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SCN18_30_10_14_R1_B_scaffold_3567

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Displaying 9 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_30_10_14_R1_B_scaffold_3567_1
Sphingopyxis sp. MC1_SCNPILOT_EXPT_500_BF_STEP10_Sphingopyxis_65_8, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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2..2377
DNA (2376bp) protein (792aa)
Uncharacterized protein n=1 Tax=Sphingobium quisquiliarum P25 RepID=T0HWM2_9SPHN
TonB-dependent receptor plug {ECO:0000313|EMBL:EZP67323.1}; TaxID=13689 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas paucimobilis (Pseudomonas paucimobilis).;"
TonB-dependent receptor plug
SCN18_30_10_14_R1_B_scaffold_3567_2
Singulisphaera acidiphila_SCNPILOT_SOLID2_TRIM150_Singulisphaera_70_9, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

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2447..3574
DNA (1128bp) protein (376aa)
Uncharacterized protein n=1 Tax=Phenylobacterium zucineum (strain HLK1) RepID=B4RDW9_PHEZH
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACG76818.1}; TaxID=450851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Phenylobacterium.;" source="Phenylobacterium zucineum (strain HLK1).;"
SCN18_30_10_14_R1_B_scaffold_3567_3
Sphingobacterium paucimobilis, Sphingobacterium, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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3574..4734
DNA (1161bp) protein (387aa)
Uncharacterized protein n=1 Tax=Sphingobacterium paucimobilis HER1398 RepID=U2IZ42_9SPHI
Uncharacterized protein {ECO:0000313|EMBL:ERJ57969.1}; TaxID=1346330 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Sphingobacterium.;" source="Sphingobacterium paucimobilis HER1398.;"
hypothetical protein
SCN18_30_10_14_R1_B_scaffold_3567_trna_1
unknown

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comp(5192..5264)
DNA (73bp)
transferRNA Lys
SCN18_30_10_14_R1_B_scaffold_3567_4
SCNPILOT_EXPT_1000_BF_Sphingomonas_65_55, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(5291..5821)
DNA (531bp) protein (177aa)
2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase {ECO:0000313|EMBL:BAK65777.1}; EC=2.7.6.3 {ECO:0000313|EMBL:BAK65777.1};; TaxID=627192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. SYK-6.;"
2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase n=1 Tax=Sphingobium sp. SYK-6 RepID=G2IPU9_9SPHN
folK; 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase
SCN18_30_10_14_R1_B_scaffold_3567_5
SCNPILOT_EXPT_1000_BF_Sphingomonas_65_55, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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5845..6528
DNA (684bp) protein (228aa)
Uracil-DNA glycosylase {ECO:0000313|EMBL:BAK65778.1}; EC=3.2.2.27 {ECO:0000313|EMBL:BAK65778.1};; TaxID=627192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. SYK-6.;"
Uracil-DNA glycosylase n=1 Tax=Sphingobium sp. SYK-6 RepID=G2IPV0_9SPHN
uracil-DNA glycosylase
SCN18_30_10_14_R1_B_scaffold_3567_6
SCNPILOT_EXPT_1000_BF_Sphingomonas_65_55, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(6703..6993)
DNA (291bp) protein (97aa)
Putative uncharacterized protein n=1 Tax=Sphingobium sp. SYK-6 RepID=G2ILS6_9SPHN
hypothetical protein
Putative uncharacterized protein {ECO:0000313|EMBL:BAK67669.1}; TaxID=627192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. SYK-6.;"
SCN18_30_10_14_R1_B_scaffold_3567_7
SCNPILOT_EXPT_1000_BF_Sphingomonas_65_55, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(7020..7880)
DNA (861bp) protein (287aa)
Putative amidohydrolase n=1 Tax=Sphingobium sp. SYK-6 RepID=G2ILS5_9SPHN
putative amidohydrolase
Putative amidohydrolase {ECO:0000313|EMBL:BAK67668.1}; TaxID=627192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. SYK-6.;"
SCN18_30_10_14_R1_B_scaffold_3567_8
SCNPILOT_EXPT_1000_BF_Sphingomonas_65_55, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(8017..8151)
DNA (135bp) protein (45aa)
Putative peptidylarginine deiminase {ECO:0000313|EMBL:BAK67667.1}; EC=3.5.3.12 {ECO:0000313|EMBL:BAK67667.1};; TaxID=627192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. SYK-6.;"
Putative peptidylarginine deiminase n=1 Tax=Sphingobium sp. SYK-6 RepID=G2ILS4_9SPHN
putative peptidylarginine deiminase
Displaying 9 items

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