymerase domain-containing protein
DNA polymerase LigD, polymerase domain protein {ECO:0000313|EMBL:CCB65650.1}; TaxID=717785 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium sp. (strain MC1).;"
Displaying 7 items

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