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SCN18_26_2_15_R3_B_scaffold_408

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Displaying items 1-30 of 56 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_26_2_15_R3_B_scaffold_408_1
SCNPILOT_EXPT_750_BF_Xanthomonadales_66_150, SCNPILOT_EXPT_750_BF_Xanthomonadales_66_150, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3..2357)
DNA (2355bp) protein (785aa)
Conserved uncharacterized protein n=1 Tax=Stigmatella aurantiaca (strain DW4/3-1) RepID=Q08VY3_STIAD
hypothetical protein
Tax=RBG_13_OP8X_37_8_curated
SCN18_26_2_15_R3_B_scaffold_408_2
SCNPILOT_EXPT_750_BF_Xanthomonadales_66_150, SCNPILOT_EXPT_750_BF_Xanthomonadales_66_150, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3004..3213)
DNA (210bp) protein (70aa)
SCN18_26_2_15_R3_B_scaffold_408_3
SCNPILOT_EXPT_750_BF_Xanthomonadales_66_150, SCNPILOT_EXPT_750_BF_Xanthomonadales_66_150, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3424..5169
DNA (1746bp) protein (582aa)
Uncharacterized protein {ECO:0000313|EMBL:KFN49885.1}; TaxID=1121013 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Arenimonas.;" source="Arenimonas composti TR7-09 = DSM 18010.;"
Putative uncharacterized protein id=2588163 bin=GWF1_Xanthomonadales_69_6 species=Acidovorax citrulli genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Xanthomonadales_69_6 organism_group=Gammaproteobacteria
endoproteinase ArgC
SCN18_26_2_15_R3_B_scaffold_408_4
SCNPILOT_EXPT_750_BF_Xanthomonadales_66_150, SCNPILOT_EXPT_750_BF_Xanthomonadales_66_150, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5330..6457)
DNA (1128bp) protein (376aa)
membrane protein n=1 Tax=Stenotrophomonas maltophilia RepID=UPI0002D58DB5
Membrane protein {ECO:0000313|EMBL:AHY59771.1}; TaxID=216778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas rhizophila.;"
multidrug ABC transporter permease
SCN18_26_2_15_R3_B_scaffold_408_5
SCNPILOT_EXPT_750_BF_Xanthomonadales_66_150, SCNPILOT_EXPT_750_BF_Xanthomonadales_66_150, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6454..7623)
DNA (1170bp) protein (390aa)
ABC transporter permease n=1 Tax=Stenotrophomonas maltophilia RepID=UPI00036B323E
ABC transporter permease {ECO:0000313|EMBL:AHY59770.1}; TaxID=216778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas rhizophila.;"
ABC-2 type transporter
SCN18_26_2_15_R3_B_scaffold_408_6
SCNPILOT_EXPT_750_BF_Xanthomonadales_66_150, SCNPILOT_EXPT_750_BF_Xanthomonadales_66_150, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7620..8654)
DNA (1035bp) protein (345aa)
HlyD family secretion protein n=1 Tax=Cellvibrio japonicus (strain Ueda107) RepID=B3PDY5_CELJU
NODE_25, whole genome shotgun sequence {ECO:0000313|EMBL:KIQ98121.1}; TaxID=1199154 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter sp. A03.;"
HlyD family secretion protein
SCN18_26_2_15_R3_B_scaffold_408_7
SCNPILOT_EXPT_750_BF_Xanthomonadales_66_150, SCNPILOT_EXPT_750_BF_Xanthomonadales_66_150, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8651..10054)
DNA (1404bp) protein (468aa)
Outer membrane efflux protein n=1 Tax=Stenotrophomonas maltophilia (strain R551-3) RepID=B4SPJ2_STRM5
outer membrane efflux protein
Outer membrane efflux protein {ECO:0000313|EMBL:ACF50879.1}; Flags: Precursor;; TaxID=391008 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia group.;" source="Stenotrophomonas maltophilia (strain R551-3).;"
SCN18_26_2_15_R3_B_scaffold_408_8
SCNPILOT_EXPT_750_BF_Xanthomonadales_66_150, SCNPILOT_EXPT_750_BF_Xanthomonadales_66_150, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10409..10948)
DNA (540bp) protein (180aa)
Putative lyase n=1 Tax=Rubrivivax gelatinosus (strain NBRC 100245 / IL144) RepID=I0HR38_RUBGI
putative lyase
Putative lyase {ECO:0000313|EMBL:BAL95475.1}; TaxID=983917 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax gelatinosus (strain NBRC 100245 / IL144).;"
SCN18_26_2_15_R3_B_scaffold_408_9
SCNPILOT_EXPT_750_BF_Xanthomonadales_66_150, SCNPILOT_EXPT_750_BF_Xanthomonadales_66_150, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10951..11346)
DNA (396bp) protein (132aa)
hypothetical protein n=1 Tax=Herbaspirillum sp. JC206 RepID=UPI00037124DF
hypothetical protein
Tax=GWC2_Chloroflexi_49_37_curated
SCN18_26_2_15_R3_B_scaffold_408_10
SCNPILOT_EXPT_750_BF_Xanthomonadales_66_150, SCNPILOT_EXPT_750_BF_Xanthomonadales_66_150, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11511..12338)
DNA (828bp) protein (276aa)
hypothetical protein n=1 Tax=Dyella japonica RepID=UPI0002F19211
NADPH-dependent 7-cyano-7-deazaguanine reductase
Tax=BJP_08E140C01_Xanthomonadales_64_42
SCN18_26_2_15_R3_B_scaffold_408_11
SCNPILOT_EXPT_750_BF_Xanthomonadales_66_150, SCNPILOT_EXPT_750_BF_Xanthomonadales_66_150, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12388..12789)
DNA (402bp) protein (134aa)
Acyl-CoA hydrolase n=1 Tax=Rhodanobacter sp. 115 RepID=I4VPG5_9GAMM
Thioesterase {ECO:0000313|EMBL:KGO99578.1}; TaxID=1385515 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter defluvii IMMIB APB-9 = DSM 18482.;"
acyl-CoA hydrolase
SCN18_26_2_15_R3_B_scaffold_408_12
SCNPILOT_EXPT_750_BF_Xanthomonadales_66_150, SCNPILOT_EXPT_750_BF_Xanthomonadales_66_150, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12800..13840)
DNA (1041bp) protein (347aa)
Ribonucleoside-diphosphate reductase subunit beta {ECO:0000256|PIRNR:PIRNR000355}; EC=1.17.4.1 {ECO:0000256|PIRNR:PIRNR000355};; TaxID=1121015 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Arenimonas.;" source="Arenimonas oryziterrae DSM 21050 = YC6267.;"
ribonucleoside-diphosphate reductase n=1 Tax=Arenimonas oryziterrae RepID=UPI0003B69066
ribonucleoside-diphosphate reductase
SCN18_26_2_15_R3_B_scaffold_408_13
SCNPILOT_EXPT_750_BF_Xanthomonadales_66_150, SCNPILOT_EXPT_750_BF_Xanthomonadales_66_150, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14089..16551)
DNA (2463bp) protein (821aa)
Ribonucleoside-diphosphate reductase {ECO:0000256|RuleBase:RU003410}; EC=1.17.4.1 {ECO:0000256|RuleBase:RU003410};; TaxID=1121015 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Arenimonas.;" source="Arenimonas oryziterrae DSM 21050 = YC6267.;"
ribonucleoside-diphosphate reductase n=1 Tax=Arenimonas oryziterrae RepID=UPI0003B4D611
ribonucleoside-diphosphate reductase
SCN18_26_2_15_R3_B_scaffold_408_14
SCNPILOT_EXPT_750_BF_Xanthomonadales_66_150, SCNPILOT_EXPT_750_BF_Xanthomonadales_66_150, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17171..17764)
DNA (594bp) protein (198aa)
SCN18_26_2_15_R3_B_scaffold_408_15
SCNPILOT_EXPT_750_BF_Xanthomonadales_66_150, SCNPILOT_EXPT_750_BF_Xanthomonadales_66_150, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18014..18583)
DNA (570bp) protein (190aa)
Uncharacterized protein {ECO:0000313|EMBL:KFL35958.1}; TaxID=1121014 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Arenimonas.;" source="Arenimonas donghaensis DSM 18148 = HO3-R19.;"
Probable general secretion pathway protein g id=2940852 bin=GWF1_Xanthomonadales_69_6 species=Xylella fastidiosa genus=Xylella taxon_order=Xanthomonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWF1_Xanthomonadales_69_6 organism_group=Gammaproteobacteria
SCN18_26_2_15_R3_B_scaffold_408_16
SCNPILOT_EXPT_750_BF_Xanthomonadales_66_150, SCNPILOT_EXPT_750_BF_Xanthomonadales_66_150, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19003..20343)
DNA (1341bp) protein (447aa)
Uncharacterized protein n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4XSS0_SORCE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGP33633.1}; TaxID=1254432 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum So0157-2.;"
SCN18_26_2_15_R3_B_scaffold_408_17
SCNPILOT_EXPT_750_BF_Xanthomonadales_66_150, SCNPILOT_EXPT_750_BF_Xanthomonadales_66_150, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20550..21341
DNA (792bp) protein (264aa)
Acyl-CoA thioesterase n=2 Tax=Rhodanobacter RepID=M4NBR7_9GAMM
acyl-CoA thioesterase
Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
SCN18_26_2_15_R3_B_scaffold_408_18
SCNPILOT_EXPT_750_BF_Xanthomonadales_66_150, SCNPILOT_EXPT_750_BF_Xanthomonadales_66_150, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21414..22706)
DNA (1293bp) protein (431aa)
Outer membrane efflux protein n=1 Tax=Pseudoxanthomonas spadix (strain BD-a59) RepID=G7UT27_PSEUP
outer membrane efflux protein
Outer membrane efflux protein {ECO:0000313|EMBL:AER56092.1}; TaxID=1045855 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Pseudoxanthomonas.;" source="Pseudoxanthomonas spadix (strain BD-a59).;"
SCN18_26_2_15_R3_B_scaffold_408_19
SCNPILOT_EXPT_750_BF_Xanthomonadales_66_150, SCNPILOT_EXPT_750_BF_Xanthomonadales_66_150, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22703..23035)
DNA (333bp) protein (111aa)
Uncharacterized protein n=2 Tax=Alicycliphilus denitrificans RepID=E8U1D8_ALIDB
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADV01191.1}; Flags: Precursor;; TaxID=596153 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus denitrificans (strain DSM 18852 / JCM 14587 / BC).;"
SCN18_26_2_15_R3_B_scaffold_408_20
SCNPILOT_EXPT_750_BF_Xanthomonadales_66_150, SCNPILOT_EXPT_750_BF_Xanthomonadales_66_150, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23032..26124)
DNA (3093bp) protein (1031aa)
Heavy metal efflux pump, CzcA family n=1 Tax=Comamonas testosteroni KF-1 RepID=B7WYS0_COMTE
Heavy metal efflux pump, CzcA family {ECO:0000313|EMBL:KCV66894.1}; TaxID=1331202 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Bordetella.;" source="Bordetella bronchiseptica 99-R-0433.;"
cytochrome C peroxidase
SCN18_26_2_15_R3_B_scaffold_408_21
SCNPILOT_EXPT_750_BF_Xanthomonadales_66_150, SCNPILOT_EXPT_750_BF_Xanthomonadales_66_150, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26136..27338)
DNA (1203bp) protein (401aa)
Efflux transporter, RND family, MFP subunit n=1 Tax=Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601) RepID=F4G9F8_ALIDK
RND family efflux transporter MFP subunit
Efflux transporter, RND family, MFP subunit {ECO:0000313|EMBL:AEB83373.1}; TaxID=596154 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601).;"
SCN18_26_2_15_R3_B_scaffold_408_22
SCNPILOT_EXPT_750_BF_Xanthomonadales_66_150, SCNPILOT_EXPT_750_BF_Xanthomonadales_66_150, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27629..29044)
DNA (1416bp) protein (472aa)
Histidine kinase A domain protein n=2 Tax=Alicycliphilus denitrificans RepID=E8U1D3_ALIDB
histidine kinase a domain-containing protein
Integral membrane sensor signal transduction histidine kinase {ECO:0000313|EMBL:AEB83376.1}; TaxID=596154 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601).;"
SCN18_26_2_15_R3_B_scaffold_408_23
SCNPILOT_EXPT_750_BF_Xanthomonadales_66_150, SCNPILOT_EXPT_750_BF_Xanthomonadales_66_150, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(29045..29710)
DNA (666bp) protein (222aa)
transcriptional regulator n=1 Tax=Comamonas sp. B-9 RepID=UPI00039585B7
two component transcriptional regulator
Two component transcriptional regulator, winged helix family {ECO:0000313|EMBL:ABX35352.1}; TaxID=398578 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans (strain DSM 14801 / SPH-1).;"
SCN18_26_2_15_R3_B_scaffold_408_24
SCNPILOT_EXPT_750_BF_Xanthomonadales_66_150, SCNPILOT_EXPT_750_BF_Xanthomonadales_66_150, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(29808..30800)
DNA (993bp) protein (331aa)
GumN protein n=1 Tax=Arenimonas oryziterrae RepID=UPI0003B77CA5
GumN protein {ECO:0000313|EMBL:EYR70345.1}; TaxID=1444315 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter capsici AZ78.;"
gumN; GumN protein
SCN18_26_2_15_R3_B_scaffold_408_25
SCNPILOT_EXPT_750_BF_Xanthomonadales_66_150, SCNPILOT_EXPT_750_BF_Xanthomonadales_66_150, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

30941..31375
DNA (435bp) protein (145aa)
GCN5 family acetyltransferase n=1 Tax=Nocardiopsis sp. CNS639 RepID=UPI00035EC560
GCN5-related N-acetyltransferase
GCN5-related N-acetyltransferase {ECO:0000313|EMBL:AHG92785.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
SCN18_26_2_15_R3_B_scaffold_408_26
SCNPILOT_EXPT_750_BF_Xanthomonadales_66_150, SCNPILOT_EXPT_750_BF_Xanthomonadales_66_150, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(31422..32600)
DNA (1179bp) protein (393aa)
Uncharacterized protein n=1 Tax=Flavobacterium limnosediminis JC2902 RepID=V6SQI9_9FLAO
Uncharacterized protein {ECO:0000313|EMBL:KGI78470.1}; TaxID=1543381 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Oleiagrimonas.;" source="Oleiagrimonas soli.;"
SCN18_26_2_15_R3_B_scaffold_408_27
SCNPILOT_EXPT_750_BF_Xanthomonadales_66_150, SCNPILOT_EXPT_750_BF_Xanthomonadales_66_150, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

32870..33427
DNA (558bp) protein (186aa)
N-acetyltransferase GCN5 n=1 Tax=Arenimonas oryziterrae RepID=UPI0003B69E5E
Uncharacterized protein {ECO:0000313|EMBL:KFN43583.1}; TaxID=1121015 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Arenimonas.;" source="Arenimonas oryziterrae DSM 21050 = YC6267.;"
putative N-acetyltransferase
SCN18_26_2_15_R3_B_scaffold_408_28
SCNPILOT_EXPT_750_BF_Xanthomonadales_66_150, SCNPILOT_EXPT_750_BF_Xanthomonadales_66_150, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

33602..34504
DNA (903bp) protein (301aa)
Multidrug DMT transporter permease n=1 Tax=Ralstonia sp. AU12-08 RepID=S9S030_9RALS
Multidrug DMT transporter permease {ECO:0000313|EMBL:EPX97502.1}; TaxID=1235457 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Ralstonia.;" source="Ralstonia sp. AU12-08.;"
multidrug DMT transporter permease
SCN18_26_2_15_R3_B_scaffold_408_29
SCNPILOT_EXPT_750_BF_Xanthomonadales_66_150, SCNPILOT_EXPT_750_BF_Xanthomonadales_66_150, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(34781..37525)
DNA (2745bp) protein (915aa)
Zinc protease n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W778_9GAMM
Peptidase M16 {ECO:0000313|EMBL:GAN45084.1}; TaxID=1475481 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Mizugakiibacter.;" source="Mizugakiibacter sediminis.;"
peptidase M16
SCN18_26_2_15_R3_B_scaffold_408_30
SCNPILOT_EXPT_750_BF_Xanthomonadales_66_150, SCNPILOT_EXPT_750_BF_Xanthomonadales_66_150, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

37699..38397
DNA (699bp) protein (233aa)
Short-chain dehydrogenase/reductase SDR n=3 Tax=mine drainage metagenome RepID=T1AKP7_9ZZZZ
Short-chain dehydrogenase {ECO:0000313|EMBL:KGM53188.1}; TaxID=1385517 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter daejeonensis GH1-9.;"
short-chain dehydrogenase/reductase SDR
Displaying items 1-30 of 56 in total

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