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SCN18_30_10_14_R1_B_scaffold_4260

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Displaying 8 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_30_10_14_R1_B_scaffold_4260_1
SCNPILOT_EXPT_1000_BF_Sphingomonas_65_55, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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3..641
DNA (639bp) protein (213aa)
Holliday junction ATP-dependent DNA helicase RuvB {ECO:0000256|HAMAP-Rule:MF_00016}; EC=3.6.4.12 {ECO:0000256|HAMAP-Rule:MF_00016};; TaxID=627192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. SYK-6.;"
Holliday junction ATP-dependent DNA helicase RuvB n=1 Tax=Sphingobium sp. SYK-6 RepID=G2IIM2_9SPHN
ruvB; Holliday junction ATP-dependent DNA helicase RuvB
SCN18_30_10_14_R1_B_scaffold_4260_2
SCNPILOT_EXPT_1000_BF_Sphingomonas_65_55, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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854..1312
DNA (459bp) protein (153aa)
Putative thioesterase n=1 Tax=Sphingobium sp. SYK-6 RepID=G2IJQ6_9SPHN
putative thioesterase
Putative thioesterase {ECO:0000313|EMBL:BAK64926.1}; TaxID=627192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. SYK-6.;"
SCN18_30_10_14_R1_B_scaffold_4260_3
SCNPILOT_EXPT_1000_BF_Sphingomonas_65_55, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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1333..2046
DNA (714bp) protein (238aa)
Biopolymer transport protein TolQ n=1 Tax=Sphingobium sp. SYK-6 RepID=G2IJQ5_9SPHN
biopolymer transport protein TolQ
Biopolymer transport protein TolQ {ECO:0000313|EMBL:BAK64925.1}; TaxID=627192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. SYK-6.;"
SCN18_30_10_14_R1_B_scaffold_4260_4
SCNPILOT_EXPT_1000_BF_Sphingomonas_65_55, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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2046..2528
DNA (483bp) protein (161aa)
Biopolymer transport protein TolR/ExbD n=1 Tax=Sphingobium sp. SYK-6 RepID=G2IJQ4_9SPHN
biopolymer transport protein TolR/ExbD
Biopolymer transport protein TolR/ExbD {ECO:0000313|EMBL:BAK64924.1}; TaxID=627192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. SYK-6.;"
SCN18_30_10_14_R1_B_scaffold_4260_5
SCNPILOT_EXPT_1000_BF_Sphingomonas_65_55, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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2539..3414
DNA (876bp) protein (292aa)
Putative TolA n=1 Tax=Sphingobium sp. SYK-6 RepID=G2IJQ3_9SPHN
putative TolA protein
Putative TolA {ECO:0000313|EMBL:BAK64923.1}; TaxID=627192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. SYK-6.;"
SCN18_30_10_14_R1_B_scaffold_4260_6
SCNPILOT_EXPT_1000_BF_Sphingomonas_65_55, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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3411..4745
DNA (1335bp) protein (445aa)
Protein TolB n=1 Tax=Sphingobium sp. SYK-6 RepID=G2IJQ2_9SPHN
tolB; TolB protein
Protein TolB {ECO:0000256|HAMAP-Rule:MF_00671}; Flags: Precursor;; TaxID=627192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. SYK-6.;"
SCN18_30_10_14_R1_B_scaffold_4260_7
SCNPILOT_EXPT_1000_BF_Sphingomonas_65_55, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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4847..5365
DNA (519bp) protein (173aa)
Peptidoglycan-associated lipoprotein n=1 Tax=Sphingobium sp. SYK-6 RepID=G2IJQ1_9SPHN
peptidoglycan-associated lipoprotein
Peptidoglycan-associated lipoprotein {ECO:0000313|EMBL:BAK64921.1}; TaxID=627192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. SYK-6.;"
SCN18_30_10_14_R1_B_scaffold_4260_8
SCNPILOT_EXPT_1000_BF_Sphingomonas_65_55, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(5770..6771)
DNA (1002bp) protein (334aa)
UDP-glucose 4-epimerase {ECO:0000313|EMBL:BAK65026.1}; EC=5.1.3.2 {ECO:0000313|EMBL:BAK65026.1};; TaxID=627192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. SYK-6.;"
UDP-glucose 4-epimerase n=1 Tax=Sphingobium sp. SYK-6 RepID=G2IKG3_9SPHN
galE; UDP-glucose 4-epimerase
Displaying 8 items

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