name | lists | location/seqs | annotations | notes |
---|---|---|---|---|
SCN18_30_10_14_R1_B_scaffold_2559_1
SCNPILOT_EXPT_1000_BF_Sphingomonas_65_55, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
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Not on your lists |
comp(1..1422)
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Putative two-component system hybrid sensor and regulator n=1 Tax=Sphingobium sp. SYK-6 RepID=G2IS34_9SPHN
putative two-component system hybrid sensor and regulator
Putative two-component system hybrid sensor and regulator {ECO:0000313|EMBL:BAK66194.1}; TaxID=627192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. SYK-6.;"
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SCN18_30_10_14_R1_B_scaffold_2559_2
SCNPILOT_EXPT_1000_BF_Sphingomonas_65_55, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
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Not on your lists |
comp(1419..2021)
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Putative uncharacterized protein n=1 Tax=Sphingobium sp. SYK-6 RepID=G2IRX7_9SPHN
hypothetical protein
Putative uncharacterized protein {ECO:0000313|EMBL:BAK66193.1}; TaxID=627192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. SYK-6.;"
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SCN18_30_10_14_R1_B_scaffold_2559_3
SCNPILOT_EXPT_1000_BF_Sphingomonas_65_55, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
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Not on your lists |
comp(2021..2503)
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SsrA-binding protein n=1 Tax=Sphingobium sp. SYK-6 RepID=G2IRX6_9SPHN
smpB; SsrA-binding protein
SsrA-binding protein {ECO:0000256|HAMAP-Rule:MF_00023, ECO:0000256|SAAS:SAAS00023472}; TaxID=627192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. SYK-6.;"
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SCN18_30_10_14_R1_B_scaffold_2559_4
SCNPILOT_EXPT_1000_BF_Sphingomonas_65_55, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
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Not on your lists |
comp(2554..3432)
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4-hydroxy-tetrahydrodipicolinate synthase {ECO:0000256|HAMAP-Rule:MF_00418, ECO:0000256|SAAS:SAAS00086421}; Short=HTPA synthase {ECO:0000256|HAMAP-Rule:MF_00418};; EC=4.3.3.7 {ECO:0000256|HAMAP-Rule:MF_00418, ECO:0000256|SAAS:SAAS00086421};; TaxID=627192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. SYK-6.;"
4-hydroxy-tetrahydrodipicolinate synthase n=1 Tax=Sphingobium sp. SYK-6 RepID=G2IRX5_9SPHN
dapA; dihydrodipicolinate synthase
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SCN18_30_10_14_R1_B_scaffold_2559_5
SCNPILOT_EXPT_1000_BF_Sphingomonas_65_55, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
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Not on your lists |
3526..5553
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Putative lytic transglycosylase {ECO:0000313|EMBL:BAK66190.1}; EC=3.2.1.- {ECO:0000313|EMBL:BAK66190.1};; TaxID=627192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. SYK-6.;"
Putative lytic transglycosylase n=1 Tax=Sphingobium sp. SYK-6 RepID=G2IRX4_9SPHN
putative lytic transglycosylase
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SCN18_30_10_14_R1_B_scaffold_2559_6
Leptospira fainei, Leptospira, Spirochaetia, Spirochaetes, Bacteria
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Not on your lists |
comp(5567..6055)
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hypothetical protein n=1 Tax=Pseudomonas sp. 45MFCol3.1 RepID=UPI00037449D7
Uncharacterized protein {ECO:0000313|EMBL:EPG72602.1}; TaxID=1193011 species="Bacteria; Spirochaetes; Leptospirales; Leptospiraceae; Leptospira.;" source="Leptospira fainei serovar Hurstbridge str. BUT 6.;"
hypothetical protein
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SCN18_30_10_14_R1_B_scaffold_2559_7
unknown
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Not on your lists |
6184..6369
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This feature has no annotations |
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SCN18_30_10_14_R1_B_scaffold_2559_8
SCNPILOT_EXPT_1000_BF_Sphingomonas_65_55, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
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Not on your lists |
6371..6862
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Transcription elongation factor GreB n=1 Tax=Sphingobium sp. SYK-6 RepID=G2IRX2_9SPHN
greB; transcription elongation factor GreB
Transcription elongation factor GreB {ECO:0000256|HAMAP-Rule:MF_00930}; Transcript cleavage factor GreB {ECO:0000256|HAMAP-Rule:MF_00930}; TaxID=627192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. SYK-6.;"
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SCN18_30_10_14_R1_B_scaffold_2559_9
Sphingobium sp. SYK-6, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
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Not on your lists |
6829..7491
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Putative uncharacterized protein n=1 Tax=Sphingobium sp. SYK-6 RepID=G2IRX1_9SPHN
hypothetical protein
Putative uncharacterized protein {ECO:0000313|EMBL:BAK66187.1}; TaxID=627192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. SYK-6.;"
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SCN18_30_10_14_R1_B_scaffold_2559_10
SCNPILOT_EXPT_1000_BF_Sphingomonas_65_55, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
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Not on your lists |
comp(7585..8373)
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Putative polyphosphate kinase 2 {ECO:0000313|EMBL:BAK66185.1}; EC=2.7.4.1 {ECO:0000313|EMBL:BAK66185.1};; TaxID=627192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. SYK-6.;"
Putative polyphosphate kinase 2 n=1 Tax=Sphingobium sp. SYK-6 RepID=G2IRW9_9SPHN
ppk2; putative polyphosphate kinase 2
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SCN18_30_10_14_R1_B_scaffold_2559_11
SCNPILOT_EXPT_1000_BF_Sphingomonas_65_55, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
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Not on your lists |
8691..11255
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TonB-dependent receptor-like protein n=1 Tax=Sphingobium sp. SYK-6 RepID=G2IS41_9SPHN
TonB-dependent receptor-like protein
TonB-dependent receptor-like protein {ECO:0000313|EMBL:BAK66201.1}; TaxID=627192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. SYK-6.;"
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SCN18_30_10_14_R1_B_scaffold_2559_12
SCNPILOT_EXPT_1000_BF_Sphingomonas_65_55, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
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Not on your lists |
11498..12376
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Putative uncharacterized protein n=1 Tax=Sphingobium sp. SYK-6 RepID=G2IKR7_9SPHN
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Gammaproteobacteria_52_10_curated
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SCN18_30_10_14_R1_B_scaffold_2559_13
SCNPILOT_EXPT_1000_BF_Sphingomonas_65_55, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
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Not on your lists |
comp(12408..13400)
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Putative Na+-dependent transporter n=1 Tax=Caulobacter sp. AP07 RepID=J3A6B2_9CAUL
bile acid:sodium symporter
Putative Na+-dependent transporter {ECO:0000313|EMBL:EJL27171.1}; Flags: Precursor;; TaxID=1144304 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Caulobacter.;" source="Caulobacter sp. AP07.;"
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SCN18_30_10_14_R1_B_scaffold_2559_14
SCNPILOT_EXPT_1000_BF_Sphingomonas_65_55, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
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Not on your lists |
comp(13528..14292)
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Putative uncharacterized protein n=1 Tax=Sphingobium sp. SYK-6 RepID=G2IJ66_9SPHN
hypothetical protein
Putative uncharacterized protein {ECO:0000313|EMBL:BAK67236.1}; TaxID=627192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. SYK-6.;"
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SCN18_30_10_14_R1_B_scaffold_2559_15
SCNPILOT_EXPT_1000_BF_Sphingomonas_65_55, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
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Not on your lists |
comp(14483..15955)
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NAD-dependent aldehyde dehydrogenase {ECO:0000313|EMBL:BAK67507.1}; EC=1.2.1.- {ECO:0000313|EMBL:BAK67507.1};; TaxID=627192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. SYK-6.;"
NAD-dependent aldehyde dehydrogenase n=1 Tax=Sphingobium sp. SYK-6 RepID=G2IKV5_9SPHN
NAD-dependent aldehyde dehydrogenase
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SCN18_30_10_14_R1_B_scaffold_2559_16
SCNPILOT_CONT_750_BF_Rhodospirillales_70_18, SCNPILOT_CONT_750_BF_Rhodospirillales_70_18, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria
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Not on your lists |
comp(16232..16888)
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Glutathione S-transferase {ECO:0000313|EMBL:BAK67508.1}; EC=2.5.1.18 {ECO:0000313|EMBL:BAK67508.1};; TaxID=627192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. SYK-6.;"
Glutathione S-transferase n=1 Tax=Sphingobium sp. SYK-6 RepID=G2IKV6_9SPHN
gst; glutathione S-transferase
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SCN18_30_10_14_R1_B_scaffold_2559_17
SCNPILOT_CONT_750_BF_Rhodospirillales_70_18, SCNPILOT_CONT_750_BF_Rhodospirillales_70_18, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria
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Not on your lists |
16990..17553
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Transcriptional regulatory protein n=1 Tax=Bradyrhizobium diazoefficiens (strain JCM 10833 / IAM 13628 / NBRC 14792 / USDA 110) RepID=Q89C14_BRADU
transcriptional regulator
Transcriptional regulatory protein {ECO:0000313|EMBL:BAC53249.1}; TaxID=224911 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium diazoefficiens (strain JCM 10833 / IAM 13628 / NBRC; 14792 / USDA 110).;"
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SCN18_30_10_14_R1_B_scaffold_2559_18
SCNPILOT_EXPT_1000_BF_Sphingomonas_65_55, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
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Not on your lists |
comp(17711..18595)
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Putative oxidoreductase n=1 Tax=Sphingobium sp. SYK-6 RepID=G2IKV7_9SPHN
putative oxidoreductase
Putative oxidoreductase {ECO:0000313|EMBL:BAK67509.1}; TaxID=627192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. SYK-6.;"
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SCN18_30_10_14_R1_B_scaffold_2559_19
SCNPILOT_EXPT_1000_BF_Sphingomonas_65_55, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
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Not on your lists |
comp(18708..20036)
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Putative uncharacterized protein n=1 Tax=Sphingobium sp. SYK-6 RepID=G2IPP7_9SPHN
hypothetical protein
Putative uncharacterized protein {ECO:0000313|EMBL:BAK65725.1}; TaxID=627192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. SYK-6.;"
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SCN18_30_10_14_R1_B_scaffold_2559_20
SCNPILOT_EXPT_1000_BF_Afipia_62_8, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
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Not on your lists |
20200..20673
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Cys-tRNA(Pro)/Cys-tRNA(Cys) deacylase {ECO:0000256|PIRNR:PIRNR006181}; EC=4.2.-.- {ECO:0000256|PIRNR:PIRNR006181};; TaxID=78245 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Xanthobacter.;" source="Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2).;"
Cys-tRNA(Pro)/Cys-tRNA(Cys) deacylase n=1 Tax=Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2) RepID=A7II20_XANP2
ybaK/ebsC protein
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SCN18_30_10_14_R1_B_scaffold_2559_21
SCNPILOT_EXPT_1000_BF_Sphingomonas_65_55, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
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Not on your lists |
comp(20695..20844)
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Putative uncharacterized protein n=1 Tax=Sphingobium sp. SYK-6 RepID=G2IQA0_9SPHN
hypothetical protein
Putative uncharacterized protein {ECO:0000313|EMBL:BAK68274.1}; TaxID=627192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. SYK-6.;"
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SCN18_30_10_14_R1_B_scaffold_2559_22
SCNPILOT_SOLID_1_TRIM150_Actinobacteria_71_9, SCNPILOT_SOLID_1_TRIM150_Actinobacteria_71_9, SCNPILOT_SOLID_1_TRIM150_Actinobacteria_71_9, Actinobacteria, Actinobacteria, Bacteria
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Not on your lists |
21044..21454
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Uncharacterized protein n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4R9E4_PELHB
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEQ53478.1}; TaxID=1082931 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Pelagibacterium.;" source="Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2).;"
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SCN18_30_10_14_R1_B_scaffold_2559_23
Streptomyces hygroscopicus, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria
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Not on your lists |
comp(21762..22109)
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TetR-family regulator n=2 Tax=Streptomyces hygroscopicus subsp. jinggangensis RepID=H2JZP1_STRHJ
TetR-family regulator
TetR-family regulator {ECO:0000313|EMBL:AEY86475.1}; TaxID=1133850 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces hygroscopicus subsp. jinggangensis (strain 5008).;"
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