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SCN18_26_2_15_R2_B_scaffold_7032

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Displaying 8 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_26_2_15_R2_B_scaffold_7032_1
SCNPILOT_EXPT_300_BF_Sphingomonas_67_13, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1..1128)
DNA (1128bp) protein (376aa)
Putative ATP-independent RNA helicase, DEAD/DEAH-box family protein n=1 Tax=Hyphomicrobium sp. (strain MC1) RepID=F8JHY6_HYPSM
ATP-independent RNA helicase, DEAD/DEAH-box family protein
Putative ATP-independent RNA helicase, DEAD/DEAH-box family protein {ECO:0000313|EMBL:CCB63455.1}; TaxID=717785 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium sp. (strain MC1).;"
SCN18_26_2_15_R2_B_scaffold_7032_2
Hyphomicrobium nitrativorans, Hyphomicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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1528..1731
DNA (204bp) protein (68aa)
Uncharacterized protein n=1 Tax=Hyphomicrobium nitrativorans NL23 RepID=V5SIY1_9RHIZ
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHB49894.1}; TaxID=1029756 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium nitrativorans NL23.;"
SCN18_26_2_15_R2_B_scaffold_7032_3
SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1724..2677)
DNA (954bp) protein (318aa)
UPI0003D0051B related cluster n=1 Tax=unknown RepID=UPI0003D0051B
Uncharacterized protein {ECO:0000313|EMBL:ESZ78368.1}; TaxID=1287074 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. L103C105A0.;"
hypothetical protein
SCN18_26_2_15_R2_B_scaffold_7032_4
SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2661..3026)
DNA (366bp) protein (122aa)
Helix-turn-helix domain protein n=1 Tax=Holophaga foetida DSM 6591 RepID=H1NZQ8_9BACT
XRE family transcriptional regulator
Transcriptional regulator, XRE family {ECO:0000313|EMBL:ACK50896.1}; TaxID=395965 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Beijerinckiaceae; Methylocella.;" source="Methylocella silvestris (strain BL2 / DSM 15510 / NCIMB 13906).;"
SCN18_26_2_15_R2_B_scaffold_7032_5
SCNPILOT_CONT_1000_BF_Mesorhizobium_65_39, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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3215..3898
DNA (684bp) protein (228aa)
hypothetical protein n=1 Tax=Bradyrhizobium japonicum RepID=UPI000367BA52
Uncharacterized protein {ECO:0000313|EMBL:CDX12282.1}; TaxID=69974 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium plurifarium.;"
Hypothetical protein
SCN18_26_2_15_R2_B_scaffold_7032_6
CN-SCN_Arenimonas_307x, Arenimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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3895..4227
DNA (333bp) protein (111aa)
hypothetical protein n=1 Tax=Bradyrhizobium japonicum RepID=UPI00037EBE8F
Putative uncharacterized protein {ECO:0000313|EMBL:EHR69322.1}; TaxID=864051 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales.;" source="Burkholderiales bacterium JOSHI_001.;"
SCN18_26_2_15_R2_B_scaffold_7032_7
SCNPILOT_CONT_1000_BF_Mesorhizobium_65_39, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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4224..4727
DNA (504bp) protein (168aa)
hypothetical protein n=1 Tax=Dyella ginsengisoli RepID=UPI00037CAEC4
Uncharacterized protein {ECO:0000313|EMBL:KGB53564.1}; TaxID=1120705 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. LC363.;"
SCN18_26_2_15_R2_B_scaffold_7032_8
SCNPILOT_CONT_1000_BF_Mesorhizobium_65_39, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4724..4885
DNA (162bp) protein (54aa)
UBA/THIF-type NAD/FAD binding protein n=1 Tax=Methylosinus trichosporium OB3b RepID=D5QWP0_METTR
UBA/THIF-type NAD/FAD binding protein {ECO:0000313|EMBL:KFG90844.1}; TaxID=1219045 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium herbicidovorans (strain ATCC 700291 / DSM 11019 / NBRC; 16415 / MH) (Sphingomonas herbicidovorans).;"
UBA/THIF-type NAD/FAD binding protein
Displaying 8 items

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