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SCN18_30_10_14_R1_B_scaffold_3488

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Displaying 8 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_30_10_14_R1_B_scaffold_3488_1
scnpilot_dereplicated_Mobile_Sphingomonadales_1, scnpilot_dereplicated_Mobile_Sphingomonadales_1, scnpilot_dereplicated_Mobile_Sphingomonadales_1, scnpilot_dereplicated_Mobile_Sphingomonadales_1, scnpilot_dereplicated_Mobile_Sphingomonadales_1, Mobile_element

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1..375
DNA (375bp) protein (125aa)
hypothetical protein n=1 Tax=Sphingobium chinhatense RepID=UPI000367AF75
Uncharacterized protein {ECO:0000313|EMBL:EPR11563.1}; TaxID=1346790 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium chinhatense IP26.;"
transposase IS3/IS911 family protein
SCN18_30_10_14_R1_B_scaffold_3488_2
scnpilot_dereplicated_Mobile_Sphingomonadales_1, scnpilot_dereplicated_Mobile_Sphingomonadales_1, scnpilot_dereplicated_Mobile_Sphingomonadales_1, scnpilot_dereplicated_Mobile_Sphingomonadales_1, scnpilot_dereplicated_Mobile_Sphingomonadales_1, Mobile_element

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372..719
DNA (348bp) protein (116aa)
Mobile element protein n=2 Tax=Sphingomonadaceae RepID=N1MRN0_9SPHN
IS66 Orf2 family protein
Transposase and inactivated derivative {ECO:0000313|EMBL:EAT10581.1}; TaxID=314266 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. (strain SKA58).;"
SCN18_30_10_14_R1_B_scaffold_3488_3
scnpilot_dereplicated_Mobile_Sphingomonadales_1, scnpilot_dereplicated_Mobile_Sphingomonadales_1, scnpilot_dereplicated_Mobile_Sphingomonadales_1, scnpilot_dereplicated_Mobile_Sphingomonadales_1, scnpilot_dereplicated_Mobile_Sphingomonadales_1, Mobile_element

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919..2328
DNA (1410bp) protein (470aa)
transposase IS66 n=1 Tax=Sphingobium chinhatense RepID=UPI0003720E4D
Transposase IS66 {ECO:0000313|EMBL:EPR11561.1}; TaxID=1346790 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium chinhatense IP26.;"
putative transposase for insertion sequence element
SCN18_30_10_14_R1_B_scaffold_3488_4
SCNPILOT_EXPT_1000_BF_Sphingomonas_65_55, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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2531..3529
DNA (999bp) protein (333aa)
Biotin synthase {ECO:0000256|HAMAP-Rule:MF_01694, ECO:0000256|SAAS:SAAS00009987}; EC=2.8.1.6 {ECO:0000256|HAMAP-Rule:MF_01694, ECO:0000256|SAAS:SAAS00250466};; TaxID=627192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. SYK-6.;"
Biotin synthase n=1 Tax=Sphingobium sp. SYK-6 RepID=G2IIX3_9SPHN
bioB; biotin synthase
SCN18_30_10_14_R1_B_scaffold_3488_5
Sphingopyxis sp. MC1_SCNPILOT_EXPT_500_BF_STEP10_Sphingopyxis_65_8, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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3882..5891
DNA (2010bp) protein (670aa)
Propionyl-CoA carboxylase alpha chain {ECO:0000313|EMBL:BAK67142.1}; EC=6.4.1.3 {ECO:0000313|EMBL:BAK67142.1};; TaxID=627192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. SYK-6.;"
Propionyl-CoA carboxylase alpha chain n=1 Tax=Sphingobium sp. SYK-6 RepID=G2IIX2_9SPHN
pccA; propionyl-CoA carboxylase subunit alpha
SCN18_30_10_14_R1_B_scaffold_3488_6
SCNPILOT_EXPT_1000_BF_Sphingomonas_65_55, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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6225..7394
DNA (1170bp) protein (390aa)
hypothetical protein n=1 Tax=Amycolatopsis methanolica RepID=UPI0003786ABF
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AIJ21354.1}; TaxID=1068978 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis methanolica 239.;"
SCN18_30_10_14_R1_B_scaffold_3488_7
SCNPILOT_EXPT_1000_BF_Sphingomonas_65_55, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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7529..9142
DNA (1614bp) protein (538aa)
Major facilitator superfamily protein n=1 Tax=Sphingobium sp. SYK-6 RepID=G2IIX1_9SPHN
major facilitator superfamily protein
Major facilitator superfamily protein {ECO:0000313|EMBL:BAK67141.1}; TaxID=627192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. SYK-6.;"
SCN18_30_10_14_R1_B_scaffold_3488_8
unknown

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9177..9254
DNA (78bp) protein (26aa)
alr; putative alanine racemase
Displaying 8 items

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