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SCN18_30_10_14_R1_B_scaffold_9022

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Displaying 4 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_30_10_14_R1_B_scaffold_9022_1
SCNPILOT_EXPT_1000_BF_Sphingomonas_65_55, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3..875)
DNA (873bp) protein (291aa)
Putative DNA ligase {ECO:0000313|EMBL:BAK65104.1}; EC=6.5.1.1 {ECO:0000313|EMBL:BAK65104.1};; TaxID=627192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. SYK-6.;"
Putative DNA ligase n=1 Tax=Sphingobium sp. SYK-6 RepID=G2IL41_9SPHN
putative DNA ligase
SCN18_30_10_14_R1_B_scaffold_9022_2
SCNPILOT_EXPT_1000_BF_Sphingomonas_65_55, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(875..1366)
DNA (492bp) protein (164aa)
Putative MgtC/SapB family transporter n=1 Tax=Novosphingobium tardaugens NBRC 16725 RepID=U2YQF5_9SPHN
Putative MgtC/SapB family transporter {ECO:0000313|EMBL:GAD50897.1}; TaxID=1219035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium tardaugens NBRC 16725.;"
MgtC/SapB family transporter
SCN18_30_10_14_R1_B_scaffold_9022_3
SCNPILOT_EXPT_1000_BF_Sphingomonas_65_55, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1368..2192)
DNA (825bp) protein (275aa)
Probable DNA repair protein SLG_04310 n=1 Tax=Sphingobium sp. SYK-6 RepID=G2IL43_9SPHN
Ku protein
Non-homologous end joining protein Ku {ECO:0000256|HAMAP-Rule:MF_01875}; TaxID=627192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. SYK-6.;"
SCN18_30_10_14_R1_B_scaffold_9022_4
SCNPILOT_EXPT_1000_BF_Sphingomonas_65_55, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2256..3311)
DNA (1056bp) protein (352aa)
Fumarate hydratase class II {ECO:0000256|HAMAP-Rule:MF_00743}; Short=Fumarase C {ECO:0000256|HAMAP-Rule:MF_00743};; EC=4.2.1.2 {ECO:0000256|HAMAP-Rule:MF_00743};; TaxID=627192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. SYK-6.;"
Fumarate hydratase class II n=1 Tax=Sphingobium sp. SYK-6 RepID=G2INZ7_9SPHN
fumC; fumarate hydratase
Displaying 4 items

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