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SCN18_26_2_15_R2_B_scaffold_3816

Search features with annotation key words

Displaying 8 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_26_2_15_R2_B_scaffold_3816_1
SCNPILOT_CONT_300_BF_Rhizobiales_62_47, SCNPILOT_CONT_300_BF_Rhizobiales_62_47, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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3..1019
DNA (1017bp) protein (339aa)
rffG; dTDP-glucose 4,6-dehydratase (EC:4.2.1.46)
dTDP-glucose 4,6-dehydratase {ECO:0000256|RuleBase:RU004473, ECO:0000313|EMBL:CCB65039.1}; EC=4.2.1.46 {ECO:0000256|RuleBase:RU004473, ECO:0000313|EMBL:CCB65039.1};; TaxID=717785 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium sp. (strain MC1).;"
dTDP-glucose 4,6-dehydratase n=1 Tax=Hyphomicrobium sp. (strain MC1) RepID=F8JAR2_HYPSM
SCN18_26_2_15_R2_B_scaffold_3816_2
SCNPILOT_CONT_300_BF_Rhizobiales_62_47, SCNPILOT_CONT_300_BF_Rhizobiales_62_47, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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1016..1966
DNA (951bp) protein (317aa)
rfbD; dTDP-4-dehydrorhamnose reductase (EC:1.1.1.133)
dTDP-4-dehydrorhamnose reductase {ECO:0000313|EMBL:CCB65038.1}; EC=1.1.1.133 {ECO:0000313|EMBL:CCB65038.1};; TaxID=717785 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium sp. (strain MC1).;"
dTDP-4-dehydrorhamnose reductase n=1 Tax=Hyphomicrobium sp. (strain MC1) RepID=F8JAR1_HYPSM
SCN18_26_2_15_R2_B_scaffold_3816_3
SCNPILOT_CONT_300_BF_Rhizobiales_62_47, SCNPILOT_CONT_300_BF_Rhizobiales_62_47, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1963..2841
DNA (879bp) protein (293aa)
rfbA; glucose-1-phosphate thymidylyltransferase (EC:2.7.7.24)
Glucose-1-phosphate thymidylyltransferase {ECO:0000256|RuleBase:RU003706, ECO:0000313|EMBL:CCB65037.1}; EC=2.7.7.24 {ECO:0000256|RuleBase:RU003706, ECO:0000313|EMBL:CCB65037.1};; TaxID=717785 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium sp. (strain MC1).;"
Glucose-1-phosphate thymidylyltransferase n=1 Tax=Hyphomicrobium sp. (strain MC1) RepID=F8JAR0_HYPSM
SCN18_26_2_15_R2_B_scaffold_3816_4
SCNPILOT_CONT_300_BF_Rhizobiales_62_47, SCNPILOT_CONT_300_BF_Rhizobiales_62_47, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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2804..3817
DNA (1014bp) protein (338aa)
UPF0176 protein HYPMC_0676 n=1 Tax=Hyphomicrobium sp. (strain MC1) RepID=F8JCC5_HYPSM
hypothetical protein
UPF0176 protein HYPMC_0676 {ECO:0000256|HAMAP-Rule:MF_00469}; TaxID=717785 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium sp. (strain MC1).;"
SCN18_26_2_15_R2_B_scaffold_3816_5
SCNPILOT_CONT_300_BF_Rhizobiales_62_47, SCNPILOT_CONT_300_BF_Rhizobiales_62_47, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3978..5474
DNA (1497bp) protein (499aa)
Uroporphyrin-III C-methyltransferase n=1 Tax=Hyphomicrobium sp. (strain MC1) RepID=F8JCD0_HYPSM
uroporphyrin-III C-methyltransferase
Uroporphyrin-III C-methyltransferase {ECO:0000313|EMBL:CCB63915.1}; TaxID=717785 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium sp. (strain MC1).;"
SCN18_26_2_15_R2_B_scaffold_3816_6
SCNPILOT_CONT_300_BF_Rhizobiales_62_47, SCNPILOT_CONT_300_BF_Rhizobiales_62_47, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5523..6497
DNA (975bp) protein (325aa)
Cobalamin biosynthesis protein CobD n=1 Tax=Hyphomicrobium sp. (strain MC1) RepID=F8JCD1_HYPSM
cobD; cobalamin biosynthesis protein cobD
Cobalamin biosynthesis protein CobD {ECO:0000256|HAMAP-Rule:MF_00024}; TaxID=717785 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium sp. (strain MC1).;"
SCN18_26_2_15_R2_B_scaffold_3816_7
SCNPILOT_CONT_300_BF_Rhizobiales_62_47, SCNPILOT_CONT_300_BF_Rhizobiales_62_47, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6481..7953)
DNA (1473bp) protein (491aa)
Cobyric acid synthase n=1 Tax=Hyphomicrobium sp. (strain MC1) RepID=F8JCD2_HYPSM
cobQ; cobyric acid synthase
Cobyric acid synthase {ECO:0000256|HAMAP-Rule:MF_00028, ECO:0000256|SAAS:SAAS00231811}; TaxID=717785 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium sp. (strain MC1).;"
SCN18_26_2_15_R2_B_scaffold_3816_8
SCNPILOT_CONT_300_BF_Rhizobiales_62_47, SCNPILOT_CONT_300_BF_Rhizobiales_62_47, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7953..8117)
DNA (165bp) protein (55aa)
cobO; cob(I)yrinic acid a,c-diamide adenosyltransferase (EC:2.5.1.17)
Cob(I)yrinic acid a,c-diamide adenosyltransferase (Cob(I)alamin adenosyltransferase) (Corrinoid adenosyltransferase) {ECO:0000313|EMBL:CCB63918.1}; EC=2.5.1.17 {ECO:0000313|EMBL:CCB63918.1};; TaxID=717785 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium sp. (strain MC1).;"
Cob(I)yrinic acid a,c-diamide adenosyltransferase (Cob(I)alamin adenosyltransferase) (Corrinoid adenosyltransferase) n=1 Tax=Hyphomicrobium sp. (strain MC1) RepID=F8JCD3_HYPSM
Displaying 8 items

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