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SCN18_30_10_14_R1_B_scaffold_3205

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Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_30_10_14_R1_B_scaffold_3205_1
SCNPILOT_EXPT_1000_BF_Sphingomonas_65_55, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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3..896
DNA (894bp) protein (298aa)
GTPase HflX n=1 Tax=Sphingobium sp. SYK-6 RepID=G2ISV8_9SPHN
hflX; putative GTP-binding protein HflX
GTPase HflX {ECO:0000256|HAMAP-Rule:MF_00900}; GTP-binding protein HflX {ECO:0000256|HAMAP-Rule:MF_00900}; TaxID=627192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. SYK-6.;"
SCN18_30_10_14_R1_B_scaffold_3205_2
CN-SCN_Sphingomonas_18x, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(927..1349)
DNA (423bp) protein (141aa)
Uncharacterized protein n=1 Tax=Sphingomonas sp. KA1 RepID=Q0KJP8_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:BAF03294.1}; TaxID=164608 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. KA1.;"
hypothetical protein
SCN18_30_10_14_R1_B_scaffold_3205_3
SCNPILOT_EXPT_1000_BF_Sphingomonas_65_55, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1379..2137)
DNA (759bp) protein (253aa)
Nucleoside triphosphate pyrophosphohydrolase n=1 Tax=Sphingobium sp. SYK-6 RepID=G2ISV7_9SPHN
nucleoside triphosphate pyrophosphohydrolase
Nucleoside triphosphate pyrophosphohydrolase {ECO:0000313|EMBL:BAK66467.1}; TaxID=627192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. SYK-6.;"
SCN18_30_10_14_R1_B_scaffold_3205_4
SCNPILOT_EXPT_1000_BF_Sphingomonas_65_55, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2278..3132)
DNA (855bp) protein (285aa)
Xanthan biosynthesis glucuronosyltransferase GumH n=1 Tax=Sphingobium sp. SYK-6 RepID=G2ISV6_9SPHN
xanthan biosynthesis glucuronosyltransferase GumH
Xanthan biosynthesis glucuronosyltransferase GumH {ECO:0000313|EMBL:BAK66466.1}; TaxID=627192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. SYK-6.;"
SCN18_30_10_14_R1_B_scaffold_3205_trna_1
unknown

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comp(3248..3321)
DNA (74bp)
transferRNA Arg
SCN18_30_10_14_R1_B_scaffold_3205_5
SCNPILOT_EXPT_1000_BF_Sphingomonas_65_55, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3363..3830)
DNA (468bp) protein (156aa)
Putative uncharacterized protein n=1 Tax=Sphingobium sp. SYK-6 RepID=G2ISV5_9SPHN
hypothetical protein
Putative uncharacterized protein {ECO:0000313|EMBL:BAK66465.1}; TaxID=627192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. SYK-6.;"
SCN18_30_10_14_R1_B_scaffold_3205_6
SCNPILOT_EXPT_1000_BF_Sphingomonas_65_55, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3827..4651)
DNA (825bp) protein (275aa)
Putative amidohydrolase n=1 Tax=Sphingobium sp. SYK-6 RepID=G2ISV4_9SPHN
putative amidohydrolase
Putative amidohydrolase {ECO:0000313|EMBL:BAK66464.1}; TaxID=627192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. SYK-6.;"
SCN18_30_10_14_R1_B_scaffold_3205_7
SCNPILOT_EXPT_1000_BF_Sphingomonas_65_55, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(4666..4926)
DNA (261bp) protein (87aa)
Glutaredoxin 3 n=1 Tax=Sphingobium sp. SYK-6 RepID=G2ISV3_9SPHN
glutaredoxin 3
Glutaredoxin 3 {ECO:0000313|EMBL:BAK66463.1}; TaxID=627192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. SYK-6.;"
SCN18_30_10_14_R1_B_scaffold_3205_8
SCNPILOT_EXPT_1000_BF_Sphingomonas_65_55, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4983..5726)
DNA (744bp) protein (248aa)
Putative uncharacterized protein n=1 Tax=Sphingobium sp. SYK-6 RepID=G2ISV2_9SPHN
hypothetical protein
Putative uncharacterized protein {ECO:0000313|EMBL:BAK66462.1}; TaxID=627192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. SYK-6.;"
SCN18_30_10_14_R1_B_scaffold_3205_9
SCNPILOT_EXPT_1000_BF_Sphingomonas_65_55, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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5771..6622
DNA (852bp) protein (284aa)
Putative methyltransferase {ECO:0000313|EMBL:BAK66461.1}; EC=2.1.1.- {ECO:0000313|EMBL:BAK66461.1};; TaxID=627192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. SYK-6.;"
Putative methyltransferase n=1 Tax=Sphingobium sp. SYK-6 RepID=G2ISV1_9SPHN
putative methyltransferase
SCN18_30_10_14_R1_B_scaffold_3205_10
SCNPILOT_EXPT_1000_BF_Sphingomonas_65_55, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(6619..7023)
DNA (405bp) protein (135aa)
CTP pyrophosphohydrolase n=1 Tax=Sphingobium sp. SYK-6 RepID=G2ISV0_9SPHN
CTP pyrophosphohydrolase
CTP pyrophosphohydrolase {ECO:0000313|EMBL:BAK66460.1}; TaxID=627192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. SYK-6.;"
SCN18_30_10_14_R1_B_scaffold_3205_11
SCNPILOT_EXPT_1000_BF_Sphingomonas_65_55, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7130..7273
DNA (144bp) protein (48aa)
Uncharacterized protein n=1 Tax=Sphingobium japonicum BiD32 RepID=N1MLH1_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:CCW17584.1}; TaxID=1301087 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium japonicum BiD32.;"
putative pilin Flp
SCN18_30_10_14_R1_B_scaffold_3205_12
SCNPILOT_EXPT_300_BF_Sphingomonadales_67_9, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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7399..7560
DNA (162bp) protein (54aa)
Flp pilus assembly protein, pilin Flp n=1 Tax=Sphingobium japonicum BiD32 RepID=N1MQ68_9SPHN
Component of type 4 pilus pilin subunit protein {ECO:0000313|EMBL:EZP72932.1}; TaxID=13689 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas paucimobilis (Pseudomonas paucimobilis).;"
putative pilin Flp
SCN18_30_10_14_R1_B_scaffold_3205_13
SCNPILOT_EXPT_1000_BF_Sphingomonas_65_55, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(7662..9119)
DNA (1458bp) protein (486aa)
Peptidase M48 family protein n=1 Tax=Sphingobium sp. SYK-6 RepID=G2ISU7_9SPHN
peptidase M48 family protein
Peptidase M48 family protein {ECO:0000313|EMBL:BAK66457.1}; TaxID=627192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. SYK-6.;"
Displaying 14 items

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