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SCN18_30_10_14_R1_B_scaffold_2662

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Displaying 19 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_30_10_14_R1_B_scaffold_2662_1
SCNPILOT_EXPT_1000_BF_Altererythrobacter_66_12, SCNPILOT_EXPT_1000_BF_Altererythrobacter_66_12, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3..425)
DNA (423bp) protein (141aa)
Putative uncharacterized protein n=1 Tax=Sphingobium sp. SYK-6 RepID=G2INX7_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:AKH43930.1}; TaxID=1267766 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Altererythrobacter.;" source="Altererythrobacter atlanticus.;"
hypothetical protein
SCN18_30_10_14_R1_B_scaffold_2662_2
SCNPILOT_EXPT_1000_BF_Sphingomonas_65_55, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(497..1027)
DNA (531bp) protein (177aa)
MarR family transcriptional regulator n=1 Tax=Sphingobium sp. SYK-6 RepID=G2INY8_9SPHN
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AJP71370.1}; TaxID=1609977 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. WHSC-8.;"
SCN18_30_10_14_R1_B_scaffold_2662_3
SCNPILOT_EXPT_300_BF_Novosphingobium_63_58, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1241..2689
DNA (1449bp) protein (483aa)
Putative vanillin dehydrogenase n=1 Tax=Novosphingobium pentaromativorans US6-1 RepID=G6EGA9_9SPHN
aldehyde dehydrogenase
Putative vanillin dehydrogenase {ECO:0000313|EMBL:EHJ59798.1}; TaxID=1088721 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium pentaromativorans US6-1.;"
SCN18_30_10_14_R1_B_scaffold_2662_4
SCNPILOT_EXPT_300_BF_Novosphingobium_63_58, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2700..3755
DNA (1056bp) protein (352aa)
amidohydrolase n=1 Tax=Novosphingobium sp. B-7 RepID=UPI0003B519D0
amidohydrolase
Amidohydrolase 2 {ECO:0000313|EMBL:ABD25244.1}; TaxID=279238 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium aromaticivorans (strain DSM 12444 / F199).;"
SCN18_30_10_14_R1_B_scaffold_2662_5
SCNPILOT_CONT_1000_P_Pseudonocardia_72_23, SCNPILOT_CONT_1000_P_Pseudonocardia_72_23, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3968..5395)
DNA (1428bp) protein (476aa)
NAD-dependent aldehyde dehydrogenase n=1 Tax=Sphingobium sp. SYK-6 RepID=G2INX6_9SPHN
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Gammaproteobacteria_56_15_curated
SCN18_30_10_14_R1_B_scaffold_2662_6
SCNPILOT_EXPT_300_BF_Novosphingobium_63_58, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5778..8075
DNA (2298bp) protein (766aa)
Putative uncharacterized protein n=1 Tax=Novosphingobium pentaromativorans US6-1 RepID=G6EFN2_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:EHJ59903.1}; TaxID=1088721 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium pentaromativorans US6-1.;"
hypothetical protein
SCN18_30_10_14_R1_B_scaffold_2662_7
SCNPILOT_EXPT_1000_BF_Sphingomonas_65_55, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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8165..9604
DNA (1440bp) protein (480aa)
Major facilitator superfamily protein n=1 Tax=Sphingobium sp. SYK-6 RepID=G2IPI4_9SPHN
major facilitator superfamily protein
Major facilitator superfamily protein {ECO:0000313|EMBL:BAK68165.1}; TaxID=627192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. SYK-6.;"
SCN18_30_10_14_R1_B_scaffold_2662_8
SCNPILOT_CONT_1000_BF_Chloroflexi_54_27, SCNPILOT_CONT_1000_BF_Chloroflexi_54_27, SCNPILOT_CONT_1000_BF_Chloroflexi_54_27, SCNPILOT_CONT_1000_BF_Chloroflexi_54_27, SCNPILOT_CONT_1000_BF_Chloroflexi_54_27, Bacteria

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9669..10340
DNA (672bp) protein (224aa)
Transcriptional regulator, TetR family n=1 Tax=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) RepID=A7HU19_PARL1
TetR family transcriptional regulator
Transcriptional regulator, TetR family {ECO:0000313|EMBL:ABS63402.1}; TaxID=402881 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhodobiaceae; Parvibaculum.;" source="Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966).;"
SCN18_30_10_14_R1_B_scaffold_2662_9
SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10437..11924
DNA (1488bp) protein (496aa)
4-hydroxyphenylacetate 3-hydroxylase n=1 Tax=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) RepID=A7HU20_PARL1
4-hydroxyphenylacetate 3-hydroxylase
4-hydroxyphenylacetate 3-hydroxylase {ECO:0000313|EMBL:ABS63403.1}; TaxID=402881 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhodobiaceae; Parvibaculum.;" source="Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966).;"
SCN18_30_10_14_R1_B_scaffold_2662_10
SCNpilot_BF_INOC_Bordetella_67_10, SCNpilot_BF_INOC_Bordetella_67_10, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11931..12524
DNA (594bp) protein (198aa)
hypothetical protein n=1 Tax=Streptomyces sp. PsTaAH-124 RepID=UPI0003614025
FMN reductase {ECO:0000313|EMBL:EYT81895.1}; TaxID=1470557 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sp. Tu 6176.;"
NADPH-dependent FMN reductase
SCN18_30_10_14_R1_B_scaffold_2662_11
SCNPILOT_EXPT_1000_BF_Altererythrobacter_66_12, SCNPILOT_EXPT_1000_BF_Altererythrobacter_66_12, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12586..13980
DNA (1395bp) protein (465aa)
Lignostilbene-alpha,beta-dioxygenase isozyme I {ECO:0000313|EMBL:AKH43929.1}; EC=1.13.11.43 {ECO:0000313|EMBL:AKH43929.1};; TaxID=1267766 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Altererythrobacter.;" source="Altererythrobacter atlanticus.;"
Crocetin dialdehyde n=1 Tax=Agrobacterium vitis (strain S4 / ATCC BAA-846) RepID=B9K281_AGRVS
crocetin dialdehyde
SCN18_30_10_14_R1_B_scaffold_2662_12
SCN_Variovorax_21x, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14047..15327)
DNA (1281bp) protein (427aa)
2-phosphonopropionate transporter n=1 Tax=Sphingobium sp. SYK-6 RepID=G2ISL7_9SPHN
2-phosphonopropionate transporter
2-phosphonopropionate transporter {ECO:0000313|EMBL:BAK66377.1}; TaxID=627192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. SYK-6.;"
SCN18_30_10_14_R1_B_scaffold_2662_13
SCN_Variovorax_21x, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15445..16545)
DNA (1101bp) protein (367aa)
Putative alcohol dehydrogenase {ECO:0000313|EMBL:BAK66378.1}; EC=1.1.1.- {ECO:0000313|EMBL:BAK66378.1};; TaxID=627192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. SYK-6.;"
Putative alcohol dehydrogenase n=1 Tax=Sphingobium sp. SYK-6 RepID=G2ISL8_9SPHN
putative alcohol dehydrogenase
SCN18_30_10_14_R1_B_scaffold_2662_14
Castellaniella defragrans_SCNPILOT_SOLID2_TRIM150_Castellaniella_66_80, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16542..17375)
DNA (834bp) protein (278aa)
Phosphonoacetaldehyde hydrolase {ECO:0000256|HAMAP-Rule:MF_01375}; Short=Phosphonatase {ECO:0000256|HAMAP-Rule:MF_01375};; EC=3.11.1.1 {ECO:0000256|HAMAP-Rule:MF_01375};; Phosphonoacetaldehyde phosphonohydrolase {ECO:0000256|HAMAP-Rule:MF_01375}; TaxID=627192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. SYK-6.;"
Phosphonoacetaldehyde hydrolase n=1 Tax=Sphingobium sp. SYK-6 RepID=G2ISL9_9SPHN
phnX; phosphonoacetaldehyde hydrolase
SCN18_30_10_14_R1_B_scaffold_2662_15
SCN_Variovorax_21x, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17504..18373
DNA (870bp) protein (290aa)
LysR family transcriptional regulator n=1 Tax=Sphingobium sp. SYK-6 RepID=G2ISM0_9SPHN
LysR family transcriptional regulator
LysR family transcriptional regulator {ECO:0000313|EMBL:BAK66380.1}; TaxID=627192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. SYK-6.;"
SCN18_30_10_14_R1_B_scaffold_2662_16
CN-SCN_Phenylobacterium_14x, CN-SCN_Phenylobacterium_14x, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18588..21845
DNA (3258bp) protein (1086aa)
TonB-dependent receptor-like protein n=1 Tax=Sphingobium sp. SYK-6 RepID=G2ISM1_9SPHN
TonB-dependent receptor-like protein
TonB-dependent receptor-like protein {ECO:0000313|EMBL:BAK66381.1}; TaxID=627192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. SYK-6.;"
SCN18_30_10_14_R1_B_scaffold_2662_17
SCNPILOT_EXPT_300_BF_Novosphingobium_63_58, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21917..23218
DNA (1302bp) protein (434aa)
Nucleotide pyrophosphatase family protein n=1 Tax=Sphingobium sp. SYK-6 RepID=G2ISM2_9SPHN
nucleotide pyrophosphatase family protein
Nucleotide pyrophosphatase family protein {ECO:0000313|EMBL:BAK66382.1}; TaxID=627192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. SYK-6.;"
SCN18_30_10_14_R1_B_scaffold_2662_18
SCNPILOT_EXPT_300_BF_Sphingomonas_67_13, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23314..23883
DNA (570bp) protein (190aa)
RNA polymerase ECF-type sigma factor n=2 Tax=Caulobacter crescentus (strain ATCC 19089 / CB15) RepID=B8H3N3_CAUCN
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AJP70776.1}; TaxID=1609977 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. WHSC-8.;"
SCN18_30_10_14_R1_B_scaffold_2662_19
SCNPILOT_EXPT_300_BF_Sphingomonas_67_13, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24005..24355
DNA (351bp) protein (117aa)
Fe2+-dicitrate sensor, membrane component n=1 Tax=Caulobacter sp. AP07 RepID=J3AV74_9CAUL
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AJP70777.1}; TaxID=1609977 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. WHSC-8.;"
Displaying 19 items

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