ggKbase home page

SCN18_30_10_14_R1_B_scaffold_11155

Search features with annotation key words

Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_30_10_14_R1_B_scaffold_11155_1
SCNPILOT_EXPT_1000_BF_Sphingomonas_65_55, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2..157
DNA (156bp) protein (52aa)
3-hydroxyisobutyrate dehydrogenase-related protein n=1 Tax=Sphingobium sp. SYK-6 RepID=G2ITH8_9SPHN
3-hydroxyisobutyrate dehydrogenase
3-hydroxyisobutyrate dehydrogenase-related protein {ECO:0000313|EMBL:BAK66688.1}; TaxID=627192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. SYK-6.;"
SCN18_30_10_14_R1_B_scaffold_11155_2
SCNPILOT_EXPT_1000_BF_Altererythrobacter_66_12, SCNPILOT_EXPT_1000_BF_Altererythrobacter_66_12, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

283..1509
DNA (1227bp) protein (409aa)
Beta-lactamase {ECO:0000313|EMBL:AKH43197.1}; EC=3.5.2.6 {ECO:0000313|EMBL:AKH43197.1};; TaxID=1267766 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Altererythrobacter.;" source="Altererythrobacter atlanticus.;"
Putative hydrolase n=1 Tax=Sphingobium sp. SYK-6 RepID=G2ITH7_9SPHN
putative hydrolase
SCN18_30_10_14_R1_B_scaffold_11155_3
SCNPILOT_EXPT_1000_BF_Sphingomonas_65_55, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1522..1908
DNA (387bp) protein (129aa)
4-carboxymuconolactone decarboxylase {ECO:0000313|EMBL:BAK66686.1}; EC=4.1.1.44 {ECO:0000313|EMBL:BAK66686.1};; TaxID=627192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. SYK-6.;"
4-carboxymuconolactone decarboxylase n=1 Tax=Sphingobium sp. SYK-6 RepID=G2ITH6_9SPHN
pcaC; 4-carboxymuconolactone decarboxylase
SCN18_30_10_14_R1_B_scaffold_11155_4
SCNPILOT_EXPT_1000_BF_Sphingomonas_65_55, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1934..2419
DNA (486bp) protein (162aa)
Putative uncharacterized protein n=1 Tax=Sphingobium sp. SYK-6 RepID=G2ITH5_9SPHN
hypothetical protein
Putative uncharacterized protein {ECO:0000313|EMBL:BAK66685.1}; TaxID=627192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. SYK-6.;"
SCN18_30_10_14_R1_B_scaffold_11155_5
SCNPILOT_EXPT_1000_BF_Sphingomonas_65_55, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2416..2838
DNA (423bp) protein (141aa)
Putative uncharacterized protein n=1 Tax=Sphingobium sp. SYK-6 RepID=G2ITH4_9SPHN
hypothetical protein
Putative uncharacterized protein {ECO:0000313|EMBL:BAK66684.1}; TaxID=627192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. SYK-6.;"
SCN18_30_10_14_R1_B_scaffold_11155_6
SCNPILOT_EXPT_1000_BF_Sphingomonas_65_55, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2835..3602
DNA (768bp) protein (256aa)
LinC-like SDR-family protein n=1 Tax=Sphingobium sp. SYK-6 RepID=G2ITH3_9SPHN
LinC-like SDR-family protein
LinC-like SDR-family protein {ECO:0000313|EMBL:BAK66683.1}; TaxID=627192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. SYK-6.;"
SCN18_30_10_14_R1_B_scaffold_11155_7
SCNPILOT_EXPT_1000_BF_Altererythrobacter_66_12, SCNPILOT_EXPT_1000_BF_Altererythrobacter_66_12, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3612..4367)
DNA (756bp) protein (252aa)
SCN18_30_10_14_R1_B_scaffold_11155_8
SCNPILOT_EXPT_1000_BF_Sphingomonas_65_55, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4399..4776
DNA (378bp) protein (126aa)
Putative hydrolase n=1 Tax=Sphingobium sp. SYK-6 RepID=G2ITH2_9SPHN
putative hydrolase
Putative hydrolase {ECO:0000313|EMBL:BAK66682.1}; TaxID=627192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. SYK-6.;"
SCN18_30_10_14_R1_B_scaffold_11155_9
SCNPILOT_EXPT_1000_BF_Sphingomonas_65_55, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4821..6383
DNA (1563bp) protein (521aa)
Putative uncharacterized protein n=1 Tax=Sphingobium sp. SYK-6 RepID=G2ITH1_9SPHN
hypothetical protein
Putative uncharacterized protein {ECO:0000313|EMBL:BAK66681.1}; TaxID=627192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. SYK-6.;"
SCN18_30_10_14_R1_B_scaffold_11155_10
SCNPILOT_EXPT_1000_BF_Altererythrobacter_66_12, SCNPILOT_EXPT_1000_BF_Altererythrobacter_66_12, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6415..6621
DNA (207bp) protein (69aa)
Putative uncharacterized protein n=1 Tax=Sphingobium sp. SYK-6 RepID=G2ITH0_9SPHN
hypothetical protein
Putative uncharacterized protein {ECO:0000313|EMBL:BAK66680.1}; TaxID=627192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. SYK-6.;"
SCN18_30_10_14_R1_B_scaffold_11155_11
SCNPILOT_EXPT_1000_BF_Sphingomonas_65_55, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6628..7140
DNA (513bp) protein (171aa)
LinC-like SDR-family protein n=1 Tax=Sphingobium sp. SYK-6 RepID=G2ITG9_9SPHN
LinC-like SDR-family protein
LinC-like SDR-family protein {ECO:0000313|EMBL:BAK66679.1}; TaxID=627192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. SYK-6.;"
Displaying 11 items

View Taxonomy