name | lists | location/seqs | annotations | notes |
---|---|---|---|---|
SCN18_30_10_14_R1_B_scaffold_2266_1
SCNPILOT_CONT_500_BF_Actinomycetales_73_43, Cellulomonas, Micrococcales, Actinobacteria, Actinobacteria, Bacteria
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Not on your lists |
3..665
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Pseudouridine synthase {ECO:0000256|RuleBase:RU362028}; EC=5.4.99.- {ECO:0000256|RuleBase:RU362028};; TaxID=1349820 species="Bacteria; Actinobacteria; Micrococcales; Micrococcaceae; Arthrobacter.;" source="Arthrobacter sp. AK-YN10.;"
Pseudouridine synthase n=1 Tax=Arthrobacter sp. AK-YN10 RepID=U1ZVJ5_9MICC
RNA RluA family pseudouridine synthase
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SCN18_30_10_14_R1_B_scaffold_2266_2
SCNPILOT_EXPT_1000_BF_Sphingomonas_65_55, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
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Not on your lists |
comp(557..1792)
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Cysteine desulfurase {ECO:0000313|EMBL:BAK66013.1}; EC=2.8.1.7 {ECO:0000313|EMBL:BAK66013.1};; TaxID=627192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. SYK-6.;"
Cysteine desulfurase n=1 Tax=Sphingobium sp. SYK-6 RepID=G2IQZ1_9SPHN
iscS; cysteine desulfurase
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SCN18_30_10_14_R1_B_scaffold_2266_3
SCNPILOT_EXPT_1000_BF_Sphingomonas_65_55, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(1789..2841)
|
Cysteine desulfurase {ECO:0000313|EMBL:BAK66012.1}; EC=2.8.1.7 {ECO:0000313|EMBL:BAK66012.1};; TaxID=627192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. SYK-6.;"
Cysteine desulfurase n=1 Tax=Sphingobium sp. SYK-6 RepID=G2IQZ0_9SPHN
iscS; cysteine desulfurase
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SCN18_30_10_14_R1_B_scaffold_2266_4
SCNPILOT_EXPT_1000_BF_Sphingomonas_65_55, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
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Not on your lists |
2984..3640
|
Putative uncharacterized protein n=1 Tax=Sphingobium sp. SYK-6 RepID=G2IQY9_9SPHN
hypothetical protein
Putative uncharacterized protein {ECO:0000313|EMBL:BAK66011.1}; TaxID=627192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. SYK-6.;"
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SCN18_30_10_14_R1_B_scaffold_2266_5
SCNPILOT_EXPT_1000_BF_Sphingomonas_65_55, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(3766..4665)
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Uncharacterized protein n=1 Tax=Novosphingobium tardaugens NBRC 16725 RepID=U2ZXH1_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:GAD50089.1}; TaxID=1219035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium tardaugens NBRC 16725.;"
permease, DMT superfamily
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SCN18_30_10_14_R1_B_scaffold_2266_6
SCNPILOT_EXPT_1000_BF_Sphingomonas_65_55, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(4658..6445)
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Putative ABC transporter ATP-binding protein n=1 Tax=Sphingobium sp. SYK-6 RepID=G2IQY7_9SPHN
putative ABC transporter ATP-binding protein
Putative ABC transporter ATP-binding protein {ECO:0000313|EMBL:BAK66009.1}; TaxID=627192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. SYK-6.;"
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SCN18_30_10_14_R1_B_scaffold_2266_7
SCNPILOT_EXPT_1000_BF_Sphingomonas_65_55, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
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Not on your lists |
6573..7334
|
Putative uncharacterized protein n=1 Tax=Sphingobium sp. SYK-6 RepID=G2IQY6_9SPHN
hypothetical protein
Putative uncharacterized protein {ECO:0000313|EMBL:BAK66008.1}; TaxID=627192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. SYK-6.;"
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SCN18_30_10_14_R1_B_scaffold_2266_8
SCNPILOT_EXPT_1000_BF_Sphingomonas_65_55, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
7396..7710
|
Putative uncharacterized protein n=1 Tax=Sphingobium sp. SYK-6 RepID=G2IQY5_9SPHN
hypothetical protein
Putative uncharacterized protein {ECO:0000313|EMBL:BAK66007.1}; TaxID=627192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. SYK-6.;"
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SCN18_30_10_14_R1_B_scaffold_2266_9
SCNPILOT_EXPT_1000_BF_Sphingomonas_65_55, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
7762..8427
|
OmpR family two-component system response regulator n=1 Tax=Sphingobium sp. SYK-6 RepID=G2IQY4_9SPHN
OmpR family two-component system response regulator
OmpR family two-component system response regulator {ECO:0000313|EMBL:BAK66006.1}; TaxID=627192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. SYK-6.;"
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SCN18_30_10_14_R1_B_scaffold_2266_10
SCNPILOT_EXPT_1000_BF_Sphingomonas_65_55, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
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Not on your lists |
8411..9793
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Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=627192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. SYK-6.;"
Two-component system sensor histidine kinase n=1 Tax=Sphingobium sp. SYK-6 RepID=G2IQY3_9SPHN
two-component system sensor histidine kinase
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SCN18_30_10_14_R1_B_scaffold_2266_11
SCNPILOT_EXPT_1000_BF_Sphingomonas_65_55, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(9807..10124)
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Putative uncharacterized protein n=1 Tax=Sphingobium chlorophenolicum L-1 RepID=F6EZH9_SPHCR
Uncharacterized protein {ECO:0000313|EMBL:AJR25997.1}; TaxID=484429 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. YBL2.;"
hypothetical protein
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SCN18_30_10_14_R1_B_scaffold_2266_12
SCNPILOT_EXPT_1000_BF_Sphingomonas_65_55, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(10286..11887)
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Phosphoenolpyruvate carboxykinase [ATP] {ECO:0000256|HAMAP-Rule:MF_00453}; Short=PCK {ECO:0000256|HAMAP-Rule:MF_00453};; Short=PEP carboxykinase {ECO:0000256|HAMAP-Rule:MF_00453};; Short=PEPCK {ECO:0000256|HAMAP-Rule:MF_00453};; EC=4.1.1.49 {ECO:0000256|HAMAP-Rule:MF_00453};; TaxID=627192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. SYK-6.;"
Phosphoenolpyruvate carboxykinase [ATP] n=1 Tax=Sphingobium sp. SYK-6 RepID=G2IRT9_9SPHN
pckA; phosphoenolpyruvate carboxykinase
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SCN18_30_10_14_R1_B_scaffold_2266_13
SCNPILOT_EXPT_1000_BF_Sphingomonas_65_55, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
12149..12856
|
OmpR family two-component system response regulator n=1 Tax=Sphingobium sp. SYK-6 RepID=G2IRT8_9SPHN
OmpR family two-component system response regulator
OmpR family two-component system response regulator {ECO:0000313|EMBL:BAK66154.1}; TaxID=627192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. SYK-6.;"
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SCN18_30_10_14_R1_B_scaffold_2266_14
unknown
|
Not on your lists |
comp(12843..13325)
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This feature has no annotations |
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SCN18_30_10_14_R1_B_scaffold_2266_15
SCNPILOT_EXPT_1000_BF_Sphingomonas_65_55, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
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Not on your lists |
13633..14307
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Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=627192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. SYK-6.;"
Two-component system sensor histidine kinase n=1 Tax=Sphingobium sp. SYK-6 RepID=G2IRT7_9SPHN
two-component system sensor histidine kinase
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SCN18_30_10_14_R1_B_scaffold_2266_16
SCNPILOT_EXPT_1000_BF_Sphingomonas_65_55, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
14311..14754
|
HPr kinase/phosphorylase n=1 Tax=Sphingobium sp. SYK-6 RepID=G2IRT6_9SPHN
HPr kinase/phosphorylase
HPr kinase/phosphorylase {ECO:0000313|EMBL:BAK66152.1}; TaxID=627192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. SYK-6.;"
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SCN18_30_10_14_R1_B_scaffold_2266_17
SCNPILOT_EXPT_1000_BF_Sphingomonas_65_55, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
14751..15707
|
UPF0042 nucleotide-binding protein SLG_14760 n=1 Tax=Sphingobium sp. SYK-6 RepID=G2IRT5_9SPHN
putative P-loop-containing ATPase
Nucleotide-binding protein SLG_14760 {ECO:0000256|HAMAP-Rule:MF_00636}; TaxID=627192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. SYK-6.;"
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SCN18_30_10_14_R1_B_scaffold_2266_18
SCNPILOT_EXPT_1000_BF_Sphingomonas_65_55, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
15713..16117
|
PTS system IIA component {ECO:0000313|EMBL:BAK66150.1}; EC=2.7.1.69 {ECO:0000313|EMBL:BAK66150.1};; TaxID=627192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. SYK-6.;"
PTS system IIA component n=1 Tax=Sphingobium sp. SYK-6 RepID=G2IRT4_9SPHN
PTS system transporter subunit IIA
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SCN18_30_10_14_R1_B_scaffold_2266_19
SCNPILOT_EXPT_1000_BF_Sphingomonas_65_55, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
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Not on your lists |
16114..16404
|
Phosphocarrier protein HPr n=1 Tax=Sphingobium sp. SYK-6 RepID=G2IRT3_9SPHN
ptsH; phosphocarrier protein HPr
Phosphocarrier protein HPr {ECO:0000313|EMBL:BAK66149.1}; TaxID=627192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. SYK-6.;"
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SCN18_30_10_14_R1_B_scaffold_2266_20
SCNPILOT_EXPT_1000_BF_Sphingomonas_65_55, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
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Not on your lists |
16490..17293
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RNA methyltransferase {ECO:0000313|EMBL:BAK66148.1}; EC=2.1.1.- {ECO:0000313|EMBL:BAK66148.1};; TaxID=627192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. SYK-6.;"
RNA methyltransferase n=1 Tax=Sphingobium sp. SYK-6 RepID=G2IRT2_9SPHN
RNA methyltransferase
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SCN18_30_10_14_R1_B_scaffold_2266_21
SCNPILOT_EXPT_1000_BF_Sphingomonas_65_55, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
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Not on your lists |
comp(17309..18439)
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Chemotaxis protein MotB n=1 Tax=Sphingobium sp. SYK-6 RepID=G2IQX4_9SPHN
motB; chemotaxis protein MotB
Chemotaxis protein MotB {ECO:0000313|EMBL:BAK65996.1}; TaxID=627192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. SYK-6.;"
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SCN18_30_10_14_R1_B_scaffold_2266_22
SCNPILOT_EXPT_1000_BF_Sphingomonas_65_55, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
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Not on your lists |
comp(18467..19330)
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Chemotaxis protein MotA n=1 Tax=Sphingobium sp. SYK-6 RepID=G2IQX3_9SPHN
motA; chemotaxis protein MotA
Chemotaxis protein MotA {ECO:0000313|EMBL:BAK65995.1}; TaxID=627192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. SYK-6.;"
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SCN18_30_10_14_R1_B_scaffold_2266_23
SCNPILOT_EXPT_1000_BF_Sphingomonas_65_55, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
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Not on your lists |
comp(19542..20378)
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Flagellar hook-associated protein 3 n=1 Tax=Sphingobium sp. SYK-6 RepID=G2IQX2_9SPHN
flgL; flagellar hook-associated protein 3
Flagellar hook-associated protein 3 {ECO:0000313|EMBL:BAK65994.1}; TaxID=627192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. SYK-6.;"
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SCN18_30_10_14_R1_B_scaffold_2266_24
unknown
|
Not on your lists |
comp(20405..20494)
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flgK; flagellar hook-associated protein 1 FlgK
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