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SCN18_30_10_14_R1_B_scaffold_3896

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Displaying 9 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_30_10_14_R1_B_scaffold_3896_1
SCNPILOT_EXPT_1000_BF_Sphingomonas_65_55, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(22..738)
DNA (717bp) protein (239aa)
Putative aromatic acid transporter n=1 Tax=Sphingobium sp. SYK-6 RepID=G2IQU1_9SPHN
putative aromatic acid transporter
Putative aromatic acid transporter {ECO:0000313|EMBL:BAK65963.1}; TaxID=627192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. SYK-6.;"
SCN18_30_10_14_R1_B_scaffold_3896_2
SCNPILOT_EXPT_1000_BF_Sphingomonas_65_55, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(795..1388)
DNA (594bp) protein (198aa)
MarR family transcriptional regulator n=1 Tax=Sphingobium sp. SYK-6 RepID=G2IQU0_9SPHN
MarR family transcriptional regulator
MarR family transcriptional regulator {ECO:0000313|EMBL:BAK65962.1}; TaxID=627192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. SYK-6.;"
SCN18_30_10_14_R1_B_scaffold_3896_3
SCNPILOT_EXPT_1000_BF_Sphingomonas_65_55, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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1415..2893
DNA (1479bp) protein (493aa)
Putative uncharacterized protein n=1 Tax=Sphingobium sp. SYK-6 RepID=G2IQT9_9SPHN
hypothetical protein
Putative uncharacterized protein {ECO:0000313|EMBL:BAK65961.1}; TaxID=627192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. SYK-6.;"
SCN18_30_10_14_R1_B_scaffold_3896_4
SCNPILOT_EXPT_300_BF_Novosphingobium_63_58, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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2976..4157
DNA (1182bp) protein (394aa)
6-aminohexanoate-dimer hydrolase (EC:3.5.1.46)
6-aminohexanoate-dimer hydrolase {ECO:0000313|EMBL:ABD24663.1}; EC=3.5.1.46 {ECO:0000313|EMBL:ABD24663.1};; Flags: Precursor;; TaxID=279238 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium aromaticivorans (strain DSM 12444 / F199).;"
6-aminohexanoate-dimer hydrolase n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=Q2GBW0_NOVAD
SCN18_30_10_14_R1_B_scaffold_3896_5
SCNPILOT_EXPT_1000_BF_Sphingomonas_65_55, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4174..4635
DNA (462bp) protein (154aa)
Putative uncharacterized protein n=1 Tax=Sphingobium sp. SYK-6 RepID=G2IQT8_9SPHN
hypothetical protein
Putative uncharacterized protein {ECO:0000313|EMBL:BAK65960.1}; TaxID=627192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. SYK-6.;"
SCN18_30_10_14_R1_B_scaffold_3896_6
SCNPILOT_EXPT_1000_BF_Sphingomonas_65_55, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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4692..5690
DNA (999bp) protein (333aa)
Putative uncharacterized protein n=1 Tax=Sphingobium sp. SYK-6 RepID=G2IQT7_9SPHN
hypothetical protein
Putative uncharacterized protein {ECO:0000313|EMBL:BAK65959.1}; TaxID=627192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. SYK-6.;"
SCN18_30_10_14_R1_B_scaffold_3896_7
SCNPILOT_EXPT_300_BF_Sphingomonas_67_13, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(5792..7444)
DNA (1653bp) protein (551aa)
Aspartyl-tRNA synthetase {ECO:0000313|EMBL:BAK66184.1}; EC=6.1.1.12 {ECO:0000313|EMBL:BAK66184.1};; TaxID=627192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. SYK-6.;"
Aspartate--tRNA ligase n=1 Tax=Sphingobium sp. SYK-6 RepID=G2IRW8_9SPHN
aspS; aspartyl-tRNA synthetase
SCN18_30_10_14_R1_B_scaffold_3896_8
SCNPILOT_EXPT_1000_BF_Sphingomonas_65_55, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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7596..8879
DNA (1284bp) protein (428aa)
Ribonuclease D {ECO:0000256|HAMAP-Rule:MF_01899}; Short=RNase D {ECO:0000256|HAMAP-Rule:MF_01899};; EC=3.1.13.5 {ECO:0000256|HAMAP-Rule:MF_01899};; TaxID=627192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. SYK-6.;"
Ribonuclease D n=1 Tax=Sphingobium sp. SYK-6 RepID=G2IRW7_9SPHN
rnd; ribonuclease D
SCN18_30_10_14_R1_B_scaffold_3896_9
SCNPILOT_EXPT_1000_BF_Sphingomonas_65_55, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8893..9189
DNA (297bp) protein (99aa)
Putative uncharacterized protein n=1 Tax=Sphingobium sp. SYK-6 RepID=G2IRW6_9SPHN
hypothetical protein
Putative uncharacterized protein {ECO:0000313|EMBL:BAK66182.1}; TaxID=627192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. SYK-6.;"
Displaying 9 items

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