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SCN18_30_10_14_R1_B_scaffold_5479

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Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_30_10_14_R1_B_scaffold_5479_1
CN-SCN_Rhodanobacter_45x, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(3..221)
DNA (219bp) protein (73aa)
Beta-lactamase domain-containing protein n=1 Tax=Novosphingobium sp. PP1Y RepID=F6IP46_9SPHN
mRNA 3'-end processing factor {ECO:0000313|EMBL:KHK93413.1}; TaxID=1348853 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium malaysiense.;"
beta-lactamase domain-containing protein
SCN18_30_10_14_R1_B_scaffold_5479_2
SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(281..547)
DNA (267bp) protein (89aa)
Putative uncharacterized protein n=1 Tax=Novosphingobium pentaromativorans US6-1 RepID=G6EF84_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:KHK93414.1}; TaxID=1348853 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium malaysiense.;"
hypothetical protein
SCN18_30_10_14_R1_B_scaffold_5479_3
SCNPILOT_CONT_300_BF_Rhizobiales_mobile_60_28, SCNPILOT_CONT_300_BF_Rhizobiales_mobile_60_28, SCNPILOT_CONT_300_BF_Rhizobiales_mobile_60_28, SCNPILOT_CONT_300_BF_Rhizobiales_mobile_60_28, SCNPILOT_CONT_300_BF_Rhizobiales_mobile_60_28, Mobile_element

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670..942
DNA (273bp) protein (91aa)
hypothetical protein n=1 Tax=Sphingobium xenophagum RepID=UPI000366918D
Copper-sensing transcriptional repressor CsoR family protein {ECO:0000313|EMBL:KHK93710.1}; TaxID=1348853 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium malaysiense.;"
hypothetical protein
SCN18_30_10_14_R1_B_scaffold_5479_4
Novosphingobium malaysiense, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(988..1371)
DNA (384bp) protein (128aa)
hypothetical protein n=1 Tax=Sphingobium xenophagum RepID=UPI00035E4A8F
Uncharacterized protein {ECO:0000313|EMBL:KHK93415.1}; TaxID=1348853 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium malaysiense.;"
hypothetical protein
SCN18_30_10_14_R1_B_scaffold_5479_5
SCNPILOT_EXPT_300_BF_Sphingomonadales_67_9, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1392..1853)
DNA (462bp) protein (154aa)
Uncharacterized protein n=1 Tax=Sphingobium lactosutens DS20 RepID=T0HHW3_9SPHN
Metal-binding protein {ECO:0000313|EMBL:KHK93416.1}; TaxID=1348853 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium malaysiense.;"
metal-binding protein
SCN18_30_10_14_R1_B_scaffold_5479_6
CN-SCN_Microbacterium_200x, Microbacterium, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

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comp(1856..2257)
DNA (402bp) protein (134aa)
Uncharacterized protein n=1 Tax=Sus scrofa RepID=F1SR20_PIG
Uncharacterized protein {ECO:0000313|EMBL:ETV90400.1}; Flags: Fragment;; TaxID=157072 species="Eukaryota; Stramenopiles; Oomycetes; Saprolegniales; Saprolegniaceae; Aphanomyces.;" source="Aphanomyces invadans.;"
hypothetical protein
SCN18_30_10_14_R1_B_scaffold_5479_7
CN-SCN_Sphingomonas_18x, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2264..2962)
DNA (699bp) protein (233aa)
Putative uncharacterized protein n=1 Tax=Novosphingobium pentaromativorans US6-1 RepID=G6EDZ5_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:EHJ60436.1}; TaxID=1088721 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium pentaromativorans US6-1.;"
hypothetical protein
SCN18_30_10_14_R1_B_scaffold_5479_8
Novosphingobium malaysiense, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3062..3346
DNA (285bp) protein (95aa)
Putative uncharacterized protein n=1 Tax=Novosphingobium pentaromativorans US6-1 RepID=G6EDZ4_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:KHK93418.1}; TaxID=1348853 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium malaysiense.;"
hypothetical protein
SCN18_30_10_14_R1_B_scaffold_5479_9
SCNPILOT_EXPT_1000_BF_Rhodanobacter_Plasmid_63_42, SCNPILOT_EXPT_1000_BF_Rhodanobacter_Plasmid_63_42, SCNPILOT_EXPT_1000_BF_Rhodanobacter_Plasmid_63_42, SCNPILOT_EXPT_1000_BF_Rhodanobacter_Plasmid_63_42, SCNPILOT_EXPT_1000_BF_Rhodanobacter_Plasmid_63_42, Plasmid-like

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3343..3783
DNA (441bp) protein (147aa)
Putative uncharacterized protein n=1 Tax=Novosphingobium pentaromativorans US6-1 RepID=G6EDZ3_9SPHN
Heavy metal resistance protein {ECO:0000313|EMBL:KHK93419.1}; TaxID=1348853 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium malaysiense.;"
heavy metal resistance protein
SCN18_30_10_14_R1_B_scaffold_5479_10
CN-SCN_Phenylobacterium_31x, RIFCSPHIGHO2_01_FULL_Phenylobacterium_69_31_curated, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3790..4350
DNA (561bp) protein (187aa)
Sigma-24 (FecI-like) n=1 Tax=Novosphingobium pentaromativorans US6-1 RepID=G6EDZ2_9SPHN
RNA polymerase {ECO:0000313|EMBL:KHK93420.1}; TaxID=1348853 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium malaysiense.;"
RNA polymerase
SCN18_30_10_14_R1_B_scaffold_5479_11
SCNPILOT_EXPT_1000_BF_Sphingomonas_65_55, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4347..5231
DNA (885bp) protein (295aa)
Copper-binding protein n=1 Tax=Novosphingobium pentaromativorans US6-1 RepID=G6EF89_9SPHN
Copper-binding protein {ECO:0000313|EMBL:KHK93421.1}; TaxID=1348853 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium malaysiense.;"
copper-binding protein
Displaying 11 items

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