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SCN18_26_2_15_R5_F_scaffold_1460

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Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_26_2_15_R5_F_scaffold_1460_1
SCN_Comamonas_36x, SCN_Comamonas_36x, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(233..2068)
DNA (1836bp) protein (612aa)
capD; UDP-glucose 4-epimerase (EC:5.1.3.2)
UDP-glucose 4-epimerase {ECO:0000313|EMBL:CAZ87315.1}; EC=5.1.3.2 {ECO:0000313|EMBL:CAZ87315.1};; TaxID=426114 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas arsenitoxydans (strain DSM 22701 / CIP 110005 / 3As).;"
UDP-glucose 4-epimerase n=1 Tax=Thiomonas arsenitoxydans (strain DSM 22701 / CIP 110005 / 3As) RepID=D6CRS4_THIA3
SCN18_26_2_15_R5_F_scaffold_1460_2
SCN_Comamonas_36x, SCN_Comamonas_36x, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(2065..3573)
DNA (1509bp) protein (503aa)
putative Glutamine--scyllo-inositol transaminase (EC:2.6.1.50)
DegT/DnrJ/EryC1/StrS aminotransferase n=1 Tax=Thiomonas intermedia (strain K12) RepID=D5X575_THIK1
DegT/DnrJ/EryC1/StrS aminotransferase {ECO:0000313|EMBL:CDW92418.1}; TaxID=554131 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas sp. CB2.;"
SCN18_26_2_15_R5_F_scaffold_1460_3
SCN_Comamonas_36x, SCN_Comamonas_36x, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(3570..4220)
DNA (651bp) protein (217aa)
Sugar O-acyltransferase, sialic acid O-acetyltransferase NeuD family n=1 Tax=Thiomonas intermedia (strain K12) RepID=D5X576_THIK1
sugar O-acyltransferase, sialic acid O-acetyltransferase NeuD family
Sugar O-acyltransferase, sialic acid O-acetyltransferase NeuD family {ECO:0000313|EMBL:ADG29900.1}; TaxID=75379 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas intermedia (strain K12) (Thiobacillus intermedius).;"
SCN18_26_2_15_R5_F_scaffold_1460_4
SCN_Comamonas_36x, SCN_Comamonas_36x, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(4228..5556)
DNA (1329bp) protein (443aa)
UDP-N-acetyl-D-glucosamine 2-epimerase, UDP-hydrolysing n=1 Tax=Thiomonas intermedia (strain K12) RepID=D5X577_THIK1
UDP-N-acetyl-D-glucosamine 2-epimerase
UDP-N-acetyl-D-glucosamine 2-epimerase, UDP-hydrolysing {ECO:0000313|EMBL:ADG29901.1}; TaxID=75379 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas intermedia (strain K12) (Thiobacillus intermedius).;"
SCN18_26_2_15_R5_F_scaffold_1460_5
SCN_Comamonas_36x, SCN_Comamonas_36x, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(6324..6740)
DNA (417bp) protein (139aa)
Ribonuclease VapC {ECO:0000256|HAMAP-Rule:MF_00265}; Short=RNase VapC {ECO:0000256|HAMAP-Rule:MF_00265};; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00265};; Toxin VapC {ECO:0000256|HAMAP-Rule:MF_00265}; TaxID=522306 species="Bacteria; Proteobacteria; Betaproteobacteria; Candidatus Accumulibacter.;" source="Accumulibacter phosphatis (strain UW-1).;"
hypothetical protein n=1 Tax=Caldimonas manganoxidans RepID=UPI000373770B
PilT protein domain-containing protein
SCN18_26_2_15_R5_F_scaffold_1460_6
SCN_Comamonas_36x, SCN_Comamonas_36x, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(6745..6996)
DNA (252bp) protein (84aa)
hypothetical protein n=1 Tax=Caldimonas manganoxidans RepID=UPI000374EFF7
prevent-host-death family protein
Prevent-host-death family protein {ECO:0000313|EMBL:ACV33893.1}; TaxID=522306 species="Bacteria; Proteobacteria; Betaproteobacteria; Candidatus Accumulibacter.;" source="Accumulibacter phosphatis (strain UW-1).;"
SCN18_26_2_15_R5_F_scaffold_1460_7
SCN_Comamonas_36x, SCN_Comamonas_36x, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7025..8857)
DNA (1833bp) protein (611aa)
Nerd domain protein id=1267953 bin=GWE1_Burkholderiales_65_30 species=Hydrogenophaga sp. PBC genus=Hydrogenophaga taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_Burkholderiales_65_30 organism_group=Betaproteobacteria
hypothetical protein
Tax=BJP_08E140C01_Burkholderiales_65_30
SCN18_26_2_15_R5_F_scaffold_1460_8
SCN_Comamonas_36x, SCN_Comamonas_36x, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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9032..9274
DNA (243bp) protein (81aa)
antitoxin n=1 Tax=Methylotenera sp. 1P/1 RepID=UPI00038209B1
prevent-host-death family protein
Tax=RIFCSPHIGHO2_02_FULL_Gammaproteobacteria_60_43_curated
SCN18_26_2_15_R5_F_scaffold_1460_9
SCN_Comamonas_36x, SCN_Comamonas_36x, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9556..10035)
DNA (480bp) protein (160aa)
N-acetylneuraminate synthase (EC:2.5.1.56)
N-acetylneuraminate synthase {ECO:0000313|EMBL:ADG31993.1}; EC=2.5.1.56 {ECO:0000313|EMBL:ADG31993.1};; TaxID=75379 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas intermedia (strain K12) (Thiobacillus intermedius).;"
N-acetylneuraminate synthase n=1 Tax=Thiomonas intermedia (strain K12) RepID=D5X676_THIK1
SCN18_26_2_15_R5_F_scaffold_1460_10
SCN_Comamonas_36x, SCN_Comamonas_36x, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10234..10791)
DNA (558bp) protein (186aa)
Chromosomal replication initiator protein dnaA n=1 Tax=Pseudomonas pseudoalcaligenes CECT 5344 RepID=I7K7U4_PSEPS
istB1; Chromosomal replication initiator protein dnaA
Chromosomal replication initiator protein dnaA {ECO:0000313|EMBL:CDM40491.1}; TaxID=1182590 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas; Pseudomonas oleovorans/pseudoalcaligenes group.;" source="Pseudomonas pseudoalcaligenes CECT 5344.;"
SCN18_26_2_15_R5_F_scaffold_1460_11
SCN_Comamonas_36x, SCN_Comamonas_36x, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10793..11320)
DNA (528bp) protein (176aa)
Transposase for insertion sequences IS1326/IS1353 n=1 Tax=Pseudomonas pseudoalcaligenes CECT 5344 RepID=I7IE22_PSEPS
istA3; Transposase for insertion sequences IS1326/IS1353
Tax=BJP_08E140C01_10KDA_Burkholderiales_65_51
SCN18_26_2_15_R5_F_scaffold_1460_12
SCN_Comamonas_36x, SCN_Comamonas_36x, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11262..11687)
DNA (426bp) protein (142aa)
Transposase for insertion sequences IS1326/IS1353 n=1 Tax=Pseudomonas pseudoalcaligenes CECT 5344 RepID=I7IE22_PSEPS
istA3; Transposase for insertion sequences IS1326/IS1353
Tax=BJP_08E140C01_10KDA_Burkholderiales_65_51
SCN18_26_2_15_R5_F_scaffold_1460_13
SCN_Comamonas_36x, SCN_Comamonas_36x, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11665..12342)
DNA (678bp) protein (226aa)
Transposase of ISThsp19, IS21 family, ORFA n=1 Tax=Thiomonas arsenitoxydans (strain DSM 22701 / CIP 110005 / 3As) RepID=D6CM91_THIA3
istA; transposase of ISThsp19, IS21 family, ORFA
Transposase of ISThsp19, IS21 family, ORFA {ECO:0000313|EMBL:CAZ89669.1}; TaxID=426114 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas arsenitoxydans (strain DSM 22701 / CIP 110005 / 3As).;"
SCN18_26_2_15_R5_F_scaffold_1460_14
SCN_Comamonas_36x, SCN_Comamonas_36x, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12453..13262)
DNA (810bp) protein (270aa)
Integrase family protein n=1 Tax=Thiomonas intermedia (strain K12) RepID=D5X585_THIK1
integrase family protein
Integrase family protein {ECO:0000313|EMBL:ADG29909.1}; TaxID=75379 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas intermedia (strain K12) (Thiobacillus intermedius).;"
SCN18_26_2_15_R5_F_scaffold_1460_15
SCN_Comamonas_36x, SCN_Comamonas_36x, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13442..13633
DNA (192bp) protein (64aa)
Transposase of ISCARN44, IS630 family n=1 Tax=mine drainage metagenome RepID=E6PUC2_9ZZZZ
Transposase of ISCARN44, IS630 family {ECO:0000313|EMBL:CBH98529.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
isxo7 transposase
Displaying 15 items

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