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SCN18_26_2_15_R5_F_scaffold_845

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Displaying 26 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_26_2_15_R5_F_scaffold_845_1
SCN_Thiomonas_15x, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(2..301)
DNA (300bp) protein (100aa)
putative bifunctional RibF: riboflavin kinase (Flavokinase); FMN adenylyltransferase (FAD pyrophosphorylase) (FAD synthetase) (EC:2.7.7.2 2.7.1.26)
Riboflavin biosynthesis protein {ECO:0000256|PIRNR:PIRNR004491}; EC=2.7.1.26 {ECO:0000256|PIRNR:PIRNR004491, ECO:0000313|EMBL:CAZ88331.1};; EC=2.7.7.2 {ECO:0000256|PIRNR:PIRNR004491, ECO:0000313|EMBL:CAZ88331.1};; TaxID=426114 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas arsenitoxydans (strain DSM 22701 / CIP 110005 / 3As).;"
Putative bifunctional RibF: riboflavin kinase (Flavokinase) FMN adenylyltransferase (FAD pyrophosphorylase) (FAD synthetase) n=1 Tax=Thiomonas arsenitoxydans (strain DSM 22701 / CIP 110005 / 3As) RepID=D6CSR2_THIA3
SCN18_26_2_15_R5_F_scaffold_845_2
SCN_Thiomonas_15x, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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697..900
DNA (204bp) protein (68aa)
Cold-shock DNA-binding domain protein n=2 Tax=Thiomonas RepID=D5X0S1_THIK1
cold-shock protein
Cold-shock DNA-binding domain protein {ECO:0000313|EMBL:ADG30717.1}; TaxID=75379 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas intermedia (strain K12) (Thiobacillus intermedius).;"
SCN18_26_2_15_R5_F_scaffold_845_3
SCN_Thiomonas_15x, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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1007..1570
DNA (564bp) protein (188aa)
SNARE associated Golgi protein-related protein n=1 Tax=Thiomonas intermedia (strain K12) RepID=D5X0S2_THIK1
hypothetical protein
SNARE associated Golgi protein-related protein {ECO:0000313|EMBL:ADG30718.1}; TaxID=75379 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas intermedia (strain K12) (Thiobacillus intermedius).;"
SCN18_26_2_15_R5_F_scaffold_845_4
SCN_Thiomonas_15x, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(1559..2788)
DNA (1230bp) protein (410aa)
Tryptophan--tRNA ligase {ECO:0000313|EMBL:CDW95532.1}; EC=6.1.1.2 {ECO:0000313|EMBL:CDW95532.1};; TaxID=554131 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas sp. CB2.;"
putative Tryptophanyl-tRNA synthetase (EC:6.1.1.2)
Putative Tryptophanyl-tRNA synthetase n=1 Tax=Thiomonas arsenitoxydans (strain DSM 22701 / CIP 110005 / 3As) RepID=D6CSR6_THIA3
SCN18_26_2_15_R5_F_scaffold_845_5
SCN_Thiomonas_15x, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(2817..3476)
DNA (660bp) protein (220aa)
Putative Peptidase, M50 family n=1 Tax=Thiomonas arsenitoxydans (strain DSM 22701 / CIP 110005 / 3As) RepID=D6CSR7_THIA3
putative Peptidase, M50 family
Putative Peptidase, M50 family {ECO:0000313|EMBL:CAZ88336.1}; TaxID=426114 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas arsenitoxydans (strain DSM 22701 / CIP 110005 / 3As).;"
SCN18_26_2_15_R5_F_scaffold_845_6
SCN_Thiomonas_15x, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3567..4202)
DNA (636bp) protein (212aa)
Sua5/YciO/YrdC/YwlC family protein n=2 Tax=Thiomonas RepID=D5X0S5_THIK1
Sua5/YciO/YrdC/YwlC family protein
Sua5/YciO/YrdC/YwlC family protein {ECO:0000313|EMBL:ADG30721.1}; TaxID=75379 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas intermedia (strain K12) (Thiobacillus intermedius).;"
SCN18_26_2_15_R5_F_scaffold_845_7
SCN_Thiomonas_15x, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4214..5065)
DNA (852bp) protein (284aa)
Putative Phosphoesterase PHP family n=1 Tax=Thiomonas arsenitoxydans (strain DSM 22701 / CIP 110005 / 3As) RepID=D6CSR9_THIA3
putative Phosphoesterase PHP family
Putative Phosphoesterase PHP family {ECO:0000313|EMBL:CAZ88338.1}; TaxID=426114 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas arsenitoxydans (strain DSM 22701 / CIP 110005 / 3As).;"
SCN18_26_2_15_R5_F_scaffold_845_8
SCN_Thiomonas_15x, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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5104..5592
DNA (489bp) protein (163aa)
Cys-tRNA(Pro)/Cys-tRNA(Cys) deacylase {ECO:0000256|PIRNR:PIRNR006181}; EC=4.2.-.- {ECO:0000256|PIRNR:PIRNR006181};; TaxID=426114 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas arsenitoxydans (strain DSM 22701 / CIP 110005 / 3As).;"
Cys-tRNA(Pro)/Cys-tRNA(Cys) deacylase n=1 Tax=Thiomonas arsenitoxydans (strain DSM 22701 / CIP 110005 / 3As) RepID=D6CSS0_THIA3
putative prolyl-tRNA synthetase associated
SCN18_26_2_15_R5_F_scaffold_845_9
SCN_Thiomonas_15x, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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5604..6236
DNA (633bp) protein (211aa)
Glycerol-3-phosphate acyltransferase n=1 Tax=Thiomonas arsenitoxydans (strain DSM 22701 / CIP 110005 / 3As) RepID=D6CSS1_THIA3
hypothetical protein
Glycerol-3-phosphate acyltransferase {ECO:0000256|HAMAP-Rule:MF_01043}; Acyl-PO4 G3P acyltransferase {ECO:0000256|HAMAP-Rule:MF_01043}; Acyl-phosphate--glycerol-3-phosphate acyltransferase {ECO:0000256|HAMAP-Rule:MF_01043}; G3P acyltransferase {ECO:0000256|HAMAP-Rule:MF_01043}; Lysophosphatidic acid synthase {ECO:0000256|HAMAP-Rule:MF_01043}; TaxID=554131 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas sp. CB2.;"
SCN18_26_2_15_R5_F_scaffold_845_10
SCN_Thiomonas_15x, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6251..6934)
DNA (684bp) protein (228aa)
Putative uncharacterized protein n=1 Tax=Thiomonas intermedia (strain K12) RepID=D5X0S9_THIK1
Uncharacterized protein {ECO:0000313|EMBL:CDW95543.1}; TaxID=554131 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas sp. CB2.;"
hypothetical protein
SCN18_26_2_15_R5_F_scaffold_845_11
SCN_Thiomonas_15x, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6941..7426)
DNA (486bp) protein (162aa)
UPF0234 protein THI_1666 n=1 Tax=Thiomonas arsenitoxydans (strain DSM 22701 / CIP 110005 / 3As) RepID=D6CSS3_THIA3
hypothetical protein
UPF0234 protein THI_1666 {ECO:0000256|HAMAP-Rule:MF_00632}; TaxID=426114 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas arsenitoxydans (strain DSM 22701 / CIP 110005 / 3As).;"
SCN18_26_2_15_R5_F_scaffold_845_12
SCN_Thiomonas_15x, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7470..8495
DNA (1026bp) protein (342aa)
UDP-N-acetylenolpyruvoylglucosamine reductase (EC:1.1.1.158)
UDP-N-acetylenolpyruvoylglucosamine reductase {ECO:0000256|HAMAP-Rule:MF_00037, ECO:0000256|SAAS:SAAS00041869}; EC=1.3.1.98 {ECO:0000256|HAMAP-Rule:MF_00037, ECO:0000256|SAAS:SAAS00057125};; UDP-N-acetylmuramate dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00037}; TaxID=75379 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas intermedia (strain K12) (Thiobacillus intermedius).;"
UDP-N-acetylenolpyruvoylglucosamine reductase n=1 Tax=Thiomonas intermedia (strain K12) RepID=D5X0T1_THIK1
SCN18_26_2_15_R5_F_scaffold_845_13
SCN_Thiomonas_15x, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8495..8833
DNA (339bp) protein (113aa)
Putative uncharacterized protein n=1 Tax=Thiomonas intermedia (strain K12) RepID=D5X0T2_THIK1
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADG30728.1}; TaxID=75379 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas intermedia (strain K12) (Thiobacillus intermedius).;"
SCN18_26_2_15_R5_F_scaffold_845_14
SCN_Thiomonas_15x, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8849..9382
DNA (534bp) protein (178aa)
peptide deformylase (EC:3.5.1.88)
Peptide deformylase {ECO:0000256|HAMAP-Rule:MF_00163, ECO:0000256|RuleBase:RU003335}; Short=PDF {ECO:0000256|HAMAP-Rule:MF_00163};; EC=3.5.1.88 {ECO:0000256|HAMAP-Rule:MF_00163, ECO:0000256|SAAS:SAAS00013131};; Polypeptide deformylase {ECO:0000256|HAMAP-Rule:MF_00163}; TaxID=75379 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas intermedia (strain K12) (Thiobacillus intermedius).;"
Peptide deformylase n=1 Tax=Thiomonas intermedia (strain K12) RepID=D5X0T3_THIK1
SCN18_26_2_15_R5_F_scaffold_845_15
SCN_Thiomonas_15x, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(9387..10058)
DNA (672bp) protein (224aa)
Putative uncharacterized protein n=1 Tax=Thiomonas intermedia (strain K12) RepID=D5X0T4_THIK1
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADG30730.1}; TaxID=75379 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas intermedia (strain K12) (Thiobacillus intermedius).;"
SCN18_26_2_15_R5_F_scaffold_845_16
SCN_Thiomonas_15x, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10672..13524
DNA (2853bp) protein (951aa)
2-oxoglutarate dehydrogenase, E1 subunit {ECO:0000313|EMBL:ADG30731.1}; EC=1.2.4.2 {ECO:0000313|EMBL:ADG30731.1};; TaxID=75379 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas intermedia (strain K12) (Thiobacillus intermedius).;"
2-oxoglutarate dehydrogenase, E1 subunit (EC:1.2.4.2)
2-oxoglutarate dehydrogenase, E1 subunit n=1 Tax=Thiomonas intermedia (strain K12) RepID=D5X0T5_THIK1
SCN18_26_2_15_R5_F_scaffold_845_17
SCN_Thiomonas_15x, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13657..14967
DNA (1311bp) protein (437aa)
sucB; Dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex (E2) (Dihydrolipoamide succinyltransferase component of 2-oxoglutarate dehydrogenase complex) (EC:2.3.1.61)
Dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex; EC=2.3.1.61 {ECO:0000313|EMBL:CAZ88348.1};; 2-oxoglutarate dehydrogenase complex component E2 {ECO:0000256|RuleBase:RU361138}; TaxID=426114 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas arsenitoxydans (strain DSM 22701 / CIP 110005 / 3As).;"
Dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex (E2) (Dihydrolipoamide succinyltransferase component of 2-oxoglutarate dehydrogenase complex) n=1 Tax=Thiomonas arsenitoxydans (strain DSM 22701 / CIP 110005 / 3As) RepID=D6CSS9_THIA3
SCN18_26_2_15_R5_F_scaffold_845_18
SCN_Thiomonas_15x, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15041..16474
DNA (1434bp) protein (478aa)
odhL; Dihydrolipoyl dehydrogenase (E3 component of 2-oxoglutarate dehydrogenase complex) (Dihydrolipoamide dehydrogenase) (EC:1.8.1.4)
Dihydrolipoyl dehydrogenase {ECO:0000256|RuleBase:RU003692}; EC=1.8.1.4 {ECO:0000256|RuleBase:RU003692, ECO:0000313|EMBL:CAZ88349.1};; TaxID=426114 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas arsenitoxydans (strain DSM 22701 / CIP 110005 / 3As).;"
Dihydrolipoyl dehydrogenase (E3 component of 2-oxoglutarate dehydrogenase complex) (Dihydrolipoamide dehydrogenase) n=1 Tax=Thiomonas arsenitoxydans (strain DSM 22701 / CIP 110005 / 3As) RepID=D6CST0_THIA3
SCN18_26_2_15_R5_F_scaffold_845_19
SCN_Thiomonas_15x, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16485..17582
DNA (1098bp) protein (366aa)
Putative AFG1-like ATPase n=1 Tax=Thiomonas arsenitoxydans (strain DSM 22701 / CIP 110005 / 3As) RepID=D6CST1_THIA3
putative AFG1-like ATPase
Putative AFG1-like ATPase {ECO:0000313|EMBL:CAZ88350.1}; TaxID=426114 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas arsenitoxydans (strain DSM 22701 / CIP 110005 / 3As).;"
SCN18_26_2_15_R5_F_scaffold_845_20
SCN_Thiomonas_15x, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17579..18298
DNA (720bp) protein (240aa)
Uncharacterized protein n=1 Tax=Thiomonas arsenitoxydans (strain DSM 22701 / CIP 110005 / 3As) RepID=D6CST2_THIA3
Uncharacterized protein {ECO:0000313|EMBL:CDW95557.1}; TaxID=554131 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas sp. CB2.;"
Hypothetical protein
SCN18_26_2_15_R5_F_scaffold_845_21
SCN_Thiomonas_15x, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18326..19651
DNA (1326bp) protein (442aa)
MscS Mechanosensitive ion channel n=1 Tax=Thiomonas intermedia (strain K12) RepID=D5X0U0_THIK1
MscS Mechanosensitive ion channel {ECO:0000313|EMBL:CDW95558.1}; TaxID=554131 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas sp. CB2.;"
mechanosensitive ion channel protein MscS
SCN18_26_2_15_R5_F_scaffold_845_22
SCN_Thiomonas_15x, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19724..21367
DNA (1644bp) protein (548aa)
AMP-dependent synthetase and ligase n=1 Tax=Thiomonas intermedia (strain K12) RepID=D5X0U1_THIK1
Putative AMP-dependent synthetase/ligase {ECO:0000313|EMBL:CDW95559.1}; TaxID=554131 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas sp. CB2.;"
AMP-dependent synthetase and ligase
SCN18_26_2_15_R5_F_scaffold_845_23
SCN_Thiomonas_15x, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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21561..22310
DNA (750bp) protein (250aa)
Electron transfer flavoprotein alpha/beta-subunit n=1 Tax=Thiomonas intermedia (strain K12) RepID=D5X0U2_THIK1
Electron transfer flavoprotein beta-subunit {ECO:0000313|EMBL:CDW95560.1}; TaxID=554131 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas sp. CB2.;"
electron transfer flavoprotein subunit alpha/beta
SCN18_26_2_15_R5_F_scaffold_845_24
SCN_Thiomonas_15x, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22362..23294
DNA (933bp) protein (311aa)
Electron transfer flavoprotein alpha-subunit (Alpha-ETF)(Electron transfer flavoprotein large subunit) (ETFLS) n=1 Tax=Thiomonas arsenitoxydans (strain DSM 22701 / CIP 110005 / 3As) RepID=D6CST6_THIA3
etfA; electron transfer flavoprotein alpha-subunit (Alpha-ETF)(Electron transfer flavoprotein large subunit) (ETFLS)
Electron transfer flavoprotein alpha-subunit (Alpha-ETF)(Electron transfer flavoprotein large subunit) (ETFLS) {ECO:0000313|EMBL:CAZ88355.1}; TaxID=426114 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas arsenitoxydans (strain DSM 22701 / CIP 110005 / 3As).;"
SCN18_26_2_15_R5_F_scaffold_845_25
SCN_Thiomonas_15x, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23385..25169
DNA (1785bp) protein (595aa)
Acyl-CoA dehydrogenase domain protein n=1 Tax=Thiomonas intermedia (strain K12) RepID=D5X0U4_THIK1
Acyl-CoA dehydrogenase domain protein {ECO:0000313|EMBL:CDW95563.1}; TaxID=554131 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas sp. CB2.;"
acyl-CoA dehydrogenase
SCN18_26_2_15_R5_F_scaffold_845_26
SCN_Thiomonas_15x, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25171..25875
DNA (705bp) protein (235aa)
2-nitropropane dioxygenase NPD n=1 Tax=Thiomonas intermedia (strain K12) RepID=D5X0U5_THIK1
2-nitropropane dioxygenase
2-nitropropane dioxygenase NPD {ECO:0000313|EMBL:ADG30741.1}; TaxID=75379 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas intermedia (strain K12) (Thiobacillus intermedius).;"
Displaying 26 items

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