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SCN18_26_2_15_R5_B_scaffold_301

Search features with annotation key words

Displaying items 1-30 of 50 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_26_2_15_R5_B_scaffold_301_1
SCNpilot_BF_INOC_Bordetella_67_10, SCNpilot_BF_INOC_Bordetella_67_10, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2..838)
DNA (837bp) protein (279aa)
hypothetical protein n=1 Tax=alpha proteobacterium SCGC AAA015-N04 RepID=UPI0003824BAB
taurine catabolism dioxygenase TauD, TfdA family protein
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCN18_26_2_15_R5_B_scaffold_301_2
Acidovorax sp. KKS102_CN-SCN_Acidovorax_28x, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(849..1358)
DNA (510bp) protein (170aa)
hypothetical protein n=1 Tax=Duganella zoogloeoides RepID=UPI00036802B2
hypothetical protein
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCN18_26_2_15_R5_B_scaffold_301_3
CN-SCN_Erythrobacter_14x, CN-SCN_Erythrobacter_14x, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1434..2453
DNA (1020bp) protein (340aa)
Putative phosphodiesterase/alkaline phosphatase D n=1 Tax=Parvularcula bermudensis (strain ATCC BAA-594 / HTCC2503 / KCTC 12087) RepID=E0TFA6_PARBH
phosphodiesterase/alkaline phosphatase D
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCN18_26_2_15_R5_B_scaffold_301_4
SCN_Variovorax_21x, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2464..3429)
DNA (966bp) protein (322aa)
Uncharacterized protein n=1 Tax=Cupriavidus basilensis OR16 RepID=H1RYR4_9BURK
Tricarboxylate transport protein TctC
Cupriavidus basilensis strain 4G11 chromosome secondary, complete sequence {ECO:0000313|EMBL:AJG23729.1}; TaxID=68895 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Cupriavidus.;" source="Cupriavidus basilensis.;"
SCN18_26_2_15_R5_B_scaffold_301_5
SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3451..4338)
DNA (888bp) protein (296aa)
alpha-ketoglutarate-dependent 2,4-dichlorophenoxyacetate dioxygenase (EC:1.14.11.-)
Alpha-ketoglutarate-dependent 2,4-dichlorophenoxyacetate dioxygenase (2,4-D dioxygenase) n=1 Tax=Bradyrhizobium sp. ORS 375 RepID=H0SL61_9BRAD
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCN18_26_2_15_R5_B_scaffold_301_6
SCNPILOT_SOLID2_TRIM150_Rhizobiales_63_17, SCNPILOT_SOLID2_TRIM150_Rhizobiales_63_17, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4462..5391
DNA (930bp) protein (310aa)
Transcriptional regulator, GntR family n=1 Tax=Roseomonas cervicalis ATCC 49957 RepID=D5RGV8_9PROT
Putative HTH-type transcriptional regulator McbR {ECO:0000313|EMBL:KCB35925.1}; TaxID=1331258 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Bordetella.;" source="Bordetella hinzii 8-296-03.;"
GntR family transcriptional regulator
SCN18_26_2_15_R5_B_scaffold_301_7
CN-SCN_Lautropia_15x, CN-SCN_Lautropia_15x, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5422..6993)
DNA (1572bp) protein (524aa)
phoD; alkaline phosphatase (EC:3.1.3.1)
Alkaline phosphatase n=1 Tax=Gloeobacter kilaueensis JS1 RepID=U5QJF2_9CYAN
Twin-arginine translocation pathway signal {ECO:0000313|EMBL:KFC69038.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
SCN18_26_2_15_R5_B_scaffold_301_8
unknown

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7338..7607
DNA (270bp) protein (90aa)

This feature has no annotations

SCN18_26_2_15_R5_B_scaffold_301_9
CN-SCN_Acidovorax_22x, CN-SCN_Acidovorax_22x, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7693..8679)
DNA (987bp) protein (329aa)
Uncharacterized protein n=1 Tax=Microvirga sp. WSM3557 RepID=I4YP91_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:KFG67123.1}; TaxID=670292 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Microvirga.;" source="Microvirga aerilata.;"
Tricarboxylate transport protein TctC
SCN18_26_2_15_R5_B_scaffold_301_10
SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8722..9789)
DNA (1068bp) protein (356aa)
tartrate dehydrogenase (EC:1.1.1.93)
Tartrate dehydrogenase n=1 Tax=Oceanibaculum indicum P24 RepID=K2IJB2_9PROT
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCN18_26_2_15_R5_B_scaffold_301_11
SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10064..11749
DNA (1686bp) protein (562aa)
D-aminoacylase domain protein n=1 Tax=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) RepID=A7HU31_PARL1
D-aminoacylase domain-containing protein
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCN18_26_2_15_R5_B_scaffold_301_12
CN-SCN_Devosia_27x, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11801..12463
DNA (663bp) protein (221aa)
Glycerol-3-phosphate acyltransferase n=1 Tax=Bradyrhizobium sp. DFCI-1 RepID=U1IQQ7_9BRAD
Glycerol-3-phosphate acyltransferase {ECO:0000256|HAMAP-Rule:MF_01043}; Acyl-PO4 G3P acyltransferase {ECO:0000256|HAMAP-Rule:MF_01043}; Acyl-phosphate--glycerol-3-phosphate acyltransferase {ECO:0000256|HAMAP-Rule:MF_01043}; G3P acyltransferase {ECO:0000256|HAMAP-Rule:MF_01043}; Lysophosphatidic acid synthase {ECO:0000256|HAMAP-Rule:MF_01043}; TaxID=1619233 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. LTSPM299.;"
hypothetical protein
SCN18_26_2_15_R5_B_scaffold_301_13
SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12728..13027
DNA (300bp) protein (100aa)
Antibiotic biosynthesis monooxygenase n=1 Tax=Methylobacterium sp. (strain 4-46) RepID=B0UGX1_METS4
antibiotic biosynthesis monooxygenase
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCN18_26_2_15_R5_B_scaffold_301_14
SCNPILOT_SOLID2_TRIM150_Burkholderiales_66_35, SCNPILOT_SOLID2_TRIM150_Burkholderiales_66_35, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13024..13833
DNA (810bp) protein (270aa)
phytanoyl-CoA dioxygenase (EC:1.14.11.18)
Short chain dehydrogenase n=1 Tax=alpha proteobacterium BAL199 RepID=A8TQF3_9PROT
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCN18_26_2_15_R5_B_scaffold_301_15
SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7, SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13862..15049
DNA (1188bp) protein (396aa)
hypothetical protein n=1 Tax=Rhizobium loti RepID=UPI000364CB3B
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADL02385.1}; TaxID=633149 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas subvibrioides (strain ATCC 15264 / DSM 4735 / LMG 14903; / NBRC 16000 / CB 81) (Caulobacter subvibrioides).;"
SCN18_26_2_15_R5_B_scaffold_301_16
Brevundimonas diminuta_SCNPILOT_CONT_300_BF_Brevundimonas_67_6, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15054..15716)
DNA (663bp) protein (221aa)
hypothetical protein n=1 Tax=alpha proteobacterium L41A RepID=UPI0003711E81
transcriptional regulator, TetR family
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCN18_26_2_15_R5_B_scaffold_301_17
SCNpilot_P_inoc_Thiobacillus_strain2_63_34, SCNpilot_P_inoc_Thiobacillus_strain2_63_34, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15829..16977
DNA (1149bp) protein (383aa)
hypothetical protein n=1 Tax=Hyphomicrobium zavarzinii RepID=UPI000381AE25
Uncharacterized protein {ECO:0000313|EMBL:KJV09721.1}; TaxID=552518 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Elstera.;" source="Elstera litoralis.;"
putative RND efflux transporter
SCN18_26_2_15_R5_B_scaffold_301_18
SCNpilot_BF_INOC_Dechloromonas_67_13, SCNpilot_BF_INOC_Dechloromonas_67_13, SCNpilot_BF_INOC_Dechloromonas_67_13, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17020..20118
DNA (3099bp) protein (1033aa)
Putative RND efflux transporter n=1 Tax=Azospirillum lipoferum (strain 4B) RepID=G7ZEZ6_AZOL4
putative RND efflux transporter
Putative RND efflux transporter {ECO:0000313|EMBL:CBS89948.1}; TaxID=862719 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum.;" source="Azospirillum lipoferum (strain 4B).;"
SCN18_26_2_15_R5_B_scaffold_301_19
SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20132..21199)
DNA (1068bp) protein (356aa)
Zn-dependent oxidoreductase, NADPH:quinone reductase n=1 Tax=Bradyrhizobium sp. WSM1253 RepID=I2QUG9_9BRAD
alcohol dehydrogenase
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCN18_26_2_15_R5_B_scaffold_301_20
SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21308..22081
DNA (774bp) protein (258aa)
XRE family transcriptional regulator n=1 Tax=Mesorhizobium sp. WSM4349 RepID=UPI000380A875
hypothetical protein
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCN18_26_2_15_R5_B_scaffold_301_21
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22108..22902)
DNA (795bp) protein (265aa)
Short-chain dehydrogenase/reductase {ECO:0000313|EMBL:EGP08269.1}; EC=1.1.1.62 {ECO:0000313|EMBL:EGP08269.1};; TaxID=709797 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae.;" source="Bradyrhizobiaceae bacterium SG-6C.;"
Short-chain dehydrogenase/reductase n=1 Tax=Bradyrhizobiaceae bacterium SG-6C RepID=F7QKA0_9BRAD
short-chain dehydrogenase/reductase SDR
SCN18_26_2_15_R5_B_scaffold_301_22
SCNPILOT_CONT_750_BF_Rhodospirillales_70_18, SCNPILOT_CONT_750_BF_Rhodospirillales_70_18, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22899..23540)
DNA (642bp) protein (214aa)
hypothetical protein n=1 Tax=Alicyclobacillus pohliae RepID=UPI0003637F08
pyrrolidone-carboxylate peptidase
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCN18_26_2_15_R5_B_scaffold_301_23
SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23626..24423)
DNA (798bp) protein (266aa)
hypothetical protein n=1 Tax=Elioraea tepidiphila RepID=UPI00036D4B9D
molybdopterin dehydrogenase FAD-binding
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCN18_26_2_15_R5_B_scaffold_301_24
CN-SCN_Lautropia_89x, CN-SCN_Lautropia_89x, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24450..26837)
DNA (2388bp) protein (796aa)
Carbon monoxide dehydrogenase n=1 Tax=Oceanibaculum indicum P24 RepID=K2K401_9PROT
coxL2; carbon-monoxide dehydrogenase large subunit
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCN18_26_2_15_R5_B_scaffold_301_25
SCNPILOT_EXPT_1000_BF_Rhizobiales_69_8_partial, SCNPILOT_EXPT_1000_BF_Rhizobiales_69_8_partial, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26842..27327)
DNA (486bp) protein (162aa)
UPI0003D00594 related cluster n=1 Tax=unknown RepID=UPI0003D00594
carbon-monoxide dehydrogenase small subunit
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCN18_26_2_15_R5_B_scaffold_301_26
SCNPILOT_CONT_750_BF_Rhodospirillales_70_18, SCNPILOT_CONT_750_BF_Rhodospirillales_70_18, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27472..28116)
DNA (645bp) protein (215aa)
Putative Carbon monoxide dehydrogenase, coxG accessory protein n=1 Tax=Azospirillum brasilense Sp245 RepID=G8AQD2_AZOBR
putative Carbon monoxide dehydrogenase, coxG accessory protein
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCN18_26_2_15_R5_B_scaffold_301_27
Magnetospirillum gryphiswaldense_SCNpilot_P_inoc_Magnetospirillum_64_120, Magnetospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28139..30073)
DNA (1935bp) protein (645aa)
Putative glucan hydrolase n=1 Tax=Azospirillum lipoferum (strain 4B) RepID=G7ZGN0_AZOL4
Putative glucan hydrolase
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCN18_26_2_15_R5_B_scaffold_301_28
CN-SCN_Phenylobacterium_31x, RIFCSPHIGHO2_01_FULL_Phenylobacterium_69_31_curated, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(30189..31286)
DNA (1098bp) protein (366aa)
Uncharacterized protein n=1 Tax=Oceanibaculum indicum P24 RepID=K2KGF1_9PROT
hypothetical protein
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCN18_26_2_15_R5_B_scaffold_301_29
SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(31312..32067)
DNA (756bp) protein (252aa)
Fructokinase protein n=1 Tax=alpha proteobacterium RS24 RepID=U2WSL2_9PROT
dehydrogenase of unknown specificity, short-chain alcohol dehydrogenase like protein
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCN18_26_2_15_R5_B_scaffold_301_30
SCNPILOT_CONT_1000_BF_Chloroflexi_54_27, SCNPILOT_CONT_1000_BF_Chloroflexi_54_27, SCNPILOT_CONT_1000_BF_Chloroflexi_54_27, SCNPILOT_CONT_1000_BF_Chloroflexi_54_27, SCNPILOT_CONT_1000_BF_Chloroflexi_54_27, Bacteria

Not on your lists

comp(32082..33059)
DNA (978bp) protein (326aa)
NADPH:quinone oxidoreductase n=1 Tax=Pseudomonas alcaligenes OT 69 RepID=U3HFC5_PSEAC
putative zinc-containing alcohol dehydrogenase
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
Displaying items 1-30 of 50 in total

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