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SCN18_30_10_14_R1_B_scaffold_4946

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Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_30_10_14_R1_B_scaffold_4946_1
SCNPILOT_EXPT_300_BF_Novosphingobium_63_58, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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1..309
DNA (309bp) protein (103aa)
Putative Aldehyde dehydrogenase (NAD(+)) {ECO:0000313|EMBL:CDX33717.1}; EC=1.2.1.3 {ECO:0000313|EMBL:CDX33717.1};; TaxID=1505933 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. ORS3359.;"
hypothetical protein n=1 Tax=Sphingobium xenophagum RepID=UPI00037F4299
aldehyde dehydrogenase protein
SCN18_30_10_14_R1_B_scaffold_4946_2
CN-SCN_Eukaryote_66x, CN-SCN_Eukaryote_66x, CN-SCN_Eukaryote_66x, CN-SCN_Eukaryote_66x, CN-SCN_Eukaryote_66x, Eukaryote

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467..1282
DNA (816bp) protein (272aa)
hypothetical protein n=1 Tax=SAR202 cluster bacterium SCGC AAA240-N13 RepID=UPI0003829F70
alpha/beta hydrolase fold domain-containing protein
Alpha/beta hydrolase fold domain-containing protein {ECO:0000313|EMBL:AHG64115.1}; TaxID=1247726 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae.;" source="Advenella mimigardefordensis DPN7.;"
SCN18_30_10_14_R1_B_scaffold_4946_3
SCNPILOT_EXPT_300_BF_Novosphingobium_63_58, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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1351..2268
DNA (918bp) protein (306aa)
C alpha-dehydrogenase n=1 Tax=Sphingobium sp. SYK-6 RepID=C0SUK1_9SPHN
ligN; C alpha-dehydrogenase
C alpha-dehydrogenase {ECO:0000313|EMBL:BAK68265.1}; Calpha-dehydrogenase {ECO:0000313|EMBL:BAH56685.1}; TaxID=627192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. SYK-6.;"
SCN18_30_10_14_R1_B_scaffold_4946_4
SCNPILOT_EXPT_300_BF_Novosphingobium_63_58, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2290..3294)
DNA (1005bp) protein (335aa)
Uncharacterized protein n=1 Tax=Asticcacaulis benevestitus DSM 16100 = ATCC BAA-896 RepID=V4R1N1_9CAUL
Uncharacterized protein {ECO:0000313|EMBL:ESQ85313.1}; TaxID=1121022 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Asticcacaulis.;" source="Asticcacaulis benevestitus DSM 16100 = ATCC BAA-896.;"
hypothetical protein
SCN18_30_10_14_R1_B_scaffold_4946_5
SCNPILOT_EXPT_300_BF_Novosphingobium_63_58, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3444..5762)
DNA (2319bp) protein (773aa)
TonB-dependent receptor-like protein n=1 Tax=Sphingobium sp. SYK-6 RepID=G2IT17_9SPHN
TonB-dependent receptor-like protein
TonB-dependent receptor-like protein {ECO:0000313|EMBL:BAK66527.1}; TaxID=627192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. SYK-6.;"
SCN18_30_10_14_R1_B_scaffold_4946_6
SCNPILOT_EXPT_300_BF_Novosphingobium_63_58, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(6037..7320)
DNA (1284bp) protein (428aa)
Major facilitator superfamily protein n=1 Tax=Sphingobium sp. SYK-6 RepID=G2IMM1_9SPHN
major facilitator superfamily protein
Major facilitator superfamily protein {ECO:0000313|EMBL:BAK67810.1}; TaxID=627192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. SYK-6.;"
SCN18_30_10_14_R1_B_scaffold_4946_7
CN-SCN_Eukaryote_66x, CN-SCN_Eukaryote_66x, CN-SCN_Eukaryote_66x, CN-SCN_Eukaryote_66x, CN-SCN_Eukaryote_66x, Eukaryote

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7529..8356
DNA (828bp) protein (276aa)
hypothetical protein n=1 Tax=SAR202 cluster bacterium SCGC AAA240-N13 RepID=UPI0003829F70
alpha/beta hydrolase fold domain-containing protein
Alpha/beta hydrolase fold domain-containing protein {ECO:0000313|EMBL:AHG64115.1}; TaxID=1247726 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae.;" source="Advenella mimigardefordensis DPN7.;"
SCN18_30_10_14_R1_B_scaffold_4946_8
unknown

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comp(8218..8781)
DNA (564bp) protein (188aa)

This feature has no annotations

SCN18_30_10_14_R1_B_scaffold_4946_9
SCNPILOT_EXPT_300_BF_Novosphingobium_63_58, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(8858..10120)
DNA (1263bp) protein (421aa)
Major facilitator superfamily protein n=1 Tax=Sphingomonas sp. MM-1 RepID=M4S912_9SPHN
major facilitator superfamily protein
Major facilitator superfamily protein {ECO:0000313|EMBL:AGH50979.1}; TaxID=745310 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. MM-1.;"
SCN18_30_10_14_R1_B_scaffold_4946_10
SCNPILOT_CONT_500_P_Xanthomonadales_66_42, SCNPILOT_CONT_500_P_Xanthomonadales_66_42, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(10121..10489)
DNA (369bp) protein (123aa)
Putative uncharacterized protein n=1 Tax=Sphingobium sp. SYK-6 RepID=G2ITL0_9SPHN
Alpha/beta hydrolase {ECO:0000313|EMBL:KHK92742.1}; TaxID=1348853 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium malaysiense.;"
hypothetical protein
SCN18_30_10_14_R1_B_scaffold_4946_11
unknown

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10852..11031
DNA (180bp) protein (60aa)

This feature has no annotations

Displaying 11 items

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