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SCN18_30_10_14_R1_B_scaffold_3348

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Displaying 10 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_30_10_14_R1_B_scaffold_3348_1
SCNPILOT_EXPT_1000_BF_Sphingomonas_65_55, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3..1061)
DNA (1059bp) protein (353aa)
Feruloyl-CoA synthetase n=2 Tax=Sphingomonadaceae RepID=G2IJ07_9SPHN
ferA; feruloyl-CoA synthetase
Feruloyl-CoA synthetase {ECO:0000313|EMBL:BAK67177.1}; TaxID=627192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. SYK-6.;"
SCN18_30_10_14_R1_B_scaffold_3348_2
SCNPILOT_EXPT_1000_BF_Sphingomonas_65_55, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1229..2071)
DNA (843bp) protein (281aa)
Feruloyl-CoA hydratase/lyase n=2 Tax=Sphingomonadaceae RepID=G2IJ08_9SPHN
ferB; feruloyl-CoA hydratase/lyase
Feruloyl-CoA hydratase/lyase {ECO:0000313|EMBL:BAK67178.1}; TaxID=627192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. SYK-6.;"
SCN18_30_10_14_R1_B_scaffold_3348_3
SCNPILOT_EXPT_1000_BF_Sphingomonas_65_55, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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2151..2618
DNA (468bp) protein (156aa)
MarR family transcriptional regulator n=1 Tax=Sphingobium sp. SYK-6 RepID=G2IJ09_9SPHN
MarR family transcriptional regulator
MarR family transcriptional regulator {ECO:0000313|EMBL:BAK67179.1}; TaxID=627192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. SYK-6.;"
SCN18_30_10_14_R1_B_scaffold_3348_trna_1
unknown

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2722..2795
DNA (74bp)
transferRNA Arg
SCN18_30_10_14_R1_B_scaffold_3348_4
SCNPILOT_EXPT_300_BF_Sphingomonas_67_13, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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3212..4804
DNA (1593bp) protein (531aa)
Putative uncharacterized protein n=1 Tax=Sphingobium sp. SYK-6 RepID=G2IKF0_9SPHN
hypothetical protein
Putative uncharacterized protein {ECO:0000313|EMBL:BAK65013.1}; TaxID=627192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. SYK-6.;"
SCN18_30_10_14_R1_B_scaffold_3348_5
SCNPILOT_EXPT_300_BF_Sphingomonadales_67_9, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(5084..5551)
DNA (468bp) protein (156aa)
Uncharacterized protein n=1 Tax=Sphingobium sp. AP49 RepID=J2DHQ4_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:EJK82367.1}; TaxID=1144307 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. AP49.;"
hypothetical protein
SCN18_30_10_14_R1_B_scaffold_3348_6
SCNPILOT_EXPT_1000_BF_Sphingomonas_65_55, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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5611..6513
DNA (903bp) protein (301aa)
Aldo/keto reductase n=1 Tax=Methylobacterium nodulans (strain ORS2060 / LMG 21967) RepID=B8IKM5_METNO
Uncharacterized protein {ECO:0000313|EMBL:KIY10403.1}; TaxID=1594576 species="Bacteria; Cyanobacteria; Stigonematales; Mastigocladus.;" source="Mastigocladus laminosus UU774.;"
aldo/keto reductase
SCN18_30_10_14_R1_B_scaffold_3348_7
SCNpilot_P_inoc_Stenotrophomonas_69_27, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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6594..7490
DNA (897bp) protein (299aa)
Putative uncharacterized protein n=1 Tax=Sphingobium sp. SYK-6 RepID=G2IJ26_9SPHN
hypothetical protein
Putative uncharacterized protein {ECO:0000313|EMBL:BAK67196.1}; TaxID=627192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. SYK-6.;"
SCN18_30_10_14_R1_B_scaffold_3348_8
SCNPILOT_EXPT_1000_BF_Sphingomonas_65_55, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(7552..8043)
DNA (492bp) protein (164aa)
Methylated-DNA--protein-cysteine methyltransferase {ECO:0000256|HAMAP-Rule:MF_00772}; EC=2.1.1.63 {ECO:0000256|HAMAP-Rule:MF_00772};; 6-O-methylguanine-DNA methyltransferase {ECO:0000256|HAMAP-Rule:MF_00772}; O-6-methylguanine-DNA-alkyltransferase {ECO:0000256|HAMAP-Rule:MF_00772}; TaxID=1346791 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium ummariense RL-3.;"
Methylated-DNA--protein-cysteine methyltransferase n=1 Tax=Sphingobium chlorophenolicum L-1 RepID=F6EUL6_SPHCR
methylated-DNA--protein-cysteine methyltransferase
SCN18_30_10_14_R1_B_scaffold_3348_9
SCNPILOT_EXPT_1000_BF_Sphingomonas_65_55, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8273..8710
DNA (438bp) protein (146aa)
LexA repressor {ECO:0000256|HAMAP-Rule:MF_00015, ECO:0000256|RuleBase:RU003992}; EC=3.4.21.88 {ECO:0000256|HAMAP-Rule:MF_00015, ECO:0000256|RuleBase:RU003992};; TaxID=627192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. SYK-6.;"
LexA repressor n=1 Tax=Sphingobium sp. SYK-6 RepID=G2IJ28_9SPHN
lexA; LexA repressor
Displaying 10 items

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