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SCN18_30_10_14_R1_P_scaffold_794

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Displaying items 1-30 of 45 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_30_10_14_R1_P_scaffold_794_1
Pseudonocardia dioxanivorans_SCN_Pseudonocardia_26x, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

366..650
DNA (285bp) protein (95aa)
SCN18_30_10_14_R1_P_scaffold_794_2
Pseudonocardia dioxanivorans_SCN_Pseudonocardia_26x, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

720..1379
DNA (660bp) protein (220aa)
Uncharacterized protein n=1 Tax=Frankia sp. EUN1f RepID=D3CRV1_9ACTO
Uncharacterized protein {ECO:0000313|EMBL:EFC86583.1}; TaxID=102897 species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia sp. EUN1f.;"
SCN18_30_10_14_R1_P_scaffold_794_3
Pseudonocardia dioxanivorans_SCN_Pseudonocardia_26x, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

1467..2597
DNA (1131bp) protein (377aa)
SCN18_30_10_14_R1_P_scaffold_794_4
Pseudonocardia dioxanivorans_SCN_Pseudonocardia_26x, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(2587..3285)
DNA (699bp) protein (233aa)
hypothetical protein n=1 Tax=Nocardiopsis potens RepID=UPI00034B6F64
SCN18_30_10_14_R1_P_scaffold_794_5
Pseudonocardia dioxanivorans_SCN_Pseudonocardia_26x, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

3504..3815
DNA (312bp) protein (104aa)
SCN18_30_10_14_R1_P_scaffold_794_6
Pseudonocardia dioxanivorans_SCN_Pseudonocardia_26x, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3850..8709)
DNA (4860bp) protein (1620aa)
TrwC relaxase n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CK94_PSEUX
TrwC relaxase {ECO:0000313|EMBL:AEA22317.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM; 13855 / CB1190).;"
TrwC relaxase
SCN18_30_10_14_R1_P_scaffold_794_7
Pseudonocardia dioxanivorans_SCN_Pseudonocardia_26x, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(9013..9732)
DNA (720bp) protein (240aa)
Uncharacterized protein n=1 Tax=Agrobacterium tumefaciens F2 RepID=F7UAL0_RHIRD
Uncharacterized protein {ECO:0000313|EMBL:EGP57356.1}; TaxID=1050720 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium; Agrobacterium tumefaciens complex.;" source="Agrobacterium tumefaciens F2.;"
SCN18_30_10_14_R1_P_scaffold_794_8
Pseudonocardia dioxanivorans_SCN_Pseudonocardia_26x, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(9729..10568)
DNA (840bp) protein (280aa)
Uncharacterized protein n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CXG7_PSEUX
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEA26541.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM; 13855 / CB1190).;"
SCN18_30_10_14_R1_P_scaffold_794_9
Pseudonocardia dioxanivorans_SCN_Pseudonocardia_26x, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(10568..11659)
DNA (1092bp) protein (364aa)
SCN18_30_10_14_R1_P_scaffold_794_10
Pseudonocardia dioxanivorans_SCN_Pseudonocardia_26x, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(11656..12051)
DNA (396bp) protein (132aa)
SCN18_30_10_14_R1_P_scaffold_794_11
Pseudonocardia dioxanivorans_SCN_Pseudonocardia_26x, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(12048..13520)
DNA (1473bp) protein (491aa)
DNA methyltransferase n=1 Tax=Amycolatopsis sp. ATCC 39116 RepID=UPI000262656A
Gp65 {ECO:0000313|EMBL:AAN12623.1}; TaxID=205872 species="Viruses; dsDNA viruses, no RNA stage; Caudovirales; Siphoviridae; Che9clikevirus.;" source="Mycobacterium phage Che9c.;"
C-5 cytosine-specific DNA methylase
SCN18_30_10_14_R1_P_scaffold_794_12
Pseudonocardia dioxanivorans_SCN_Pseudonocardia_26x, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(13517..15586)
DNA (2070bp) protein (690aa)
Type IV secretory pathway VirD4 protein-like protein n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CK90_PSEUX
type IV secretory pathway VirD4 protein-like protein
Type IV secretory pathway VirD4 protein-like protein {ECO:0000313|EMBL:AEA22313.1}; Flags: Precursor;; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM; 13855 / CB1190).;"
SCN18_30_10_14_R1_P_scaffold_794_13
Pseudonocardia dioxanivorans_SCN_Pseudonocardia_26x, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(15586..16434)
DNA (849bp) protein (283aa)
hypothetical protein n=1 Tax=Actinopolymorpha alba RepID=UPI000381EBB8
phage recombinase
Putative uncharacterized protein {ECO:0000313|EMBL:GAB05024.1}; TaxID=1075090 species="Bacteria; Actinobacteria; Corynebacteriales; Gordoniaceae; Gordonia.;" source="Gordonia amarae NBRC 15530.;"
SCN18_30_10_14_R1_P_scaffold_794_14
Pseudonocardia dioxanivorans_SCN_Pseudonocardia_26x, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(16431..16964)
DNA (534bp) protein (178aa)
SCN18_30_10_14_R1_P_scaffold_794_15
Pseudonocardia dioxanivorans_SCN_Pseudonocardia_26x, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(16965..17537)
DNA (573bp) protein (191aa)
Transcriptional regulator WhiB n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CZE1_PSEUX
transcription factor WhiB
Transcriptional regulator WhiB {ECO:0000256|HAMAP-Rule:MF_01479}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM; 13855 / CB1190).;"
SCN18_30_10_14_R1_P_scaffold_794_16
Pseudonocardia dioxanivorans_SCN_Pseudonocardia_26x, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(17534..17755)
DNA (222bp) protein (74aa)
Uncharacterized protein n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CXH1_PSEUX
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEA26545.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM; 13855 / CB1190).;"
SCN18_30_10_14_R1_P_scaffold_794_17
Pseudonocardia dioxanivorans_SCN_Pseudonocardia_26x, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(17758..17997)
DNA (240bp) protein (80aa)
hypothetical protein n=1 Tax=Actinopolyspora halophila RepID=UPI0003728CC7
excisionase
DNA binding domain protein, excisionase family {ECO:0000313|EMBL:AEA26546.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM; 13855 / CB1190).;"
SCN18_30_10_14_R1_P_scaffold_794_18
Pseudonocardia dioxanivorans_SCN_Pseudonocardia_26x, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

18138..18500
DNA (363bp) protein (121aa)
GntR family transcriptional regulator n=1 Tax=Salinispora arenicola RepID=UPI000374197A
GntR family transcriptional regulator
Transcriptional regulator, GntR family {ECO:0000313|EMBL:ADG86822.1}; TaxID=469371 species="Bacteria; Actinobacteria; Actinobacteria incertae sedis; Thermobispora.;" source="Thermobispora bispora (strain ATCC 19993 / DSM 43833 / CBS 139.67 /; JCM 10125 / NBRC 14880 / R51).;"
SCN18_30_10_14_R1_P_scaffold_794_19
Pseudonocardia dioxanivorans_SCN_Pseudonocardia_26x, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

18669..20066
DNA (1398bp) protein (466aa)
Uncharacterized protein n=1 Tax=Frankia sp. EUN1f RepID=D3CUJ2_9ACTO
Uncharacterized protein {ECO:0000313|EMBL:EFC85722.1}; Flags: Precursor;; TaxID=102897 species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia sp. EUN1f.;"
hypothetical protein
SCN18_30_10_14_R1_P_scaffold_794_20
Pseudonocardia dioxanivorans_SCN_Pseudonocardia_26x, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(20063..20548)
DNA (486bp) protein (162aa)
hypothetical protein n=1 Tax=Amycolatopsis sp. ATCC 39116 RepID=UPI00026271D1
Phosphotransferase family protein {ECO:0000313|EMBL:KJE25538.1}; TaxID=1502723 species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia sp. CpI1-S.;"
aminoglycoside phosphotransferase
SCN18_30_10_14_R1_P_scaffold_794_21
Pseudonocardia dioxanivorans_SCN_Pseudonocardia_26x, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(21017..22723)
DNA (1707bp) protein (569aa)
Integrase family protein n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CXH6_PSEUX
integrase protein
Integrase family protein {ECO:0000313|EMBL:AEA26550.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM; 13855 / CB1190).;"
SCN18_30_10_14_R1_P_scaffold_794_trna_1
unknown

Not on your lists

comp(22887..22959)
DNA (73bp)
transferRNA Lys
SCN18_30_10_14_R1_P_scaffold_794_22
Pseudonocardia dioxanivorans_SCN_Pseudonocardia_26x, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(23067..23387)
DNA (321bp) protein (107aa)
SCN18_30_10_14_R1_P_scaffold_794_23
Pseudonocardia dioxanivorans_SCN_Pseudonocardia_26x, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(23406..24032)
DNA (627bp) protein (209aa)
Uncharacterized protein n=1 Tax=Saccharothrix espanaensis (strain ATCC 51144 / DSM 44229 / JCM 9112 / NBRC 15066 / NRRL 15764) RepID=K0K382_SACES
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCH31008.1}; TaxID=1179773 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Saccharothrix.;" source="Saccharothrix espanaensis (strain ATCC 51144 / DSM 44229 / JCM 9112 /; NBRC 15066 / NRRL 15764).;"
SCN18_30_10_14_R1_P_scaffold_794_24
Pseudonocardia dioxanivorans_SCN_Pseudonocardia_26x, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

24086..25222
DNA (1137bp) protein (379aa)
tRNA-dihydrouridine synthase {ECO:0000256|PIRNR:PIRNR006621}; EC=1.-.-.- {ECO:0000256|PIRNR:PIRNR006621};; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM; 13855 / CB1190).;"
tRNA-dihydrouridine synthase n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CM55_PSEUX
nifR3 family TIM-barrel protein
SCN18_30_10_14_R1_P_scaffold_794_25
Pseudonocardia dioxanivorans_SCN_Pseudonocardia_26x, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

25327..26121
DNA (795bp) protein (265aa)
Diguanylate cyclase n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CM54_PSEUX
diguanylate cyclase
Diguanylate cyclase {ECO:0000313|EMBL:AEA22737.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM; 13855 / CB1190).;"
SCN18_30_10_14_R1_P_scaffold_794_26
Pseudonocardia dioxanivorans_SCN_Pseudonocardia_26x, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

26842..28446
DNA (1605bp) protein (535aa)
Cell envelope-related transcriptional attenuator n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CM53_PSEUX
cell envelope-related transcriptional attenuator
Cell envelope-related transcriptional attenuator {ECO:0000313|EMBL:AEA22736.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM; 13855 / CB1190).;"
SCN18_30_10_14_R1_P_scaffold_794_27
Pseudonocardia dioxanivorans_SCN_Pseudonocardia_26x, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

28529..29185
DNA (657bp) protein (219aa)
Phosphate-specific transport system accessory protein PhoU n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CM52_PSEUX
phosphate uptake regulator PhoU
Phosphate-specific transport system accessory protein PhoU {ECO:0000256|PIRNR:PIRNR003107}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM; 13855 / CB1190).;"
SCN18_30_10_14_R1_P_scaffold_794_28
Pseudonocardia dioxanivorans_SCN_Pseudonocardia_26x, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

29190..29840
DNA (651bp) protein (217aa)
Phosphate-specific transport system accessory protein PhoU n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CM52_PSEUX
phosphate uptake regulator PhoU
Phosphate-specific transport system accessory protein PhoU {ECO:0000256|PIRNR:PIRNR003107}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM; 13855 / CB1190).;"
SCN18_30_10_14_R1_P_scaffold_794_29
Pseudonocardia dioxanivorans_SCN_Pseudonocardia_26x, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(29837..30463)
DNA (627bp) protein (209aa)
Co/Zn/Cd cation transporters-like protein n=1 Tax=Amycolatopsis azurea DSM 43854 RepID=M2PM75_9PSEU
Co/Zn/Cd cation transporters-like protein {ECO:0000313|EMBL:EMD25618.1}; TaxID=1238180 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis azurea DSM 43854.;"
Co/Zn/Cd cation transporters-like protein
Displaying items 1-30 of 45 in total

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