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SCN18_30_10_14_R1_B_scaffold_5077

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Displaying 8 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_30_10_14_R1_B_scaffold_5077_1
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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1..84
DNA (84bp) protein (28aa)
SCN18_30_10_14_R1_B_scaffold_5077_2
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(202..552)
DNA (351bp) protein (117aa)
competence protein TfoX n=1 Tax=Sphingomonas sp. PAMC 26605 RepID=UPI00026CCAB7
Uncharacterized protein {ECO:0000313|EMBL:AHE57379.1}; TaxID=1123269 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sanxanigenens DSM 19645 = NX02.;"
TfoX domain-containing protein
SCN18_30_10_14_R1_B_scaffold_5077_3
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(542..1063)
DNA (522bp) protein (174aa)
GCN5-related N-acetyltransferase n=1 Tax=Sphingobium chlorophenolicum L-1 RepID=F6EWT7_SPHCR
N-acetyltransferase GCN5
GCN5-related N-acetyltransferase {ECO:0000313|EMBL:AEG49875.1}; TaxID=690566 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium chlorophenolicum L-1.;"
SCN18_30_10_14_R1_B_scaffold_5077_4
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1063..1965)
DNA (903bp) protein (301aa)
Hypothetical membrane protein n=1 Tax=Sphingobium sp. SYK-6 RepID=G2IJK1_9SPHN
hypothetical protein
Hypothetical membrane protein {ECO:0000313|EMBL:BAK64871.1}; TaxID=627192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. SYK-6.;"
SCN18_30_10_14_R1_B_scaffold_5077_5
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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2167..3348
DNA (1182bp) protein (394aa)
Uncharacterized protein n=1 Tax=Sphingobium baderi LL03 RepID=T0HSG9_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:EQB00499.1}; TaxID=1114964 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium baderi LL03.;"
NADH:flavin oxidoreductase
SCN18_30_10_14_R1_B_scaffold_5077_6
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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3448..3633
DNA (186bp) protein (62aa)
UPF0391 membrane protein L288_07915 n=1 Tax=Sphingobium quisquiliarum P25 RepID=T0H851_9SPHN
UPF0391 membrane protein BV96_01629 {ECO:0000256|HAMAP-Rule:MF_01361}; TaxID=13689 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas paucimobilis (Pseudomonas paucimobilis).;"
hypothetical protein
SCN18_30_10_14_R1_B_scaffold_5077_7
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3644..5155)
DNA (1512bp) protein (504aa)
RNA polymerase sigma-54 factor n=1 Tax=Sphingobium sp. SYK-6 RepID=G2IRA5_9SPHN
rpoN; RNA polymerase sigma-54 factor
RNA polymerase sigma-54 factor {ECO:0000256|PIRNR:PIRNR000774}; TaxID=627192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. SYK-6.;"
SCN18_30_10_14_R1_B_scaffold_5077_8
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(5185..5664)
DNA (480bp) protein (160aa)
Putative ABC transporter ATP-binding protein n=1 Tax=Sphingobium sp. SYK-6 RepID=G2IRA4_9SPHN
putative ABC transporter ATP-binding protein
Putative ABC transporter ATP-binding protein {ECO:0000313|EMBL:BAK68470.1}; TaxID=627192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. SYK-6.;"
Displaying 8 items

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