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SCN18_30_10_14_R1_B_scaffold_3119

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Displaying 9 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_30_10_14_R1_B_scaffold_3119_1
Brevundimonas diminuta_SCNPILOT_CONT_300_BF_Brevundimonas_67_6, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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1..552
DNA (552bp) protein (184aa)
Glycolate reductase {ECO:0000313|EMBL:BAK66101.1}; EC=1.1.1.- {ECO:0000313|EMBL:BAK66101.1};; TaxID=627192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. SYK-6.;"
Glycolate reductase n=1 Tax=Sphingobium sp. SYK-6 RepID=G2IRN5_9SPHN
glycolate reductase
SCN18_30_10_14_R1_B_scaffold_3119_2
CN-SCN_Phenylobacterium_31x, RIFCSPHIGHO2_01_FULL_Phenylobacterium_69_31_curated, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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675..1553
DNA (879bp) protein (293aa)
enoyl-CoA hydratase/isomerase n=1 Tax=Sphingomonas sp. KC8 RepID=UPI000248851A
enoyl-CoA hydratase/isomerase
Enoyl-CoA hydratase/isomerase {ECO:0000313|EMBL:ABQ68192.1}; TaxID=392499 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas wittichii (strain RW1 / DSM 6014 / JCM 10273).;"
SCN18_30_10_14_R1_B_scaffold_3119_3
SCNPILOT_EXPT_300_BF_Novosphingobium_63_58, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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2041..2457
DNA (417bp) protein (139aa)
Transposase (Fragment) n=1 Tax=Novosphingobium sp. AP12 RepID=J2P5Z9_9SPHN
Transposase {ECO:0000313|EMBL:EJL22477.1}; Flags: Fragment;; TaxID=1144305 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. AP12.;"
transposase
SCN18_30_10_14_R1_B_scaffold_3119_trna_1
unknown

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comp(2837..2909)
DNA (73bp)
transferRNA Val
SCN18_30_10_14_R1_B_scaffold_3119_4
SCNPILOT_CONT_1000_BF_Chloroflexi_54_27, SCNPILOT_CONT_1000_BF_Chloroflexi_54_27, SCNPILOT_CONT_1000_BF_Chloroflexi_54_27, SCNPILOT_CONT_1000_BF_Chloroflexi_54_27, SCNPILOT_CONT_1000_BF_Chloroflexi_54_27, Bacteria

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comp(3067..4017)
DNA (951bp) protein (317aa)
Alpha/beta hydrolase fold domain protein, putative n=1 Tax=Acaryochloris marina (strain MBIC 11017) RepID=B0C5A7_ACAM1
alpha/beta hydrolase domain-containing protein
Alpha/beta hydrolase fold domain protein, putative {ECO:0000313|EMBL:ABW26347.1}; TaxID=329726 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Acaryochloris.;" source="Acaryochloris marina (strain MBIC 11017).;"
SCN18_30_10_14_R1_B_scaffold_3119_5
SCNPILOT_EXPT_1000_BF_Sphingomonas_65_55, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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4216..6537
DNA (2322bp) protein (774aa)
DNA translocase FtsK n=1 Tax=Sphingobium sp. SYK-6 RepID=G2IJK3_9SPHN
ftsK; DNA translocase FtsK
DNA translocase FtsK {ECO:0000313|EMBL:BAK64873.1}; TaxID=627192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. SYK-6.;"
SCN18_30_10_14_R1_B_scaffold_3119_6
CN-SCN_Sphingomonas_18x, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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6686..7384
DNA (699bp) protein (233aa)
Uncharacterized protein n=1 Tax=Sphingomonas sp. MM-1 RepID=M4S750_9SPHN
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGH50344.1}; TaxID=745310 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. MM-1.;"
SCN18_30_10_14_R1_B_scaffold_3119_7
SCNPILOT_EXPT_1000_BF_Sphingomonas_65_55, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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7579..8241
DNA (663bp) protein (221aa)
Putative outer membrane lipoprotein carrier protein LolA n=1 Tax=Sphingobium sp. SYK-6 RepID=G2IJK4_9SPHN
putative outer membrane lipoprotein carrier protein LolA
Outer-membrane lipoprotein carrier protein {ECO:0000256|SAAS:SAAS00088851}; TaxID=627192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. SYK-6.;"
SCN18_30_10_14_R1_B_scaffold_3119_8
SCNPILOT_EXPT_1000_BF_Sphingomonas_65_55, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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8521..9393
DNA (873bp) protein (291aa)
Exodeoxyribonuclease III {ECO:0000313|EMBL:BAK64875.1}; EC=3.1.11.2 {ECO:0000313|EMBL:BAK64875.1};; TaxID=627192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. SYK-6.;"
Exodeoxyribonuclease III n=1 Tax=Sphingobium sp. SYK-6 RepID=G2IJK5_9SPHN
xthA; exodeoxyribonuclease III
Displaying 9 items

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