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SCN18_30_10_14_R2_B_scaffold_4162

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Displaying 8 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_30_10_14_R2_B_scaffold_4162_1
Pseudonocardia dioxanivorans_SCN_Pseudonocardia_26x, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

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comp(2..1795)
DNA (1794bp) protein (598aa)
hypothetical protein n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C3D20
Matrixin
Matrixin {ECO:0000313|EMBL:AGA28954.1}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM; B-2454 / MOB10).;"
SCN18_30_10_14_R2_B_scaffold_4162_2
Pseudonocardia dioxanivorans_SCN_Pseudonocardia_26x, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

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2097..4925
DNA (2829bp) protein (943aa)
possible protein kinase n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C3D1F
serine/threonine protein kinase
Serine/threonine protein kinase {ECO:0000313|EMBL:AGA30724.1}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM; B-2454 / MOB10).;"
SCN18_30_10_14_R2_B_scaffold_4162_3
Pseudonocardia dioxanivorans_SCN_Pseudonocardia_26x, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

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5068..5835
DNA (768bp) protein (256aa)
PAS/PAC sensor hybrid histidine kinase {ECO:0000313|EMBL:ABE61135.1}; EC=2.7.13.3 {ECO:0000313|EMBL:ABE61135.1};; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
PAS/PAC sensor hybrid histidine kinase n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QRL2_NITHX
PAS/PAC sensor hybrid histidine kinase
SCN18_30_10_14_R2_B_scaffold_4162_4
Pseudonocardia dioxanivorans_SCN_Pseudonocardia_26x, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

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comp(5994..6458)
DNA (465bp) protein (155aa)
hypothetical protein n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C3B50
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGA29093.1}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM; B-2454 / MOB10).;"
SCN18_30_10_14_R2_B_scaffold_4162_5
Pseudonocardia dioxanivorans_SCN_Pseudonocardia_26x, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

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comp(6656..7420)
DNA (765bp) protein (255aa)
3-oxoacyl-ACP reductase n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C3B51
short-chain dehydrogenase/reductase SDR
Tax=RBG_13_Planctomycetes_63_9_curated
SCN18_30_10_14_R2_B_scaffold_4162_6
Pseudonocardia dioxanivorans_SCN_Pseudonocardia_26x, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

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comp(7528..8478)
DNA (951bp) protein (317aa)
Peptidylprolyl isomerase {ECO:0000256|SAAS:SAAS00143148}; EC=5.2.1.8 {ECO:0000256|SAAS:SAAS00143148};; TaxID=120965 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; environmental samples.;" source="uncultured planctomycete.;"
PpiC-type peptidyl-prolyl cis-trans isomerase n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C3B52
parvulin-like peptidyl-prolyl isomerase
SCN18_30_10_14_R2_B_scaffold_4162_7
Pseudonocardia dioxanivorans_SCN_Pseudonocardia_26x, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

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8570..9631
DNA (1062bp) protein (354aa)
hypothetical protein n=1 Tax=Zavarzinella formosa RepID=UPI0002E967ED
putative peptidase
Tax=RIFCSPLOWO2_12_FULL_PLX_64_10_curated
SCN18_30_10_14_R2_B_scaffold_4162_8
Pseudonocardia dioxanivorans_SCN_Pseudonocardia_26x, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

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9993..11309
DNA (1317bp) protein (439aa)
major facilitator superfamily MFS_1 n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C384E
Major facilitator superfamily MFS-1 {ECO:0000313|EMBL:EMI18303.1}; TaxID=1265738 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Rhodopirellula.;" source="Rhodopirellula maiorica SM1.;"
MFS transporter
Displaying 8 items

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