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SCN18_30_10_14_R1_B_scaffold_4463

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Displaying 7 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_30_10_14_R1_B_scaffold_4463_1
SCNPILOT_EXPT_1000_BF_Sphingomonas_65_55, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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2..970
DNA (969bp) protein (323aa)
Methylenetetrahydrofolate--tRNA-(uracil-5-)-methyltransferase TrmFO {ECO:0000256|HAMAP-Rule:MF_01037, ECO:0000256|SAAS:SAAS00089752}; EC=2.1.1.74 {ECO:0000256|HAMAP-Rule:MF_01037, ECO:0000256|SAAS:SAAS00089759};; Folate-dependent tRNA (uracil-5-)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01037}; Folate-dependent tRNA(M-5-U54)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01037}; TaxID=627192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. SYK-6.;"
Methylenetetrahydrofolate--tRNA-(uracil-5-)-methyltransferase TrmFO n=1 Tax=Sphingobium sp. SYK-6 RepID=G2IIE5_9SPHN
trmFO; methylenetetrahydrofolate--tRNA-(uracil-5-)-methyltransferase TrmFO
SCN18_30_10_14_R1_B_scaffold_4463_2
SCNPILOT_EXPT_1000_BF_Sphingomonas_65_55, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(999..1472)
DNA (474bp) protein (158aa)
Putative uncharacterized protein n=1 Tax=Sphingobium sp. SYK-6 RepID=G2IIE6_9SPHN
hypothetical protein
Putative uncharacterized protein {ECO:0000313|EMBL:BAK67069.1}; TaxID=627192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. SYK-6.;"
SCN18_30_10_14_R1_B_scaffold_4463_3
SCNPILOT_EXPT_1000_BF_Sphingomonas_65_55, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1492..2178)
DNA (687bp) protein (229aa)
Putative uncharacterized protein n=1 Tax=Sphingobium sp. SYK-6 RepID=G2IIE7_9SPHN
hypothetical protein
Putative uncharacterized protein {ECO:0000313|EMBL:BAK67070.1}; TaxID=627192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. SYK-6.;"
SCN18_30_10_14_R1_B_scaffold_4463_4
SCNPILOT_EXPT_1000_BF_Sphingomonas_65_55, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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2291..4273
DNA (1983bp) protein (661aa)
Uncharacterized protein n=1 Tax=Sphingobium lactosutens DS20 RepID=T0IWQ4_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:EQB16270.1}; TaxID=1331060 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium lactosutens DS20.;"
Flp pilus assembly protein TadG
SCN18_30_10_14_R1_B_scaffold_4463_5
SCNPILOT_EXPT_1000_BF_Sphingomonas_65_55, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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4283..4945
DNA (663bp) protein (221aa)
Tight adherence protein TadE n=1 Tax=Sphingobium sp. SYK-6 RepID=G2IIE9_9SPHN
tight adherence protein TadE
Tight adherence protein TadE {ECO:0000313|EMBL:BAK67072.1}; TaxID=627192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. SYK-6.;"
SCN18_30_10_14_R1_B_scaffold_4463_6
SCNPILOT_EXPT_1000_BF_Sphingomonas_65_55, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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4942..5595
DNA (654bp) protein (218aa)
Tight adherence protein TadE n=1 Tax=Sphingobium sp. SYK-6 RepID=G2IIF0_9SPHN
tight adherence protein TadE
Tight adherence protein TadE {ECO:0000313|EMBL:BAK67073.1}; TaxID=627192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. SYK-6.;"
SCN18_30_10_14_R1_B_scaffold_4463_7
SCNPILOT_EXPT_1000_BF_Sphingomonas_65_55, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(5742..6452)
DNA (711bp) protein (237aa)
Pyruvate dehydrogenase subunit beta {ECO:0000313|EMBL:EQA98723.1}; EC=1.2.4.1 {ECO:0000313|EMBL:EQA98723.1};; TaxID=428994 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. HDIP04.;"
Pyruvate dehydrogenase subunit beta n=2 Tax=Sphingobium RepID=I5BHG6_9SPHN
pdhB; pyruvate dehydrogenase E1 component subunit beta
Displaying 7 items

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