name | lists | location/seqs | annotations | notes |
---|---|---|---|---|
SCN18_30_10_14_R1_B_scaffold_1270_1
SCNPILOT_EXPT_300_BF_Sphingomonas_67_13, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
156..992
|
hypothetical protein n=1 Tax=Sphingomonas melonis RepID=UPI000381CD10
Sphingomonas taxi strain 30a NODE_3, whole genome shotgun sequence {ECO:0000313|EMBL:KIU30142.1}; TaxID=1549858 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas taxi.;"
amidohydrolase
|
|
SCN18_30_10_14_R1_B_scaffold_1270_2
CN-SCN_Sphingomonas_18x, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
996..1715
|
3-oxoacid CoA-transferase, A subunit (EC:2.8.3.5)
Succinyl-CoA:3-ketoacid-CoA transferase n=1 Tax=Sphingobium lactosutens DS20 RepID=T0HSA8_9SPHN
CatI {ECO:0000313|EMBL:AHZ46839.1}; TaxID=595605 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium wenxiniae (strain DSM 21828 / JZ-1).;"
|
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SCN18_30_10_14_R1_B_scaffold_1270_3
SCNPILOT_EXPT_300_BF_Sphingomonadales_67_9, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(1813..2070)
|
transglycosylase n=1 Tax=Novosphingobium sp. B-7 RepID=UPI0003B48E73
hypothetical protein
Scaffold1, whole genome shotgun sequence {ECO:0000313|EMBL:KIS34149.1}; TaxID=1609758 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. P6W.;"
|
|
SCN18_30_10_14_R1_B_scaffold_1270_4
SCNPILOT_EXPT_300_BF_Sphingomonas_67_13, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(2196..2792)
|
methyltransferase n=1 Tax=Sphingobium sp. YL23 RepID=UPI0003B7441C
Methyltransferase {ECO:0000313|EMBL:AJR26260.1}; TaxID=484429 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. YBL2.;"
putative methyltransferase
|
|
SCN18_30_10_14_R1_B_scaffold_1270_5
SCNPILOT_EXPT_1000_BF_Sphingomonas_65_55, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(2933..6553)
|
Proline dehydrogenase/delta-1-pyrroline-5-carboxylate dehydrogenase {ECO:0000313|EMBL:BAK65383.1}; EC=1.5.1.12 {ECO:0000313|EMBL:BAK65383.1};; EC=1.5.99.8 {ECO:0000313|EMBL:BAK65383.1};; TaxID=627192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. SYK-6.;"
Proline dehydrogenase/delta-1-pyrroline-5-carboxylate dehydrogenase n=1 Tax=Sphingobium sp. SYK-6 RepID=G2IMC8_9SPHN
putA; proline dehydrogenase
|
|
SCN18_30_10_14_R1_B_scaffold_1270_6
SCNPILOT_EXPT_300_BF_Sphingomonas_67_13, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
6652..7113
|
Lrp/AsnC-family transcriptional regulator n=3 Tax=Sphingobium RepID=D4Z0J8_SPHJU
ArsR family transcriptional regulator {ECO:0000313|EMBL:AJR25814.1}; TaxID=484429 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. YBL2.;"
Lrp/AsnC-family transcriptional regulator
|
|
SCN18_30_10_14_R1_B_scaffold_1270_7
SCNPILOT_EXPT_1000_BF_Altererythrobacter_66_12, SCNPILOT_EXPT_1000_BF_Altererythrobacter_66_12, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
7217..7750
|
Putative uncharacterized protein n=1 Tax=Sphingobium sp. SYK-6 RepID=G2IQT1_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:AKH43824.1}; TaxID=1267766 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Altererythrobacter.;" source="Altererythrobacter atlanticus.;"
hypothetical protein
|
|
SCN18_30_10_14_R1_B_scaffold_1270_8
unknown
|
Not on your lists |
comp(7880..8485)
|
This feature has no annotations |
|
SCN18_30_10_14_R1_B_scaffold_1270_9
SCNPILOT_CONT_500_P_Xanthomonadales_66_42, SCNPILOT_CONT_500_P_Xanthomonadales_66_42, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(8560..9642)
|
Uncharacterized protein n=1 Tax=Tistrella mobilis (strain KA081020-065) RepID=I3TK50_TISMK
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFK53138.1}; TaxID=1110502 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Tistrella.;" source="Tistrella mobilis (strain KA081020-065).;"
|
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SCN18_30_10_14_R1_B_scaffold_1270_10
SCNPILOT_EXPT_1000_BF_Sphingomonas_65_55, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(9916..11475)
|
Putative esterase n=1 Tax=Sphingobium sp. SYK-6 RepID=G2IN48_9SPHN
Chlorogenate esterase {ECO:0000313|EMBL:GAO57029.1}; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. MD-1.;"
putative esterase
|
|
SCN18_30_10_14_R1_B_scaffold_1270_11
CN-SCN_Phenylobacterium_31x, RIFCSPHIGHO2_01_FULL_Phenylobacterium_69_31_curated, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
11685..12467
|
Tax=RIFCSPHIGHO2_01_FULL_Phenylobacterium_69_31_curated
|
|
SCN18_30_10_14_R1_B_scaffold_1270_12
SCNPILOT_EXPT_1000_BF_Sphingomonas_65_55, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(12591..13460)
|
Putative hydrolase n=1 Tax=Sphingobium sp. SYK-6 RepID=G2IQ36_9SPHN
putative hydrolase
Putative hydrolase {ECO:0000313|EMBL:BAK65864.1}; TaxID=627192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. SYK-6.;"
|
|
SCN18_30_10_14_R1_B_scaffold_1270_13
SCNPILOT_EXPT_300_BF_Sphingomonas_67_13, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
13657..15279
|
Putative dehydrogenase n=1 Tax=Sphingobium sp. SYK-6 RepID=G2IJI6_9SPHN
putative dehydrogenase
Putative dehydrogenase {ECO:0000313|EMBL:BAK64856.1}; TaxID=627192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. SYK-6.;"
|
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SCN18_30_10_14_R1_B_scaffold_1270_14
unknown
|
Not on your lists |
15411..16091
|
This feature has no annotations |
|
SCN18_30_10_14_R1_B_scaffold_1270_15
CN-SCN_Arenimonas_307x, Arenimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
16096..17601
|
Methylmalonate-semialdehyde dehydrogenase {ECO:0000313|EMBL:BAK67490.1}; EC=1.2.1.27 {ECO:0000313|EMBL:BAK67490.1};; TaxID=627192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. SYK-6.;"
Methylmalonate-semialdehyde dehydrogenase n=1 Tax=Sphingobium sp. SYK-6 RepID=G2IKT8_9SPHN
mmsA; methylmalonate-semialdehyde dehydrogenase
|
|
SCN18_30_10_14_R1_B_scaffold_1270_16
SCNPILOT_EXPT_1000_BF_Sphingomonas_65_55, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(17744..19876)
|
Putative uncharacterized protein n=1 Tax=Sphingobium sp. SYK-6 RepID=G2IKT7_9SPHN
hypothetical protein
Putative uncharacterized protein {ECO:0000313|EMBL:BAK67489.1}; TaxID=627192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. SYK-6.;"
|
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SCN18_30_10_14_R1_B_scaffold_1270_17
SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(19947..20744)
|
Putative uncharacterized protein n=1 Tax=Sphingobium sp. SYK-6 RepID=G2IKT6_9SPHN
hypothetical protein
Putative uncharacterized protein {ECO:0000313|EMBL:BAK67488.1}; TaxID=627192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. SYK-6.;"
|
|
SCN18_30_10_14_R1_B_scaffold_1270_18
SCNPILOT_EXPT_1000_BF_Sphingomonas_65_55, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(20741..22633)
|
Putative uncharacterized protein n=1 Tax=Sphingobium sp. SYK-6 RepID=G2IKT5_9SPHN
hypothetical protein
Putative uncharacterized protein {ECO:0000313|EMBL:BAK67487.1}; TaxID=627192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. SYK-6.;"
|
|
SCN18_30_10_14_R1_B_scaffold_1270_19
SCNPILOT_EXPT_1000_BF_Sphingomonas_65_55, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(22623..24701)
|
Putative uncharacterized protein n=1 Tax=Sphingobium sp. SYK-6 RepID=G2IKT4_9SPHN
hypothetical protein
Putative uncharacterized protein {ECO:0000313|EMBL:BAK67486.1}; TaxID=627192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. SYK-6.;"
|
|
SCN18_30_10_14_R1_B_scaffold_1270_20
SCNPILOT_CONT_750_BF_Rhodospirillales_70_18, SCNPILOT_CONT_750_BF_Rhodospirillales_70_18, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(24698..25306)
|
Putative glutathione S-transferase n=1 Tax=Sphingobium sp. SYK-6 RepID=G2IKT2_9SPHN
putative glutathione S-transferase
Putative glutathione S-transferase {ECO:0000313|EMBL:BAK67484.1}; TaxID=627192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. SYK-6.;"
|
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SCN18_30_10_14_R1_B_scaffold_1270_21
SCNPILOT_CONT_750_P_Burkholderiales_64_62, Pandoraea, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(25324..26874)
|
Sodium/solute symporter family protein n=1 Tax=Sphingobium sp. SYK-6 RepID=G2IKT1_9SPHN
sodium/solute symporter family protein
Sodium/solute symporter family protein {ECO:0000313|EMBL:BAK67483.1}; TaxID=627192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. SYK-6.;"
|
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SCN18_30_10_14_R1_B_scaffold_1270_22
SCNPILOT_CONT_500_BF_Rhizobiales_63_22, SCNPILOT_CONT_500_BF_Rhizobiales_63_22, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
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Not on your lists |
comp(26871..27086)
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Conserved hypothetical membrane protein n=1 Tax=Sphingobium sp. SYK-6 RepID=G2IKT0_9SPHN
hypothetical protein
Conserved hypothetical membrane protein {ECO:0000313|EMBL:BAK67482.1}; TaxID=627192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. SYK-6.;"
|
|
SCN18_30_10_14_R1_B_scaffold_1270_23
SCNPILOT_EXPT_1000_BF_Rhizobiales_69_8_partial, SCNPILOT_EXPT_1000_BF_Rhizobiales_69_8_partial, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
27242..28189
|
Putative LysR family transcriptional regulator n=1 Tax=Sphingobium sp. SYK-6 RepID=G2IKS9_9SPHN
putative LysR family transcriptional regulator
Putative LysR family transcriptional regulator {ECO:0000313|EMBL:BAK67481.1}; TaxID=627192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. SYK-6.;"
|
|
SCN18_30_10_14_R1_B_scaffold_1270_24
SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
28308..29468
|
Alcohol dehydrogenase {ECO:0000313|EMBL:BAK67480.1}; EC=1.1.1.- {ECO:0000313|EMBL:BAK67480.1};; TaxID=627192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. SYK-6.;"
Alcohol dehydrogenase n=1 Tax=Sphingobium sp. SYK-6 RepID=G2IKS8_9SPHN
alcohol dehydrogenase
|
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SCN18_30_10_14_R1_B_scaffold_1270_25
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(29601..30308)
|
3-oxoacid CoA-transferase subunit A (EC:2.8.3.5)
Acetate/3-ketoacid CoA transferase, subunit A n=2 Tax=Caulobacter crescentus (strain ATCC 19089 / CB15) RepID=B8GZG4_CAUCN
CatI {ECO:0000313|EMBL:AHZ46839.1}; TaxID=595605 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium wenxiniae (strain DSM 21828 / JZ-1).;"
|
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SCN18_30_10_14_R1_B_scaffold_1270_26
SCNPILOT_EXPT_1000_BF_Sphingomonas_65_55, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(30320..31339)
|
Putative ABC transporter substrate binding protein n=1 Tax=Sphingobium sp. SYK-6 RepID=G2IS45_9SPHN
putative ABC transporter substrate binding protein
Putative ABC transporter substrate binding protein {ECO:0000313|EMBL:BAK66205.1}; TaxID=627192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. SYK-6.;"
|
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SCN18_30_10_14_R1_B_scaffold_1270_27
SCNPILOT_EXPT_750_BF_Burkholderiales_68_35, SCNPILOT_EXPT_750_BF_Burkholderiales_68_35, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(31336..32169)
|
Putative uncharacterized protein n=1 Tax=Sphingobium sp. SYK-6 RepID=G2IKS5_9SPHN
hypothetical protein
Putative uncharacterized protein {ECO:0000313|EMBL:BAK67477.1}; TaxID=627192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. SYK-6.;"
|
|
SCN18_30_10_14_R1_B_scaffold_1270_28
SCN_Comamonas_36x, SCN_Comamonas_36x, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
32453..33391
|
3-oxoacyl-(Acyl-carrier-protein) reductase {ECO:0000313|EMBL:KEQ53823.1}; EC=1.1.1.100 {ECO:0000313|EMBL:KEQ53823.1};; TaxID=46429 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium chlorophenolicum.;"
3-oxoacyl-(acyl-carrier-protein) reductase (EC:1.1.1.100)
3-oxoacyl-(Acyl-carrier-protein) reductase n=1 Tax=Sphingobium chlorophenolicum L-1 RepID=F6F257_SPHCR
|
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SCN18_30_10_14_R1_B_scaffold_1270_29
SCNpilot_BF_INOC_Bordetella_67_10, SCNpilot_BF_INOC_Bordetella_67_10, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(33245..34189)
|
Transcriptional regulator, LysR family n=1 Tax=Sphingobium chlorophenolicum L-1 RepID=F6F2A6_SPHCR
CysB family transcriptional regulator {ECO:0000313|EMBL:AJR23241.1}; TaxID=484429 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. YBL2.;"
LysR family transcriptional regulator
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