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SCN18_30_10_14_R1_B_scaffold_7687

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Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_30_10_14_R1_B_scaffold_7687_1
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1..564)
DNA (564bp) protein (188aa)
Rod shape-determining protein MreB n=1 Tax=Sphingobium sp. SYK-6 RepID=G2ISN0_9SPHN
mreB; rod shape-determining protein MreB
Rod shape-determining protein MreB {ECO:0000313|EMBL:BAK66390.1}; TaxID=627192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. SYK-6.;"
SCN18_30_10_14_R1_B_scaffold_7687_2
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

738..2489
DNA (1752bp) protein (584aa)
DNA mismatch repair protein MutL n=1 Tax=Sphingobium sp. SYK-6 RepID=G2ISN1_9SPHN
mutL; DNA mismatch repair protein MutL
DNA mismatch repair protein MutL {ECO:0000256|HAMAP-Rule:MF_00149, ECO:0000256|SAAS:SAAS00058680}; TaxID=627192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. SYK-6.;"
SCN18_30_10_14_R1_B_scaffold_7687_3
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2622..3311)
DNA (690bp) protein (230aa)
Tax=RIFCSPLOWO2_02_FULL_Gammaproteobacteria_57_10_curated
SCN18_30_10_14_R1_B_scaffold_7687_4
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3476..4186
DNA (711bp) protein (237aa)
Peptidase M28 n=1 Tax=Sphingobium ummariense RL-3 RepID=T0J934_9SPHN
Peptidase M28 {ECO:0000313|EMBL:EQB33347.1}; TaxID=1346791 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium ummariense RL-3.;"
peptidase M28
SCN18_30_10_14_R1_B_scaffold_7687_5
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4232..4699)
DNA (468bp) protein (156aa)
MaoC-like dehydratase n=1 Tax=Sphingobium sp. SYK-6 RepID=G2ISN2_9SPHN
MaoC-like dehydratase
MaoC-like dehydratase {ECO:0000313|EMBL:BAK66392.1}; TaxID=627192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. SYK-6.;"
SCN18_30_10_14_R1_B_scaffold_7687_6
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4819..6369)
DNA (1551bp) protein (517aa)
Putative phosphodiesterase/alkaline phosphatase {ECO:0000313|EMBL:BAK66393.1}; EC=3.1.3.1 {ECO:0000313|EMBL:BAK66393.1};; EC=3.1.4.- {ECO:0000313|EMBL:BAK66393.1};; TaxID=627192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. SYK-6.;"
Putative phosphodiesterase/alkaline phosphatase n=1 Tax=Sphingobium sp. SYK-6 RepID=G2ISN3_9SPHN
putative phosphodiesterase/alkaline phosphatase
SCN18_30_10_14_R1_B_scaffold_7687_7
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6547..7308)
DNA (762bp) protein (254aa)
Ribosome-binding ATPase YchF n=1 Tax=Sphingobium sp. SYK-6 RepID=G2ISN5_9SPHN
putative GTPase
Ribosome-binding ATPase YchF {ECO:0000256|HAMAP-Rule:MF_00944}; TaxID=627192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. SYK-6.;"
SCN18_30_10_14_R1_B_scaffold_7687_8
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7597..9486)
DNA (1890bp) protein (630aa)
Putative uncharacterized protein n=1 Tax=Sphingobium sp. SYK-6 RepID=G2ISN7_9SPHN
hypothetical protein
Putative uncharacterized protein {ECO:0000313|EMBL:BAK66397.1}; TaxID=627192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. SYK-6.;"
SCN18_30_10_14_R1_B_scaffold_7687_9
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9696..10280
DNA (585bp) protein (195aa)
Rare lipoprotein A n=1 Tax=Sphingobium sp. SYK-6 RepID=G2ISN8_9SPHN
rare lipoprotein A
Rare lipoprotein A {ECO:0000313|EMBL:BAK66398.1}; TaxID=627192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. SYK-6.;"
SCN18_30_10_14_R1_B_scaffold_7687_10
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10345..10884)
DNA (540bp) protein (180aa)
Peptidyl-tRNA hydrolase {ECO:0000256|HAMAP-Rule:MF_00083, ECO:0000256|RuleBase:RU000673}; Short=PTH {ECO:0000256|HAMAP-Rule:MF_00083};; EC=3.1.1.29 {ECO:0000256|HAMAP-Rule:MF_00083, ECO:0000256|RuleBase:RU000673};; TaxID=627192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. SYK-6.;"
Peptidyl-tRNA hydrolase n=1 Tax=Sphingobium sp. SYK-6 RepID=G2ISN9_9SPHN
pth; peptidyl-tRNA hydrolase
SCN18_30_10_14_R1_B_scaffold_7687_11
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(10975..11592)
DNA (618bp) protein (206aa)
50S ribosomal protein L25 n=1 Tax=Sphingobium sp. SYK-6 RepID=G2ISP0_9SPHN
rplY; 50S ribosomal protein L25
50S ribosomal protein L25 {ECO:0000256|HAMAP-Rule:MF_01334}; General stress protein CTC {ECO:0000256|HAMAP-Rule:MF_01334}; TaxID=627192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. SYK-6.;"
Displaying 11 items

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