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SCN18_26_2_15_R5_F_scaffold_887

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Displaying 24 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_26_2_15_R5_F_scaffold_887_1
SCN_Thiomonas_15x, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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474..821
DNA (348bp) protein (116aa)
Excalibur domain protein n=1 Tax=Thiomonas intermedia (strain K12) RepID=D5X5Q0_THIK1
excalibur domain-containing protein
Excalibur domain protein {ECO:0000313|EMBL:ADG29953.1}; TaxID=75379 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas intermedia (strain K12) (Thiobacillus intermedius).;"
SCN18_26_2_15_R5_F_scaffold_887_2
SCN_Thiomonas_15x, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(849..2309)
DNA (1461bp) protein (487aa)
Major facilitator superfamily MFS_1 n=1 Tax=Thiomonas intermedia (strain K12) RepID=D5X5P9_THIK1
major facilitator superfamily protein
Major facilitator superfamily MFS_1 {ECO:0000313|EMBL:ADG29952.1}; TaxID=75379 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas intermedia (strain K12) (Thiobacillus intermedius).;"
SCN18_26_2_15_R5_F_scaffold_887_3
SCN_Thiomonas_15x, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(2352..3326)
DNA (975bp) protein (325aa)
Aminoglycoside phosphotransferase n=1 Tax=Thiomonas intermedia (strain K12) RepID=D5X5P8_THIK1
Protein RdoA {ECO:0000313|EMBL:CDW92367.1}; TaxID=554131 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas sp. CB2.;"
aminoglycoside phosphotransferase
SCN18_26_2_15_R5_F_scaffold_887_4
SCN_Thiomonas_15x, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(3354..3896)
DNA (543bp) protein (181aa)
YaeQ family protein n=1 Tax=Thiomonas intermedia (strain K12) RepID=D5X5P7_THIK1
YaeQ family protein
YaeQ family protein {ECO:0000313|EMBL:ADG29950.1}; TaxID=75379 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas intermedia (strain K12) (Thiobacillus intermedius).;"
SCN18_26_2_15_R5_F_scaffold_887_5
SCNPILOT_CONT_1000_BF_Mesorhizobium_65_39, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3988..4908)
DNA (921bp) protein (307aa)
Putative Bacterial regulatory protein, LysR, ycjZ n=1 Tax=Thiomonas arsenitoxydans (strain DSM 22701 / CIP 110005 / 3As) RepID=D6CS17_THIA3
Putative Bacterial regulatory protein, LysR, ycjZ
Putative Bacterial regulatory protein, LysR, ycjZ {ECO:0000313|EMBL:CAZ87408.1}; TaxID=426114 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas arsenitoxydans (strain DSM 22701 / CIP 110005 / 3As).;"
SCN18_26_2_15_R5_F_scaffold_887_6
SCNPILOT_CONT_1000_BF_Chloroflexi_54_27, SCNPILOT_CONT_1000_BF_Chloroflexi_54_27, SCNPILOT_CONT_1000_BF_Chloroflexi_54_27, SCNPILOT_CONT_1000_BF_Chloroflexi_54_27, SCNPILOT_CONT_1000_BF_Chloroflexi_54_27, Bacteria

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5150..6145
DNA (996bp) protein (332aa)
Putative Pyridoxine 4-dehydrogenase (EC:1.1.1.65)
Putative Pyridoxine 4-dehydrogenase {ECO:0000313|EMBL:CAZ87407.1}; EC=1.1.1.65 {ECO:0000313|EMBL:CAZ87407.1};; TaxID=426114 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas arsenitoxydans (strain DSM 22701 / CIP 110005 / 3As).;"
Putative Pyridoxine 4-dehydrogenase n=1 Tax=Thiomonas arsenitoxydans (strain DSM 22701 / CIP 110005 / 3As) RepID=D6CS16_THIA3
SCN18_26_2_15_R5_F_scaffold_887_7
SCNPILOT_CONT_1000_BF_Mesorhizobium_65_39, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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6187..7170
DNA (984bp) protein (328aa)
Putative Pyridoxine 4-dehydrogenase (EC:1.1.1.65)
Putative Pyridoxine 4-dehydrogenase {ECO:0000313|EMBL:CAZ87406.1}; EC=1.1.1.65 {ECO:0000313|EMBL:CAZ87406.1};; TaxID=426114 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas arsenitoxydans (strain DSM 22701 / CIP 110005 / 3As).;"
Putative Pyridoxine 4-dehydrogenase n=1 Tax=Thiomonas arsenitoxydans (strain DSM 22701 / CIP 110005 / 3As) RepID=D6CS15_THIA3
SCN18_26_2_15_R5_F_scaffold_887_8
SCN_Thiomonas_15x, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7198..8724)
DNA (1527bp) protein (509aa)
Putative Tetracycline resistance protein TetB n=1 Tax=Thiomonas arsenitoxydans (strain DSM 22701 / CIP 110005 / 3As) RepID=D6CS14_THIA3
Major facilitator superfamily MFS_1 {ECO:0000313|EMBL:CDW92369.1}; TaxID=554131 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas sp. CB2.;"
putative Tetracycline resistance protein TetB
SCN18_26_2_15_R5_F_scaffold_887_9
SCN_Thiomonas_15x, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(8833..9495)
DNA (663bp) protein (221aa)
Putative uncharacterized protein n=1 Tax=Thiomonas intermedia (strain K12) RepID=D5X5P5_THIK1
Uncharacterized protein {ECO:0000313|EMBL:CDW92370.1}; TaxID=554131 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas sp. CB2.;"
hypothetical protein
SCN18_26_2_15_R5_F_scaffold_887_10
SCN_Thiomonas_15x, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9812..12211
DNA (2400bp) protein (800aa)
Diguanylate cyclase/phosphodiesterase n=1 Tax=Thiomonas intermedia (strain K12) RepID=D5X5P4_THIK1
Diguanylate cyclase/phosphodiesterase {ECO:0000313|EMBL:CDW92372.1}; TaxID=554131 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas sp. CB2.;"
diguanylate cyclase/phosphodiesterase
SCN18_26_2_15_R5_F_scaffold_887_11
SCN_Thiomonas_15x, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12378..14783
DNA (2406bp) protein (802aa)
Diguanylate cyclase/phosphodiesterase n=1 Tax=Thiomonas intermedia (strain K12) RepID=D5X5P3_THIK1
Diguanylate cyclase/phosphodiesterase {ECO:0000313|EMBL:CDW92373.1}; TaxID=554131 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas sp. CB2.;"
diguanylate cyclase/phosphodiesterase
SCN18_26_2_15_R5_F_scaffold_887_12
SCN_Thiomonas_15x, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14789..15994)
DNA (1206bp) protein (402aa)
Phosphoribosylglycinamide formyltransferase 2 {ECO:0000256|HAMAP-Rule:MF_01643, ECO:0000256|SAAS:SAAS00083136}; Short=GART 2 {ECO:0000256|HAMAP-Rule:MF_01643};; EC=2.1.2.- {ECO:0000256|HAMAP-Rule:MF_01643, ECO:0000256|SAAS:SAAS00083135};; 5'-phosphoribosylglycinamide transformylase 2 {ECO:0000256|HAMAP-Rule:MF_01643}; Formate-dependent GAR transformylase {ECO:0000256|HAMAP-Rule:MF_01643}; GAR transformylase 2 {ECO:0000256|HAMAP-Rule:MF_01643}; TaxID=554131 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas sp. CB2.;"
purT; Phosphoribosylglycinamide formyltransferase 2 (GART 2) (GAR transformylase 2) (5'-phosphoribosylglycinamide transformylase 2) (Formate-dependent GAR transformylase) (EC:2.1.2.-)
Phosphoribosylglycinamide formyltransferase 2 n=1 Tax=Thiomonas arsenitoxydans (strain DSM 22701 / CIP 110005 / 3As) RepID=D6CS10_THIA3
SCN18_26_2_15_R5_F_scaffold_887_13
SCN_Thiomonas_15x, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16013..16660)
DNA (648bp) protein (216aa)
Uncharacterized protein n=1 Tax=Thiomonas arsenitoxydans (strain DSM 22701 / CIP 110005 / 3As) RepID=D6CS09_THIA3
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CAZ87400.1}; TaxID=426114 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas arsenitoxydans (strain DSM 22701 / CIP 110005 / 3As).;"
SCN18_26_2_15_R5_F_scaffold_887_14
SCN_Thiomonas_15x, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16772..17686
DNA (915bp) protein (305aa)
acetylglutamate kinase (EC:2.7.2.8)
Acetylglutamate kinase {ECO:0000313|EMBL:CDW92376.1}; EC=2.7.2.8 {ECO:0000313|EMBL:CDW92376.1};; TaxID=554131 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas sp. CB2.;"
Acetylglutamate kinase n=1 Tax=Thiomonas intermedia (strain K12) RepID=D5X5P0_THIK1
SCN18_26_2_15_R5_F_scaffold_887_15
SCN_Thiomonas_15x, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17683..18366
DNA (684bp) protein (228aa)
ATP binding protein n=1 Tax=Thiomonas intermedia (strain K12) RepID=D5X5N9_THIK1
ATP-binding protein
ATP binding protein {ECO:0000313|EMBL:ADG29942.1}; TaxID=75379 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas intermedia (strain K12) (Thiobacillus intermedius).;"
SCN18_26_2_15_R5_F_scaffold_887_16
SCN_Thiomonas_15x, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18356..19075
DNA (720bp) protein (240aa)
Pyrimidine 5'-nucleotidase n=1 Tax=Thiomonas intermedia (strain K12) RepID=D5X5N8_THIK1
pyrimidine 5'-nucleotidase
Pyrimidine 5'-nucleotidase {ECO:0000313|EMBL:ADG29941.1}; TaxID=75379 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas intermedia (strain K12) (Thiobacillus intermedius).;"
SCN18_26_2_15_R5_F_scaffold_887_17
SCN_Thiomonas_15x, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19094..19951)
DNA (858bp) protein (286aa)
Pyrroline-5-carboxylate reductase {ECO:0000256|HAMAP-Rule:MF_01925, ECO:0000256|RuleBase:RU003903}; Short=P5C reductase {ECO:0000256|HAMAP-Rule:MF_01925};; Short=P5CR {ECO:0000256|HAMAP-Rule:MF_01925};; EC=1.5.1.2 {ECO:0000256|HAMAP-Rule:MF_01925, ECO:0000256|RuleBase:RU003903};; PCA reductase {ECO:0000256|HAMAP-Rule:MF_01925}; TaxID=554131 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas sp. CB2.;"
proC; Pyrroline-5-carboxylate reductase (P5CR) (P5C reductase) (EC:1.5.1.2)
Pyrroline-5-carboxylate reductase n=1 Tax=Thiomonas arsenitoxydans (strain DSM 22701 / CIP 110005 / 3As) RepID=D6CS02_THIA3
SCN18_26_2_15_R5_F_scaffold_887_18
SCN_Thiomonas_15x, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20007..20834
DNA (828bp) protein (276aa)
Peptidase M22 glycoprotease n=1 Tax=Thiomonas intermedia (strain K12) RepID=D5X5N6_THIK1
peptidase M22 glycoprotease
Peptidase M22 glycoprotease {ECO:0000313|EMBL:ADG29939.1}; TaxID=75379 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas intermedia (strain K12) (Thiobacillus intermedius).;"
SCN18_26_2_15_R5_F_scaffold_887_19
SCN_Thiomonas_15x, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20831..21385
DNA (555bp) protein (185aa)
Putative Ribosomal-protein-alanine acetyltransferase RimI (EC:2.3.1.128)
Putative Ribosomal-protein-alanine acetyltransferase RimI {ECO:0000313|EMBL:CAZ87391.1}; EC=2.3.1.128 {ECO:0000313|EMBL:CAZ87391.1};; TaxID=426114 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas arsenitoxydans (strain DSM 22701 / CIP 110005 / 3As).;"
Putative Ribosomal-protein-alanine acetyltransferase RimI n=1 Tax=Thiomonas arsenitoxydans (strain DSM 22701 / CIP 110005 / 3As) RepID=D6CS00_THIA3
SCN18_26_2_15_R5_F_scaffold_887_20
SCN_Thiomonas_15x, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21401..22264
DNA (864bp) protein (288aa)
Phage SPO1 DNA polymerase-related protein n=1 Tax=Thiomonas intermedia (strain K12) RepID=D5X5N4_THIK1
phage SPO1 DNA polymerase-like protein
Phage SPO1 DNA polymerase-related protein {ECO:0000313|EMBL:ADG29937.1}; TaxID=75379 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas intermedia (strain K12) (Thiobacillus intermedius).;"
SCN18_26_2_15_R5_F_scaffold_887_21
SCN_Thiomonas_15x, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22480..22779
DNA (300bp) protein (100aa)
Putative uncharacterized protein n=1 Tax=Thiomonas intermedia (strain K12) RepID=D5X5N3_THIK1
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADG29936.1}; TaxID=75379 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas intermedia (strain K12) (Thiobacillus intermedius).;"
SCN18_26_2_15_R5_F_scaffold_887_22
SCN_Thiomonas_15x, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(22853..23218)
DNA (366bp) protein (122aa)
Cytochrome c class I n=1 Tax=Thiomonas intermedia (strain K12) RepID=D5X5N2_THIK1
Cytochrome c class I {ECO:0000313|EMBL:CDW92387.1}; TaxID=554131 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas sp. CB2.;"
cytochrome c class I
SCN18_26_2_15_R5_F_scaffold_887_23
SCN_Thiomonas_15x, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(23237..23602)
DNA (366bp) protein (122aa)
Cytochrome c class I n=1 Tax=Thiomonas intermedia (strain K12) RepID=D5X5N1_THIK1
cytochrome c class I
Cytochrome c class I {ECO:0000313|EMBL:ADG29934.1}; Flags: Precursor;; TaxID=75379 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas intermedia (strain K12) (Thiobacillus intermedius).;"
SCN18_26_2_15_R5_F_scaffold_887_24
SCN_Thiomonas_15x, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23713..24327)
DNA (615bp) protein (205aa)
Putative uncharacterized protein n=1 Tax=Thiomonas intermedia (strain K12) RepID=D5X5N0_THIK1
Uncharacterized protein {ECO:0000313|EMBL:CDW92390.1}; TaxID=554131 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas sp. CB2.;"
hypothetical protein
Displaying 24 items

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