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SCN18_30_10_14_R1_B_scaffold_3621

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Displaying 10 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_30_10_14_R1_B_scaffold_3621_1
SCNPILOT_EXPT_1000_BF_Sphingomonas_65_55, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1..1242)
DNA (1242bp) protein (414aa)
Quinohemoprotein alcohol dehydrogenase {ECO:0000313|EMBL:BAK66536.1}; EC=1.1.99.- {ECO:0000313|EMBL:BAK66536.1};; TaxID=627192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. SYK-6.;"
Quinohemoprotein alcohol dehydrogenase n=1 Tax=Sphingobium sp. SYK-6 RepID=G2IT26_9SPHN
quinohemoprotein alcohol dehydrogenase
SCN18_30_10_14_R1_B_scaffold_3621_2
SCNpilot_BF_INOC_Bordetella_67_10, SCNpilot_BF_INOC_Bordetella_67_10, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(1256..2329)
DNA (1074bp) protein (358aa)
Putative iron-sulfur protein n=1 Tax=Sphingobium sp. SYK-6 RepID=G2IT02_9SPHN
putative iron-sulfur protein
Putative iron-sulfur protein {ECO:0000313|EMBL:BAK66512.1}; TaxID=627192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. SYK-6.;"
SCN18_30_10_14_R1_B_scaffold_3621_3
SCNPILOT_EXPT_300_BF_Novosphingobium_63_58, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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2456..3751
DNA (1296bp) protein (432aa)
Major facilitator superfamily protein n=1 Tax=Sphingobium sp. SYK-6 RepID=G2IK46_9SPHN
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AJP72549.1}; TaxID=1609977 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. WHSC-8.;"
SCN18_30_10_14_R1_B_scaffold_3621_4
Hydrogenophaga sp. PBC_SCNpilot_P_inoc_Hydrogenophaga_70_12, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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3748..4386
DNA (639bp) protein (213aa)
Cytochrome c, class I n=1 Tax=Polaromonas sp. (strain JS666 / ATCC BAA-500) RepID=Q12FG4_POLSJ
class I cytochrome c
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_64_12_curated
SCN18_30_10_14_R1_B_scaffold_3621_5
SCNPILOT_EXPT_300_BF_Novosphingobium_63_58, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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4383..5156
DNA (774bp) protein (258aa)
Uncharacterized protein n=1 Tax=Thiorhodovibrio sp. 970 RepID=H8Z6A2_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EAR62468.1}; TaxID=207954 species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; Neptuniibacter.;" source="Neptuniibacter caesariensis.;"
hypothetical protein
SCN18_30_10_14_R1_B_scaffold_3621_6
SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(5171..6550)
DNA (1380bp) protein (460aa)
Drug resistance transporter, EmrB/QacA subfamily n=1 Tax=Mesorhizobium australicum (strain LMG 24608 / HAMBI 3006 / WSM2073) RepID=L0KQK0_MESAW
Multidrug efflux protein {ECO:0000313|EMBL:GAO53352.1}; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. MD-1.;"
drug resistance transporter, EmrB/QacA subfamily
SCN18_30_10_14_R1_B_scaffold_3621_7
SCNPILOT_EXPT_1000_BF_Sphingomonas_65_55, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6597..7634)
DNA (1038bp) protein (346aa)
Putative iron-sulfur protein n=1 Tax=Sphingobium sp. SYK-6 RepID=G2IT02_9SPHN
putative iron-sulfur protein
Putative iron-sulfur protein {ECO:0000313|EMBL:BAK66512.1}; TaxID=627192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. SYK-6.;"
SCN18_30_10_14_R1_B_scaffold_3621_8
Sphingobium sp. SYK-6, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(7669..8019)
DNA (351bp) protein (117aa)
Putative uncharacterized protein n=1 Tax=Sphingobium sp. SYK-6 RepID=G2IT20_9SPHN
hypothetical protein
Putative uncharacterized protein {ECO:0000313|EMBL:BAK66530.1}; TaxID=627192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. SYK-6.;"
SCN18_30_10_14_R1_B_scaffold_3621_9
SCNPILOT_CONT_750_BF_Acidobacteria_60_9_7, SCNPILOT_CONT_750_BF_Acidobacteria_60_9_7, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

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comp(8006..8290)
DNA (285bp) protein (95aa)
Putative uncharacterized protein n=1 Tax=Sphingobium sp. SYK-6 RepID=G2IT20_9SPHN
hypothetical protein
Putative uncharacterized protein {ECO:0000313|EMBL:BAK66530.1}; TaxID=627192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. SYK-6.;"
SCN18_30_10_14_R1_B_scaffold_3621_10
SCNPILOT_EXPT_300_BF_Novosphingobium_63_58, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8425..8670)
DNA (246bp) protein (82aa)
TonB-dependent receptor n=1 Tax=Novosphingobium sp. PP1Y RepID=F6IKW1_9SPHN
TonB-dependent receptor
TonB-dependent receptor {ECO:0000313|EMBL:CCA92063.1}; TaxID=702113 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. PP1Y.;"
Displaying 10 items

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