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SCN18_30_10_14_R1_P_scaffold_860

Search features with annotation key words

Displaying items 1-30 of 46 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_30_10_14_R1_P_scaffold_860_1
Pseudonocardia dioxanivorans_SCN_Pseudonocardia_26x, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(451..1839)
DNA (1389bp) protein (463aa)
Putative uncharacterized protein n=1 Tax=Streptomyces sp. Mg1 RepID=B4VGH6_9ACTO
Putative uncharacterized protein {ECO:0000313|EMBL:EDX27063.1}; TaxID=465541 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sp. Mg1.;"
divergent AAA domain-containing protein
SCN18_30_10_14_R1_P_scaffold_860_2
Pseudonocardia dioxanivorans_SCN_Pseudonocardia_26x, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

2195..2488
DNA (294bp) protein (98aa)
SCN18_30_10_14_R1_P_scaffold_860_3
Pseudonocardia dioxanivorans_SCN_Pseudonocardia_26x, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

2488..3861
DNA (1374bp) protein (458aa)
Relaxase/mobilization nuclease family protein n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F2L6Y6_PSEUX
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHJ58526.1}; TaxID=1156913 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis orientalis HCCB10007.;"
SCN18_30_10_14_R1_P_scaffold_860_4
Pseudonocardia dioxanivorans_SCN_Pseudonocardia_26x, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

3896..4564
DNA (669bp) protein (223aa)
SCN18_30_10_14_R1_P_scaffold_860_5
Pseudonocardia dioxanivorans_SCN_Pseudonocardia_26x, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

4569..5345
DNA (777bp) protein (259aa)
SCN18_30_10_14_R1_P_scaffold_860_6
Pseudonocardia dioxanivorans_SCN_Pseudonocardia_26x, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(5294..5920)
DNA (627bp) protein (209aa)
UPI0003D835AB related cluster n=1 Tax=unknown RepID=UPI0003D835AB
Uncharacterized protein {ECO:0000313|EMBL:KIZ20304.1}; TaxID=1573406 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sp. MNU77.;"
peptidase A24A prepilin type IV
SCN18_30_10_14_R1_P_scaffold_860_7
Pseudonocardia dioxanivorans_SCN_Pseudonocardia_26x, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(5917..8937)
DNA (3021bp) protein (1007aa)
Uncharacterized protein n=1 Tax=Blastococcus saxobsidens (strain DD2) RepID=H6RKK0_BLASD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCG02419.1}; TaxID=1146883 species="Bacteria; Actinobacteria; Geodermatophilales; Geodermatophilaceae; Blastococcus.;" source="Blastococcus saxobsidens (strain DD2).;"
SCN18_30_10_14_R1_P_scaffold_860_8
Pseudonocardia dioxanivorans_SCN_Pseudonocardia_26x, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(8934..9356)
DNA (423bp) protein (141aa)
Uncharacterized protein n=1 Tax=Geodermatophilus obscurus (strain ATCC 25078 / DSM 43160 / JCM 3152 / G-20) RepID=D2S7F4_GEOOG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADB73454.1}; TaxID=526225 species="Bacteria; Actinobacteria; Geodermatophilales; Geodermatophilaceae; Geodermatophilus.;" source="Geodermatophilus obscurus (strain ATCC 25078 / DSM 43160 / JCM 3152 /; G-20).;"
SCN18_30_10_14_R1_P_scaffold_860_9
Pseudonocardia dioxanivorans_SCN_Pseudonocardia_26x, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(9353..9799)
DNA (447bp) protein (149aa)
UPI0003D7CD6A related cluster n=1 Tax=unknown RepID=UPI0003D7CD6A
Membrane protein {ECO:0000313|EMBL:KIZ20192.1}; TaxID=1573406 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sp. MNU77.;"
TadE-like protein
SCN18_30_10_14_R1_P_scaffold_860_10
Pseudonocardia dioxanivorans_SCN_Pseudonocardia_26x, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(9796..10188)
DNA (393bp) protein (131aa)
hypothetical protein n=1 Tax=Streptomyces sp. FxanaD5 RepID=UPI00036C910C
hypothetical protein
SCN18_30_10_14_R1_P_scaffold_860_11
Pseudonocardia dioxanivorans_SCN_Pseudonocardia_26x, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(10201..10404)
DNA (204bp) protein (68aa)
SCN18_30_10_14_R1_P_scaffold_860_12
Pseudonocardia dioxanivorans_SCN_Pseudonocardia_26x, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(10430..11317)
DNA (888bp) protein (296aa)
Type II secretion system protein n=1 Tax=Amycolatopsis decaplanina DSM 44594 RepID=M2YA02_9PSEU
Type II secretion system protein {ECO:0000313|EMBL:EME51727.1}; TaxID=1284240 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis decaplanina DSM 44594.;"
type II secretion system protein
SCN18_30_10_14_R1_P_scaffold_860_13
Pseudonocardia dioxanivorans_SCN_Pseudonocardia_26x, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(11314..12219)
DNA (906bp) protein (302aa)
Type II secretion system protein n=1 Tax=Nocardioides sp. CF8 RepID=R7XXG9_9ACTO
Membrane protein {ECO:0000313|EMBL:EWT06790.1}; TaxID=584657 species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Intrasporangium.;" source="Intrasporangium chromatireducens Q5-1.;"
type II secretion system F domain-containing protein
SCN18_30_10_14_R1_P_scaffold_860_14
Pseudonocardia dioxanivorans_SCN_Pseudonocardia_26x, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(12216..13586)
DNA (1371bp) protein (457aa)
Flp pilus assembly protein, ATPase CpaF n=1 Tax=Modestobacter marinus (strain BC501) RepID=I4EUQ4_MODMB
ATP/GTP-binding protein {ECO:0000313|EMBL:KGM11879.1}; TaxID=947969 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Cellulomonas.;" source="Cellulomonas carbonis T26.;"
flp pilus assembly protein, ATPase CpaF
SCN18_30_10_14_R1_P_scaffold_860_15
Pseudonocardia dioxanivorans_SCN_Pseudonocardia_26x, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(13583..14314)
DNA (732bp) protein (244aa)
Uncharacterized protein n=1 Tax=Geodermatophilus obscurus (strain ATCC 25078 / DSM 43160 / JCM 3152 / G-20) RepID=D2S7E7_GEOOG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADB73447.1}; TaxID=526225 species="Bacteria; Actinobacteria; Geodermatophilales; Geodermatophilaceae; Geodermatophilus.;" source="Geodermatophilus obscurus (strain ATCC 25078 / DSM 43160 / JCM 3152 /; G-20).;"
SCN18_30_10_14_R1_P_scaffold_860_16
Pseudonocardia dioxanivorans_SCN_Pseudonocardia_26x, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(14318..14947)
DNA (630bp) protein (210aa)
SAF domain protein n=1 Tax=Geodermatophilus obscurus (strain ATCC 25078 / DSM 43160 / JCM 3152 / G-20) RepID=D2S7E6_GEOOG
SAF domain-containing protein
SAF domain protein {ECO:0000313|EMBL:ADB73446.1}; TaxID=526225 species="Bacteria; Actinobacteria; Geodermatophilales; Geodermatophilaceae; Geodermatophilus.;" source="Geodermatophilus obscurus (strain ATCC 25078 / DSM 43160 / JCM 3152 /; G-20).;"
SCN18_30_10_14_R1_P_scaffold_860_17
Pseudonocardia dioxanivorans_SCN_Pseudonocardia_26x, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(14947..15750)
DNA (804bp) protein (268aa)
Uncharacterized protein n=1 Tax=Blastococcus saxobsidens (strain DD2) RepID=H6RKJ0_BLASD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCG02409.1}; TaxID=1146883 species="Bacteria; Actinobacteria; Geodermatophilales; Geodermatophilaceae; Blastococcus.;" source="Blastococcus saxobsidens (strain DD2).;"
SCN18_30_10_14_R1_P_scaffold_860_18
Pseudonocardia dioxanivorans_SCN_Pseudonocardia_26x, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(15756..16289)
DNA (534bp) protein (178aa)
hypothetical protein n=1 Tax=Amycolatopsis balhimycina RepID=UPI000364AA05
SCN18_30_10_14_R1_P_scaffold_860_19
Pseudonocardia dioxanivorans_SCN_Pseudonocardia_26x, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

16622..17473
DNA (852bp) protein (284aa)
Bifunctional DNA primase/polymerase n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F2L750_PSEUX
Uncharacterized protein {ECO:0000313|EMBL:KGI80633.1}; TaxID=414996 species="Bacteria; Actinobacteria; Actinopolysporales; Actinopolysporaceae; Actinopolyspora.;" source="Actinopolyspora erythraea.;"
Bifunctional DNA primase/polymerase
SCN18_30_10_14_R1_P_scaffold_860_20
Pseudonocardia dioxanivorans_SCN_Pseudonocardia_26x, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

17499..17906
DNA (408bp) protein (136aa)
SCN18_30_10_14_R1_P_scaffold_860_21
Pseudonocardia dioxanivorans_SCN_Pseudonocardia_26x, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

18022..18546
DNA (525bp) protein (175aa)
SCN18_30_10_14_R1_P_scaffold_860_22
Pseudonocardia dioxanivorans_SCN_Pseudonocardia_26x, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(18593..19069)
DNA (477bp) protein (159aa)
hypothetical protein n=1 Tax=Amycolatopsis nigrescens RepID=UPI00037388B6
Uncharacterized protein {ECO:0000313|EMBL:CEL13546.1}; TaxID=703222 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Kibdelosporangium.;" source="Kibdelosporangium sp. MJ126-NF4.;"
hypothetical protein
SCN18_30_10_14_R1_P_scaffold_860_23
Pseudonocardia dioxanivorans_SCN_Pseudonocardia_26x, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(19109..20503)
DNA (1395bp) protein (465aa)
Uncharacterized protein n=3 Tax=Amycolatopsis mediterranei RepID=G0FU36_AMYMS
Putative regulatory protein {ECO:0000313|EMBL:CEL13547.1}; TaxID=703222 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Kibdelosporangium.;" source="Kibdelosporangium sp. MJ126-NF4.;"
hypothetical protein
SCN18_30_10_14_R1_P_scaffold_860_24
Pseudonocardia dioxanivorans_SCN_Pseudonocardia_26x, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(20503..20871)
DNA (369bp) protein (123aa)
SCN18_30_10_14_R1_P_scaffold_860_25
Pseudonocardia dioxanivorans_SCN_Pseudonocardia_26x, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(20922..21365)
DNA (444bp) protein (148aa)
Putative MerR family transcriptional regulator n=1 Tax=Rhodococcus opacus (strain B4) RepID=C1BCY0_RHOOB
Transcriptional regulator {ECO:0000313|EMBL:CDO25726.1}; TaxID=53462 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium.;" source="Mycobacterium mageritense.;"
Putative MerR family transcriptional regulator
SCN18_30_10_14_R1_P_scaffold_860_26
Pseudonocardia dioxanivorans_SCN_Pseudonocardia_26x, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(21343..21903)
DNA (561bp) protein (187aa)
SCN18_30_10_14_R1_P_scaffold_860_27
Pseudonocardia dioxanivorans_SCN_Pseudonocardia_26x, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(21888..22283)
DNA (396bp) protein (132aa)
SCN18_30_10_14_R1_P_scaffold_860_28
Pseudonocardia dioxanivorans_SCN_Pseudonocardia_26x, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(22280..24097)
DNA (1818bp) protein (606aa)
TRAG family protein n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F2L6Z5_PSEUX
TRAG family protein
TRAG family protein {ECO:0000313|EMBL:AEA28968.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM; 13855 / CB1190).;"
SCN18_30_10_14_R1_P_scaffold_860_29
Pseudonocardia dioxanivorans_SCN_Pseudonocardia_26x, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(24094..25521)
DNA (1428bp) protein (476aa)
Uncharacterized protein n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F2L6Z6_PSEUX
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEA28969.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM; 13855 / CB1190).;"
SCN18_30_10_14_R1_P_scaffold_860_30
Pseudonocardia dioxanivorans_SCN_Pseudonocardia_26x, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(25534..27006)
DNA (1473bp) protein (491aa)
Uncharacterized protein n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F2L6Z7_PSEUX
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEA28970.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM; 13855 / CB1190).;"
Displaying items 1-30 of 46 in total

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