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SCN18_30_10_14_R1_B_scaffold_1148

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Displaying 25 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_30_10_14_R1_B_scaffold_1148_1
SCNPILOT_EXPT_1000_BF_Altererythrobacter_66_12, SCNPILOT_EXPT_1000_BF_Altererythrobacter_66_12, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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3..692
DNA (690bp) protein (230aa)
aryl-alcohol dehydrogenase n=1 Tax=Streptomyces acidiscabies RepID=UPI000287E8CF
Aryl-alcohol dehydrogenase {ECO:0000313|EMBL:KFF98907.1}; TaxID=1930 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces scabiei.;"
aryl-alcohol dehydrogenase
SCN18_30_10_14_R1_B_scaffold_1148_2
SCNPILOT_EXPT_1000_BF_Altererythrobacter_66_12, SCNPILOT_EXPT_1000_BF_Altererythrobacter_66_12, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

689..1573
DNA (885bp) protein (295aa)
Esterase n=1 Tax=uncultured bacterium RepID=E7DJY5_9BACT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AJP71377.1}; TaxID=1609977 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. WHSC-8.;"
SCN18_30_10_14_R1_B_scaffold_1148_3
SCNPILOT_EXPT_1000_BF_Sphingomonas_65_55, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1566..3221
DNA (1656bp) protein (552aa)
Putative hydrolase n=1 Tax=Sphingobium sp. SYK-6 RepID=G2IPH8_9SPHN
putative hydrolase
Putative hydrolase {ECO:0000313|EMBL:BAK68159.1}; TaxID=627192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. SYK-6.;"
SCN18_30_10_14_R1_B_scaffold_1148_4
SCNPILOT_EXPT_1000_BF_Sphingomonas_65_55, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3601..4887)
DNA (1287bp) protein (429aa)
Major facilitator superfamily protein n=1 Tax=Sphingobium sp. SYK-6 RepID=G2IKX9_9SPHN
major facilitator superfamily protein
Major facilitator superfamily protein {ECO:0000313|EMBL:BAK67531.1}; TaxID=627192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. SYK-6.;"
SCN18_30_10_14_R1_B_scaffold_1148_5
SCNPILOT_EXPT_1000_BF_Sphingomonas_65_55, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4921..5970)
DNA (1050bp) protein (350aa)
Putative hydrolase n=1 Tax=Sphingobium sp. SYK-6 RepID=G2IKY0_9SPHN
putative hydrolase
Putative hydrolase {ECO:0000313|EMBL:BAK67532.1}; TaxID=627192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. SYK-6.;"
SCN18_30_10_14_R1_B_scaffold_1148_6
SCNPILOT_EXPT_1000_BF_Sphingomonas_65_55, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5967..7256)
DNA (1290bp) protein (430aa)
Putative fumarylacetoacetase n=1 Tax=Sphingobium sp. SYK-6 RepID=G2IKY1_9SPHN
putative fumarylacetoacetase
Putative fumarylacetoacetase {ECO:0000313|EMBL:BAK67533.1}; TaxID=627192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. SYK-6.;"
SCN18_30_10_14_R1_B_scaffold_1148_7
SCNPILOT_EXPT_1000_BF_Sphingomonas_65_55, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7246..8235)
DNA (990bp) protein (330aa)
Putative hydrolase n=1 Tax=Sphingobium sp. SYK-6 RepID=G2IKY2_9SPHN
putative hydrolase
Putative hydrolase {ECO:0000313|EMBL:BAK67534.1}; TaxID=627192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. SYK-6.;"
SCN18_30_10_14_R1_B_scaffold_1148_8
SCNPILOT_EXPT_1000_BF_Sphingomonas_65_55, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8350..8979
DNA (630bp) protein (210aa)
Putative TetR family transcriptional regulator n=1 Tax=Sphingobium sp. SYK-6 RepID=G2IKY3_9SPHN
putative TetR family transcriptional regulator
Putative TetR family transcriptional regulator {ECO:0000313|EMBL:BAK67535.1}; TaxID=627192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. SYK-6.;"
SCN18_30_10_14_R1_B_scaffold_1148_9
SCNPILOT_EXPT_1000_BF_Sphingomonas_65_55, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9016..9951)
DNA (936bp) protein (312aa)
Putative uncharacterized protein n=1 Tax=Sphingobium sp. SYK-6 RepID=G2IKY4_9SPHN
hypothetical protein
Putative uncharacterized protein {ECO:0000313|EMBL:BAK67536.1}; TaxID=627192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. SYK-6.;"
SCN18_30_10_14_R1_B_scaffold_1148_10
SCNPILOT_EXPT_1000_BF_Sphingomonas_65_55, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9971..11086)
DNA (1116bp) protein (372aa)
Putative oxidoreductase n=1 Tax=Sphingobium sp. SYK-6 RepID=G2IKY5_9SPHN
putative oxidoreductase
Putative oxidoreductase {ECO:0000313|EMBL:BAK67537.1}; TaxID=627192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. SYK-6.;"
SCN18_30_10_14_R1_B_scaffold_1148_11
SCNPILOT_EXPT_1000_BF_Sphingomonas_65_55, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11083..11991)
DNA (909bp) protein (303aa)
Glyoxalase-family protein n=1 Tax=Sphingobium sp. SYK-6 RepID=G2IKY6_9SPHN
glyoxalase-family protein
Glyoxalase-family protein {ECO:0000313|EMBL:BAK67538.1}; TaxID=627192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. SYK-6.;"
SCN18_30_10_14_R1_B_scaffold_1148_12
SCNPILOT_EXPT_1000_BF_Sphingomonas_65_55, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12063..14516)
DNA (2454bp) protein (818aa)
TonB-dependent receptor-like protein n=1 Tax=Sphingobium sp. SYK-6 RepID=G2IKY7_9SPHN
TonB-dependent receptor-like protein {ECO:0000313|EMBL:BAK67539.1}; TaxID=627192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. SYK-6.;"
TonB-dependent receptor-like protein
SCN18_30_10_14_R1_B_scaffold_1148_13
SCNPILOT_EXPT_300_BF_Sphingomonas_67_13, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14708..15577
DNA (870bp) protein (290aa)
Putative uncharacterized protein n=1 Tax=Sphingobium sp. SYK-6 RepID=G2IKY8_9SPHN
hypothetical protein
Putative uncharacterized protein {ECO:0000313|EMBL:BAK67540.1}; TaxID=627192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. SYK-6.;"
SCN18_30_10_14_R1_B_scaffold_1148_14
SCNPILOT_EXPT_1000_BF_Altererythrobacter_66_12, SCNPILOT_EXPT_1000_BF_Altererythrobacter_66_12, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15602..16147)
DNA (546bp) protein (182aa)
Putative uncharacterized protein n=1 Tax=Sphingobium sp. SYK-6 RepID=G2IKY9_9SPHN
hypothetical protein
Putative uncharacterized protein {ECO:0000313|EMBL:BAK67541.1}; TaxID=627192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. SYK-6.;"
SCN18_30_10_14_R1_B_scaffold_1148_15
CN-SCN_Phenylobacterium_31x, RIFCSPHIGHO2_01_FULL_Phenylobacterium_69_31_curated, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(16198..16803)
DNA (606bp) protein (202aa)
Carboxymuconolactone decarboxylase n=1 Tax=Sphingobium chlorophenolicum L-1 RepID=F6F258_SPHCR
Uncharacterized protein {ECO:0000313|EMBL:AJR23221.1}; TaxID=484429 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. YBL2.;"
carboxymuconolactone decarboxylase
SCN18_30_10_14_R1_B_scaffold_1148_16
SCNPILOT_EXPT_1000_BF_Altererythrobacter_66_12, SCNPILOT_EXPT_1000_BF_Altererythrobacter_66_12, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16793..18400)
DNA (1608bp) protein (536aa)
hypothetical protein n=1 Tax=Sphingobium xenophagum RepID=UPI0002E386DB
glucose-methanol-choline oxidoreductase
Glucose-methanol-choline oxidoreductase {ECO:0000313|EMBL:EHJ61444.1}; TaxID=1088721 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium pentaromativorans US6-1.;"
SCN18_30_10_14_R1_B_scaffold_1148_17
SCNPILOT_EXPT_1000_BF_Altererythrobacter_66_12, SCNPILOT_EXPT_1000_BF_Altererythrobacter_66_12, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18407..18859)
DNA (453bp) protein (151aa)
hypothetical protein n=1 Tax=Sphingobium xenophagum RepID=UPI0003678893
hypothetical protein
Putative uncharacterized protein {ECO:0000313|EMBL:BAK65612.1}; TaxID=627192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. SYK-6.;"
SCN18_30_10_14_R1_B_scaffold_1148_18
SCNPILOT_EXPT_1000_BF_Altererythrobacter_66_12, SCNPILOT_EXPT_1000_BF_Altererythrobacter_66_12, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18863..19270)
DNA (408bp) protein (136aa)
hypothetical protein n=1 Tax=Sphingobium xenophagum RepID=UPI0003609CE6
SCN18_30_10_14_R1_B_scaffold_1148_19
SCNPILOT_EXPT_1000_BF_Altererythrobacter_66_12, SCNPILOT_EXPT_1000_BF_Altererythrobacter_66_12, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19272..20750)
DNA (1479bp) protein (493aa)
thmS1; succinate semialdehyde dehydrogenase (EC:1.2.1.16)
hypothetical protein n=1 Tax=Sphingobium xenophagum RepID=UPI00036C87EC
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_65_24_curated
SCN18_30_10_14_R1_B_scaffold_1148_20
SCNPILOT_EXPT_1000_BF_Altererythrobacter_66_12, SCNPILOT_EXPT_1000_BF_Altererythrobacter_66_12, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20909..21832
DNA (924bp) protein (308aa)
hypothetical protein n=1 Tax=Sphingobium xenophagum RepID=UPI0002F62A46
helix-turn-helix domain protein
Transcriptional regulator, AraC family {ECO:0000313|EMBL:EEC33153.1}; TaxID=557724 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia; pseudomallei group.;" source="Burkholderia pseudomallei 576.;"
SCN18_30_10_14_R1_B_scaffold_1148_21
SCNPILOT_EXPT_1000_BF_Altererythrobacter_66_12, SCNPILOT_EXPT_1000_BF_Altererythrobacter_66_12, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21955..23280
DNA (1326bp) protein (442aa)
hypothetical protein n=1 Tax=Sphingobium xenophagum RepID=UPI0003132D03
Uncharacterized protein {ECO:0000313|EMBL:KJK16926.1}; TaxID=1619952 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae.;" source="Burkholderiaceae bacterium 16.;"
major facilitator superfamily protein
SCN18_30_10_14_R1_B_scaffold_1148_22
CN-SCN_Devosia_27x, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23335..23820
DNA (486bp) protein (162aa)
hypothetical protein n=1 Tax=Blastomonas sp. AAP53 RepID=UPI000313EA43
Uncharacterized protein {ECO:0000313|EMBL:KGM34301.1}; TaxID=1398085 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Inquilinus.;" source="Inquilinus limosus MP06.;"
glutathione-dependent formaldehyde-activating protein
SCN18_30_10_14_R1_B_scaffold_1148_23
SCNPILOT_EXPT_300_BF_Novosphingobium_63_58, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23838..24446
DNA (609bp) protein (203aa)
TrkA-N n=1 Tax=Sphingomonas sp. LH128 RepID=J8VTT1_9SPHN
Rrf2-linked NADH-flavin reductase {ECO:0000313|EMBL:GAO53694.1}; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. MD-1.;"
3-beta hydroxysteroid dehydrogenase
SCN18_30_10_14_R1_B_scaffold_1148_24
SCNPILOT_EXPT_300_BF_Novosphingobium_63_58, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24440..25759)
DNA (1320bp) protein (440aa)
Major facilitator superfamily protein n=1 Tax=Sphingobium sp. SYK-6 RepID=G2IMM1_9SPHN
major facilitator superfamily protein
Major facilitator superfamily protein {ECO:0000313|EMBL:BAK67810.1}; TaxID=627192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. SYK-6.;"
SCN18_30_10_14_R1_B_scaffold_1148_25
SCNPILOT_EXPT_1000_BF_Sphingomonas_65_55, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25849..26751)
DNA (903bp) protein (301aa)
Putative uncharacterized protein n=1 Tax=Sphingobium sp. SYK-6 RepID=G2IS42_9SPHN
hypothetical protein
Putative uncharacterized protein {ECO:0000313|EMBL:BAK66202.1}; TaxID=627192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. SYK-6.;"
Displaying 25 items

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