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SCN18_30_10_14_R1_B_scaffold_4738

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Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_30_10_14_R1_B_scaffold_4738_1
SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3..197)
DNA (195bp) protein (65aa)
Non-heme chloroperoxidase n=1 Tax=Streptomyces viridochromogenes DSM 40736 RepID=D9X2D4_STRVR
Non-heme chloroperoxidase (Chloride peroxidase) {ECO:0000313|EMBL:EHN78013.1}; TaxID=1120227 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces coelicoflavus ZG0656.;"
chloride peroxidase
SCN18_30_10_14_R1_B_scaffold_4738_2
SCNPILOT_EXPT_500_BF_STEP10_Armatimonadetes_55_34, SCNPILOT_EXPT_500_BF_STEP10_Armatimonadetes_55_34, SCNPILOT_EXPT_500_BF_STEP10_Armatimonadetes_55_34, SCNPILOT_EXPT_500_BF_STEP10_Armatimonadetes_55_34, SCNPILOT_EXPT_500_BF_STEP10_Armatimonadetes_55_34, Bacteria

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comp(276..1262)
DNA (987bp) protein (329aa)
Short-chain dehydrogenase/reductase SDR n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=Q2G4M0_NOVAD
short-chain dehydrogenase/reductase SDR
Short-chain dehydrogenase/reductase SDR {ECO:0000313|EMBL:ABD27203.1}; TaxID=279238 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium aromaticivorans (strain DSM 12444 / F199).;"
SCN18_30_10_14_R1_B_scaffold_4738_3
SCNPILOT_EXPT_300_BF_Novosphingobium_63_58, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1323..2354)
DNA (1032bp) protein (344aa)
Alcohol dehydrogenase superfamily, zinc-containing n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=Q2G4L9_NOVAD
alcohol dehydrogenase
Alcohol dehydrogenase superfamily, zinc-containing {ECO:0000313|EMBL:ABD27204.1}; TaxID=279238 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium aromaticivorans (strain DSM 12444 / F199).;"
SCN18_30_10_14_R1_B_scaffold_4738_4
SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, Alphaproteobacteria, Proteobacteria, Bacteria

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2456..3325
DNA (870bp) protein (290aa)
Transcriptional regulator, LysR family n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=Q2G4L8_NOVAD
LysR family transcriptional regulator
Transcriptional regulator, LysR family {ECO:0000313|EMBL:ABD27205.1}; TaxID=279238 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium aromaticivorans (strain DSM 12444 / F199).;"
SCN18_30_10_14_R1_B_scaffold_4738_5
SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3687..6053)
DNA (2367bp) protein (789aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1532558 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. YS-1r.;"
Two component sensor kinase n=1 Tax=Agrobacterium sp. ATCC 31749 RepID=F5JIH7_9RHIZ
Putative repetitive two-component sensor histidine kinase transcriptional regulatory protein
SCN18_30_10_14_R1_B_scaffold_4738_6
SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6486..7130
DNA (645bp) protein (215aa)
Chemotaxis protein CheY n=1 Tax=Mesorhizobium sp. LSHC420B00 RepID=V7FTY1_9RHIZ
Chemotaxis protein CheY {ECO:0000313|EMBL:ESX83254.1}; TaxID=1287292 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LSHC420B00.;"
two component LuxR family transcriptional regulator
SCN18_30_10_14_R1_B_scaffold_4738_7
SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7127..7516
DNA (390bp) protein (130aa)
regulator n=1 Tax=Rhizobium mongolense RepID=UPI0003B63BE8
Response regulator receiver protein {ECO:0000313|EMBL:CDX17541.1}; TaxID=1505932 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. ORS3324.;"
response regulator CheY-like domain-containing protein
SCN18_30_10_14_R1_B_scaffold_4738_8
SCNPILOT_CONT_750_P_Mesorhizobium_63_10, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7506..8234
DNA (729bp) protein (243aa)
Response regulator n=1 Tax=Sinorhizobium meliloti GR4 RepID=M4IJ38_RHIML
Response regulator
Response regulator {ECO:0000313|EMBL:EJC85295.1}; TaxID=754762 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium leguminosarum bv. trifolii WSM2297.;"
SCN18_30_10_14_R1_B_scaffold_4738_9
SCNPILOT_EXPT_300_BF_Sphingomonas_67_13, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8338..9222)
DNA (885bp) protein (295aa)
hypothetical protein n=1 Tax=Caulobacter sp. JGI 0001013-O16 RepID=UPI0003679D7E
Uncharacterized protein {ECO:0000313|EMBL:KDR35058.1}; TaxID=1071679 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia grimmiae.;"
hypothetical protein
SCN18_30_10_14_R1_B_scaffold_4738_10
SCNPILOT_CONT_750_BF_Acidobacteria_60_9_7, SCNPILOT_CONT_750_BF_Acidobacteria_60_9_7, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

comp(9289..9633)
DNA (345bp) protein (115aa)
Chloroperoxidase n=1 Tax=Mesorhizobium sp. LSHC420B00 RepID=V7FU82_9RHIZ
Chloroperoxidase {ECO:0000313|EMBL:ESX83257.1}; TaxID=1287292 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LSHC420B00.;"
non-heme chloroperoxidase
SCN18_30_10_14_R1_B_scaffold_4738_11
unknown

Not on your lists

9768..9830
DNA (63bp) protein (21aa)

This feature has no annotations

Displaying 11 items

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