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SCN18_30_10_14_R1_B_scaffold_1978

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Displaying 21 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_30_10_14_R1_B_scaffold_1978_1
SCNPILOT_EXPT_1000_BF_Altererythrobacter_66_12, SCNPILOT_EXPT_1000_BF_Altererythrobacter_66_12, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3..2048
DNA (2046bp) protein (682aa)
methylmalonyl-CoA mutase (EC:5.4.99.2)
methylmalonyl-CoA mutase n=1 Tax=Sphingomonas echinoides RepID=UPI00026CA0DC
Methylmalonyl-CoA mutase large subunit {ECO:0000313|EMBL:GAM01927.1}; TaxID=1219049 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas parapaucimobilis NBRC 15100.;"
SCN18_30_10_14_R1_B_scaffold_1978_2
CN-SCN_Erythrobacter_14x, CN-SCN_Erythrobacter_14x, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2090..3373
DNA (1284bp) protein (428aa)
Methionine gamma-lyase {ECO:0000313|EMBL:AKH44214.1}; EC=4.4.1.11 {ECO:0000313|EMBL:AKH44214.1};; TaxID=1267766 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Altererythrobacter.;" source="Altererythrobacter atlanticus.;"
O-acetylhomoserine aminocarboxypropyltransferase (EC:2.5.1.49)
O-acetylhomoserine sulfhydrolase n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=Q2GA65_NOVAD
SCN18_30_10_14_R1_B_scaffold_1978_3
SCNPILOT_CONT_1000_BF_Rhizobiales_65_18, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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3607..4551
DNA (945bp) protein (315aa)
Glycosyl transferase family 2 n=1 Tax=Pseudoxanthomonas spadix (strain BD-a59) RepID=G7UVV2_PSEUP
family 2 glycosyl transferase
Glycosyl transferase family 2 {ECO:0000313|EMBL:AER56421.1}; TaxID=1045855 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Pseudoxanthomonas.;" source="Pseudoxanthomonas spadix (strain BD-a59).;"
SCN18_30_10_14_R1_B_scaffold_1978_4
SCNPILOT_CONT_750_BF_Rhodospirillales_70_18, SCNPILOT_CONT_750_BF_Rhodospirillales_70_18, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4537..6006)
DNA (1470bp) protein (490aa)
Uncharacterized protein n=1 Tax=Oceaniovalibus guishaninsula JLT2003 RepID=K2HE24_9RHOB
Uncharacterized protein {ECO:0000313|EMBL:EKE45713.1}; TaxID=1231392 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Oceaniovalibus.;" source="Oceaniovalibus guishaninsula JLT2003.;"
membrane protein
SCN18_30_10_14_R1_B_scaffold_1978_5
SCNpilot_BF_INOC_Dechloromonas_67_13, SCNpilot_BF_INOC_Dechloromonas_67_13, SCNpilot_BF_INOC_Dechloromonas_67_13, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6003..6944)
DNA (942bp) protein (314aa)
hypothetical protein n=1 Tax=Thioalkalivibrio sp. ALE23 RepID=UPI00036537F4
UDP-glucose 4-epimerase {ECO:0000313|EMBL:EYF00501.1}; TaxID=1192034 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Chondromyces.;" source="Chondromyces apiculatus DSM 436.;"
NAD-dependent epimerase/dehydratase family protein
SCN18_30_10_14_R1_B_scaffold_1978_6
CN-SCN_Acidobacteria_32x, CN-SCN_Acidobacteria_32x, CN-SCN_Acidobacteria_32x, CN-SCN_Acidobacteria_32x, CN-SCN_Acidobacteria_32x, Acidobacteria

Not on your lists

comp(6941..7990)
DNA (1050bp) protein (350aa)
Glycosyltransferases involved in cell wall biogenesis n=1 Tax=Cycloclasticus zancles 7-ME RepID=S5TXC6_9GAMM
Glycosyltransferases involved in cell wall biogenesis
Glycosyltransferases involved in cell wall biogenesis {ECO:0000313|EMBL:AGS39775.1}; TaxID=1198232 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Piscirickettsiaceae; Cycloclasticus.;" source="Cycloclasticus zancles 7-ME.;"
SCN18_30_10_14_R1_B_scaffold_1978_7
CN-SCN_Gemmatimonadetes_22x, CN-SCN_Gemmatimonadetes_22x, CN-SCN_Gemmatimonadetes_22x, CN-SCN_Gemmatimonadetes_22x, Gemmatimonadetes, Bacteria

Not on your lists

comp(7987..10395)
DNA (2409bp) protein (803aa)
Uncharacterized protein n=1 Tax=Phycisphaera mikurensis (strain NBRC 102666 / KCTC 22515 / FYK2301M01) RepID=I0IFT1_PHYMF
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAM04119.1}; TaxID=1142394 species="Bacteria; Planctomycetes; Phycisphaerae; Phycisphaerales; Phycisphaeraceae; Phycisphaera.;" source="Phycisphaera mikurensis (strain NBRC 102666 / KCTC 22515 /; FYK2301M01).;"
SCN18_30_10_14_R1_B_scaffold_1978_8
Chlamydia sp. 'Rubis'_SCNPILOT_EXPT_500_P_Chlamydiales_33_8, Chlamydia, Chlamydiales, Chlamydiia, Chlamydiae, Bacteria

Not on your lists

10641..11573
DNA (933bp) protein (311aa)
Glycosyl transferase, family 2 n=1 Tax=Geobacter uraniireducens (strain Rf4) RepID=A5G409_GEOUR
Glycosyl transferase, family 2 {ECO:0000313|EMBL:KFC67373.1}; TaxID=1502724 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. LC5.;"
glycosyl transferase family protein
SCN18_30_10_14_R1_B_scaffold_1978_9
SCNPILOT_CONT_1000_BF_Chloroflexi_54_27, SCNPILOT_CONT_1000_BF_Chloroflexi_54_27, SCNPILOT_CONT_1000_BF_Chloroflexi_54_27, SCNPILOT_CONT_1000_BF_Chloroflexi_54_27, SCNPILOT_CONT_1000_BF_Chloroflexi_54_27, Bacteria

Not on your lists

11648..12562
DNA (915bp) protein (305aa)
hypothetical protein n=1 Tax=Calothrix sp. PCC 7103 RepID=UPI0002E51BD8
Glycosyl transferase, family 2 {ECO:0000313|EMBL:EYD75952.1}; TaxID=442562 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Rubellimicrobium.;" source="Rubellimicrobium mesophilum DSM 19309.;"
family 2 glycosyl transferase
SCN18_30_10_14_R1_B_scaffold_1978_10
Singulisphaera acidiphila_SCNPILOT_SOLID2_TRIM150_Singulisphaera_70_9, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

12559..13569
DNA (1011bp) protein (337aa)
hypothetical protein n=1 Tax=Synechococcus sp. PCC 7336 RepID=UPI00034DC34B
Oxidoreductase-like protein {ECO:0000313|EMBL:EYD75953.1}; TaxID=442562 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Rubellimicrobium.;" source="Rubellimicrobium mesophilum DSM 19309.;"
hypothetical protein
SCN18_30_10_14_R1_B_scaffold_1978_11
CN-SCN_Lautropia_15x, CN-SCN_Lautropia_15x, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13566..14657
DNA (1092bp) protein (364aa)
hypothetical protein n=1 Tax=Synechococcus sp. PCC 7336 RepID=UPI00037EF2A8
Hopanoid-associated sugar epimerase {ECO:0000313|EMBL:KFC67370.1}; TaxID=1502724 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. LC5.;"
hypothetical protein
SCN18_30_10_14_R1_B_scaffold_1978_12
SCNpilot_P_inoc_Thiobacillus_strain2_63_34, SCNpilot_P_inoc_Thiobacillus_strain2_63_34, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14650..15753
DNA (1104bp) protein (368aa)
Glycosyl transferase family 2 n=1 Tax=Methylobacterium sp. (strain 4-46) RepID=B0UQM6_METS4
Putative methyltransferase {ECO:0000313|EMBL:EYD75956.1}; TaxID=442562 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Rubellimicrobium.;" source="Rubellimicrobium mesophilum DSM 19309.;"
glycosyl transferase family protein
SCN18_30_10_14_R1_B_scaffold_1978_13
SCNPILOT_CONT_1000_BF_Chloroflexi_54_27, SCNPILOT_CONT_1000_BF_Chloroflexi_54_27, SCNPILOT_CONT_1000_BF_Chloroflexi_54_27, SCNPILOT_CONT_1000_BF_Chloroflexi_54_27, SCNPILOT_CONT_1000_BF_Chloroflexi_54_27, Bacteria

Not on your lists

15711..16172
DNA (462bp) protein (154aa)
hypothetical protein n=1 Tax=Hymenobacter norwichensis RepID=UPI0003B33210
Putative methyltransferase {ECO:0000313|EMBL:EYD75956.1}; TaxID=442562 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Rubellimicrobium.;" source="Rubellimicrobium mesophilum DSM 19309.;"
hypothetical protein
SCN18_30_10_14_R1_B_scaffold_1978_14
SCNPILOT_CONT_1000_BF_Chloroflexi_54_27, SCNPILOT_CONT_1000_BF_Chloroflexi_54_27, SCNPILOT_CONT_1000_BF_Chloroflexi_54_27, SCNPILOT_CONT_1000_BF_Chloroflexi_54_27, SCNPILOT_CONT_1000_BF_Chloroflexi_54_27, Bacteria

Not on your lists

16156..17094
DNA (939bp) protein (313aa)
Polysaccharide deacetylase n=1 Tax=Crinalium epipsammum PCC 9333 RepID=K9VZS9_9CYAN
Polysaccharide deacetylase {ECO:0000313|EMBL:EYD75957.1}; TaxID=442562 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Rubellimicrobium.;" source="Rubellimicrobium mesophilum DSM 19309.;"
polysaccharide deacetylase
SCN18_30_10_14_R1_B_scaffold_1978_15
SCNPILOT_CONT_1000_BF_Chloroflexi_54_27, SCNPILOT_CONT_1000_BF_Chloroflexi_54_27, SCNPILOT_CONT_1000_BF_Chloroflexi_54_27, SCNPILOT_CONT_1000_BF_Chloroflexi_54_27, SCNPILOT_CONT_1000_BF_Chloroflexi_54_27, Bacteria

Not on your lists

17091..17960
DNA (870bp) protein (290aa)
Glycosyl transferase family 2 n=1 Tax=Chroococcidiopsis thermalis PCC 7203 RepID=K9TZ69_9CYAN
Glycosyltransferase involved in cell wall biogenesis-like protein {ECO:0000313|EMBL:EYD75958.1}; TaxID=442562 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Rubellimicrobium.;" source="Rubellimicrobium mesophilum DSM 19309.;"
family 2 glycosyl transferase
SCN18_30_10_14_R1_B_scaffold_1978_16
SCNPILOT_CONT_1000_BF_Chloroflexi_54_27, SCNPILOT_CONT_1000_BF_Chloroflexi_54_27, SCNPILOT_CONT_1000_BF_Chloroflexi_54_27, SCNPILOT_CONT_1000_BF_Chloroflexi_54_27, SCNPILOT_CONT_1000_BF_Chloroflexi_54_27, Bacteria

Not on your lists

17960..18838
DNA (879bp) protein (293aa)
Glycosyl transferase family 2 n=1 Tax=Cyanothece sp. (strain PCC 7425 / ATCC 29141) RepID=B8HRA9_CYAP4
Glycosyl transferase family protein {ECO:0000313|EMBL:KFC67374.1}; TaxID=1502724 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. LC5.;"
family 2 glycosyl transferase
SCN18_30_10_14_R1_B_scaffold_1978_17
SCNPILOT_EXPT_500_BF_STEP10_Armatimonadetes_55_34, SCNPILOT_EXPT_500_BF_STEP10_Armatimonadetes_55_34, SCNPILOT_EXPT_500_BF_STEP10_Armatimonadetes_55_34, SCNPILOT_EXPT_500_BF_STEP10_Armatimonadetes_55_34, SCNPILOT_EXPT_500_BF_STEP10_Armatimonadetes_55_34, Bacteria

Not on your lists

comp(18860..20092)
DNA (1233bp) protein (411aa)
Teichoic acid export ATP-binding protein TagH {ECO:0000313|EMBL:EYD75960.1}; EC=3.6.3.40 {ECO:0000313|EMBL:EYD75960.1};; TaxID=442562 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Rubellimicrobium.;" source="Rubellimicrobium mesophilum DSM 19309.;"
teichoic-acid-transporting AtPase (EC:3.6.3.40)
hypothetical protein n=1 Tax=Oscillatoria sp. PCC 10802 RepID=UPI000347B6A0
SCN18_30_10_14_R1_B_scaffold_1978_18
CN-SCN_Acidobacteria_32x, CN-SCN_Acidobacteria_32x, CN-SCN_Acidobacteria_32x, CN-SCN_Acidobacteria_32x, CN-SCN_Acidobacteria_32x, Acidobacteria

Not on your lists

comp(20089..20946)
DNA (858bp) protein (286aa)
ABC-2 type transporter n=1 Tax=Nitrolancetus hollandicus Lb RepID=I4EEQ1_9CHLR
Transport permease protein {ECO:0000256|RuleBase:RU361157}; TaxID=1129897 species="Bacteria; Chloroflexi; Sphaerobacteridae; Sphaerobacterales; Sphaerobacterineae; Sphaerobacteraceae; Nitrolancea.;" source="Nitrolancea hollandica Lb.;"
polysaccharide/polyol phosphate ABC transporter permease
SCN18_30_10_14_R1_B_scaffold_1978_19
SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21100..21579)
DNA (480bp) protein (160aa)
hypothetical protein n=1 Tax=Wenxinia marina RepID=UPI0003820A3C
Wenxma_21, whole genome shotgun sequence {ECO:0000313|EMBL:KIQ67605.1}; TaxID=1123501 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Wenxinia.;" source="Wenxinia marina DSM 24838.;"
NUDIX hydrolase
SCN18_30_10_14_R1_B_scaffold_1978_20
SCNPILOT_EXPT_1000_BF_Sphingomonas_65_55, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21747..24383)
DNA (2637bp) protein (879aa)
TonB-dependent receptor-like protein n=1 Tax=Sphingobium sp. SYK-6 RepID=G2IKN7_9SPHN
TonB-dependent receptor-like protein {ECO:0000313|EMBL:BAK67439.1}; TaxID=627192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. SYK-6.;"
TonB-dependent receptor-like protein
SCN18_30_10_14_R1_B_scaffold_1978_21
SCNPILOT_EXPT_1000_BF_Sphingomonas_65_55, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24448..24903)
DNA (456bp) protein (152aa)
Transcriptional regulator MarR family n=1 Tax=Xanthomonas oryzae pv. oryzicola BLS256 RepID=G7TEG2_9XANT
MarR family transcriptional regulator
Transcriptional regulator MarR family {ECO:0000313|EMBL:AEQ95141.1}; TaxID=383407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas oryzae pv. oryzicola (strain BLS256).;"
Displaying 21 items

View Taxonomy