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SCN18_26_2_15_R5_F_scaffold_834

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Displaying 25 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_26_2_15_R5_F_scaffold_834_1
SCN_Comamonas_36x, SCN_Comamonas_36x, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(1..408)
DNA (408bp) protein (136aa)
Site-specific recombinase, phage integrase family n=1 Tax=Burkholderia multivorans ATCC BAA-247 RepID=J4RZ41_9BURK
integrase family protein
Integrase family protein {ECO:0000313|EMBL:ACS61998.1}; TaxID=428406 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Ralstonia.;" source="Ralstonia pickettii (strain 12D).;"
SCN18_26_2_15_R5_F_scaffold_834_trna_1
unknown

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comp(651..721)
DNA (71bp)
transferRNA Gly
SCN18_26_2_15_R5_F_scaffold_834_2
SCN_Thiomonas_15x, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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844..1332
DNA (489bp) protein (163aa)
Putative uncharacterized protein n=1 Tax=Thiomonas intermedia (strain K12) RepID=D5WZ11_THIK1
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADG30349.1}; TaxID=75379 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas intermedia (strain K12) (Thiobacillus intermedius).;"
SCN18_26_2_15_R5_F_scaffold_834_3
SCN_Thiomonas_15x, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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1334..2119
DNA (786bp) protein (262aa)
Putative uncharacterized protein n=1 Tax=Thiomonas intermedia (strain K12) RepID=D5WZ12_THIK1
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CDW94824.1}; TaxID=554131 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas sp. CB2.;"
SCN18_26_2_15_R5_F_scaffold_834_4
SCN_Thiomonas_15x, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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2157..3992
DNA (1836bp) protein (612aa)
Putative Bacterial type II secretion system protein E n=1 Tax=Thiomonas arsenitoxydans (strain DSM 22701 / CIP 110005 / 3As) RepID=D6CPH3_THIA3
Putative Bacterial type II secretion system protein E {ECO:0000313|EMBL:CAZ87903.1}; TaxID=426114 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas arsenitoxydans (strain DSM 22701 / CIP 110005 / 3As).;"
putative Bacterial type II secretion system protein E
SCN18_26_2_15_R5_F_scaffold_834_5
SCN_Thiomonas_15x, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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4009..4842
DNA (834bp) protein (278aa)
Putative uncharacterized protein n=1 Tax=Thiomonas intermedia (strain K12) RepID=D5WZ14_THIK1
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADG30352.1}; Flags: Precursor;; TaxID=75379 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas intermedia (strain K12) (Thiobacillus intermedius).;"
SCN18_26_2_15_R5_F_scaffold_834_6
SCN_Thiomonas_15x, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(5365..6201)
DNA (837bp) protein (279aa)
Putative Inositol monophosphatase {ECO:0000313|EMBL:CDW94829.1}; EC=3.1.3.25 {ECO:0000313|EMBL:CDW94829.1};; TaxID=554131 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas sp. CB2.;"
putative Inositol monophosphatase (EC:3.1.3.25)
Putative Inositol monophosphatase n=1 Tax=Thiomonas arsenitoxydans (strain DSM 22701 / CIP 110005 / 3As) RepID=D6CPH9_THIA3
SCN18_26_2_15_R5_F_scaffold_834_7
SCN_Thiomonas_15x, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6208..7773)
DNA (1566bp) protein (522aa)
L-aspartate oxidase {ECO:0000256|RuleBase:RU362049}; EC=1.4.3.16 {ECO:0000256|RuleBase:RU362049};; TaxID=554131 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas sp. CB2.;"
nadB; L-aspartate oxidase (LASPO) (Quinolinate synthetase B) (EC:1.4.3.16)
L-aspartate oxidase (LASPO) (Quinolinate synthetase B) n=1 Tax=Thiomonas arsenitoxydans (strain DSM 22701 / CIP 110005 / 3As) RepID=D6CPI0_THIA3
SCN18_26_2_15_R5_F_scaffold_834_8
SCN_Thiomonas_15x, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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7931..8710
DNA (780bp) protein (260aa)
Putative Class II aldolase/adducin n=1 Tax=Thiomonas arsenitoxydans (strain DSM 22701 / CIP 110005 / 3As) RepID=D6CPI1_THIA3
Putative Class II aldolase/adducin
Putative Class II aldolase/adducin {ECO:0000313|EMBL:CAZ87911.1}; TaxID=426114 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas arsenitoxydans (strain DSM 22701 / CIP 110005 / 3As).;"
SCN18_26_2_15_R5_F_scaffold_834_9
SCN_Thiomonas_15x, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(8741..9586)
DNA (846bp) protein (282aa)
Pantothenate synthetase {ECO:0000256|HAMAP-Rule:MF_00158}; Short=PS {ECO:0000256|HAMAP-Rule:MF_00158};; EC=6.3.2.1 {ECO:0000256|HAMAP-Rule:MF_00158};; Pantoate--beta-alanine ligase {ECO:0000256|HAMAP-Rule:MF_00158}; Pantoate-activating enzyme {ECO:0000256|HAMAP-Rule:MF_00158}; TaxID=554131 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas sp. CB2.;"
panC; Pantoate--beta-alanine ligase (Pantothenate synthetase) (Pantoate-activating enzyme) (EC:6.3.2.1)
Pantothenate synthetase n=1 Tax=Thiomonas arsenitoxydans (strain DSM 22701 / CIP 110005 / 3As) RepID=D6CPI2_THIA3
SCN18_26_2_15_R5_F_scaffold_834_10
SCN_Thiomonas_15x, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(9608..10468)
DNA (861bp) protein (287aa)
3-methyl-2-oxobutanoate hydroxymethyltransferase (EC:2.1.2.11)
3-methyl-2-oxobutanoate hydroxymethyltransferase {ECO:0000256|HAMAP-Rule:MF_00156, ECO:0000256|SAAS:SAAS00094725}; EC=2.1.2.11 {ECO:0000256|HAMAP-Rule:MF_00156, ECO:0000256|SAAS:SAAS00094725};; Ketopantoate hydroxymethyltransferase {ECO:0000256|HAMAP-Rule:MF_00156}; TaxID=75379 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas intermedia (strain K12) (Thiobacillus intermedius).;"
3-methyl-2-oxobutanoate hydroxymethyltransferase n=1 Tax=Thiomonas intermedia (strain K12) RepID=D5WZ20_THIK1
SCN18_26_2_15_R5_F_scaffold_834_11
SCN_Thiomonas_15x, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10553..11401)
DNA (849bp) protein (283aa)
Chromosome segregation and condensation protein ScpA n=1 Tax=Thiomonas intermedia (strain K12) RepID=D5WZ21_THIK1
Segregation and condensation protein A {ECO:0000256|SAAS:SAAS00093938}; TaxID=554131 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas sp. CB2.;"
chromosome segregation and condensation protein ScpA
SCN18_26_2_15_R5_F_scaffold_834_12
SCN_Thiomonas_15x, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11442..11639)
DNA (198bp) protein (66aa)
Uncharacterized protein n=2 Tax=Thiomonas RepID=D6CPI5_THIA3
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADG30360.1}; TaxID=75379 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas intermedia (strain K12) (Thiobacillus intermedius).;"
SCN18_26_2_15_R5_F_scaffold_834_13
SCN_Thiomonas_15x, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11879..13078
DNA (1200bp) protein (400aa)
Putative ammonium transporter n=1 Tax=Thiomonas arsenitoxydans (strain DSM 22701 / CIP 110005 / 3As) RepID=D6CPI7_THIA3
Putative ammonium transporter {ECO:0000313|EMBL:CDW94837.1}; TaxID=554131 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas sp. CB2.;"
putative ammonium transporter
SCN18_26_2_15_R5_F_scaffold_834_14
SCN_Thiomonas_15x, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13106..14518)
DNA (1413bp) protein (471aa)
Putative Metallo-dependent phosphatase n=1 Tax=Thiomonas arsenitoxydans (strain DSM 22701 / CIP 110005 / 3As) RepID=D6CPI8_THIA3
putative Metallo-dependent phosphatase
Putative Metallo-dependent phosphatase {ECO:0000313|EMBL:CAZ87918.1}; TaxID=426114 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas arsenitoxydans (strain DSM 22701 / CIP 110005 / 3As).;"
SCN18_26_2_15_R5_F_scaffold_834_15
SCN_Thiomonas_15x, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(14518..16788)
DNA (2271bp) protein (757aa)
Putative Porin n=1 Tax=Thiomonas arsenitoxydans (strain DSM 22701 / CIP 110005 / 3As) RepID=D6CPI9_THIA3
Putative Porin {ECO:0000313|EMBL:CAZ87919.1}; TaxID=426114 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas arsenitoxydans (strain DSM 22701 / CIP 110005 / 3As).;"
putative Porin
SCN18_26_2_15_R5_F_scaffold_834_16
SCN_Thiomonas_15x, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(17008..19671)
DNA (2664bp) protein (888aa)
Putative Quinoprotein amine dehydrogenase, beta chain-like n=1 Tax=Thiomonas arsenitoxydans (strain DSM 22701 / CIP 110005 / 3As) RepID=D6CPJ0_THIA3
Putative Quinoprotein amine dehydrogenase, beta chain-like {ECO:0000313|EMBL:CAZ87920.1}; TaxID=426114 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas arsenitoxydans (strain DSM 22701 / CIP 110005 / 3As).;"
putative Quinoprotein amine dehydrogenase, beta chain-like
SCN18_26_2_15_R5_F_scaffold_834_17
SCN_Thiomonas_15x, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19868..20353
DNA (486bp) protein (162aa)
Uncharacterized protein n=1 Tax=Thiomonas arsenitoxydans (strain DSM 22701 / CIP 110005 / 3As) RepID=D6CPJ1_THIA3
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CAZ87921.1}; TaxID=426114 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas arsenitoxydans (strain DSM 22701 / CIP 110005 / 3As).;"
SCN18_26_2_15_R5_F_scaffold_834_18
Thiomonas intermedia, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(20388..20963)
DNA (576bp) protein (192aa)
Putative uncharacterized protein n=1 Tax=Thiomonas intermedia (strain K12) RepID=D5WZ28_THIK1
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADG30366.1}; TaxID=75379 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas intermedia (strain K12) (Thiobacillus intermedius).;"
SCN18_26_2_15_R5_F_scaffold_834_19
SCN_Thiomonas_15x, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21008..21163)
DNA (156bp) protein (52aa)
ABC transporter ATP-binding membrane protein n=2 Tax=Thiomonas RepID=D5WZ29_THIK1
Uncharacterized protein {ECO:0000313|EMBL:CDW94852.1}; TaxID=554131 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas sp. CB2.;"
hypothetical protein; putative exported protein
SCN18_26_2_15_R5_F_scaffold_834_20
SCN_Thiomonas_15x, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21160..21903)
DNA (744bp) protein (248aa)
Putative High-affinity Fe2+/Pb2+ permease n=1 Tax=Thiomonas arsenitoxydans (strain DSM 22701 / CIP 110005 / 3As) RepID=D6CPJ3_THIA3
putative High-affinity Fe2+/Pb2+ permease
Putative High-affinity Fe2+/Pb2+ permease {ECO:0000313|EMBL:CAZ87923.1}; TaxID=426114 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas arsenitoxydans (strain DSM 22701 / CIP 110005 / 3As).;"
SCN18_26_2_15_R5_F_scaffold_834_21
SCN_Thiomonas_15x, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21903..23003)
DNA (1101bp) protein (367aa)
Fe(3+) ions import ATP-binding protein FbpC {ECO:0000313|EMBL:CDW94854.1}; EC=3.6.3.30 {ECO:0000313|EMBL:CDW94854.1};; TaxID=554131 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas sp. CB2.;"
putative ABC-type Fe3+ transport system, ATPase component (EC:3.6.3.30)
Putative ABC-type Fe3+ transport system, ATPase component n=1 Tax=Thiomonas arsenitoxydans (strain DSM 22701 / CIP 110005 / 3As) RepID=D6CPJ4_THIA3
SCN18_26_2_15_R5_F_scaffold_834_22
SCN_Thiomonas_15x, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23007..24728)
DNA (1722bp) protein (574aa)
Binding-protein-dependent transport systems inner membrane component n=1 Tax=Thiomonas intermedia (strain K12) RepID=D5WZ32_THIK1
Binding-protein-dependent transport systems inner membrane component {ECO:0000313|EMBL:ADG30370.1}; TaxID=75379 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas intermedia (strain K12) (Thiobacillus intermedius).;"
binding-protein-dependent transport system inner membrane protein
SCN18_26_2_15_R5_F_scaffold_834_23
SCN_Thiomonas_15x, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24748..25779)
DNA (1032bp) protein (344aa)
Extracellular solute-binding protein family 1 n=1 Tax=Thiomonas intermedia (strain K12) RepID=D5WZ33_THIK1
extracellular solute-binding protein
Extracellular solute-binding protein family 1 {ECO:0000313|EMBL:ADG30371.1}; Flags: Precursor;; TaxID=75379 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas intermedia (strain K12) (Thiobacillus intermedius).;"
SCN18_26_2_15_R5_F_scaffold_834_24
SCN_Thiomonas_15x, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25779..26075)
DNA (297bp) protein (99aa)
Putative TonB protein n=1 Tax=Thiomonas arsenitoxydans (strain DSM 22701 / CIP 110005 / 3As) RepID=D6CPJ7_THIA3
putative TonB protein
Putative TonB protein {ECO:0000313|EMBL:CAZ87927.1}; TaxID=426114 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas arsenitoxydans (strain DSM 22701 / CIP 110005 / 3As).;"
Displaying 25 items

View Taxonomy