ggKbase home page

SCN18_30_10_14_R2_B_scaffold_4273

Search features with annotation key words

Displaying 10 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_30_10_14_R2_B_scaffold_4273_1
Singulisphaera acidiphila_SCNPILOT_SOLID2_TRIM150_Singulisphaera_70_9, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

1..789
DNA (789bp) protein (263aa)
YD repeat protein n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C567A
Peptidase S8 and S53, subtilisin, kexin, sedolisin {ECO:0000313|EMBL:KKW01493.1}; TaxID=1618850 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWA2_48_9.;"
multicopper oxidase type 2
SCN18_30_10_14_R2_B_scaffold_4273_2
Magnetospirillum gryphiswaldense_SCNpilot_P_inoc_Magnetospirillum_64_120, Magnetospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

813..1367
DNA (555bp) protein (185aa)
cob(I)yrinic acid a,c-diamide adenosyltransferase n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C3654
ATP/cobalamin adenosyltransferase
Tax=RIFCSPHIGHO2_02_FULL_WOR_2_68_15_curated
SCN18_30_10_14_R2_B_scaffold_4273_3
SCNPILOT_SOLID_1_TRIM150_Actinobacteria_71_9, SCNPILOT_SOLID_1_TRIM150_Actinobacteria_71_9, SCNPILOT_SOLID_1_TRIM150_Actinobacteria_71_9, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

1499..1729
DNA (231bp) protein (77aa)
translation initiation factor IF-1 n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C5230
infA; putative translation initiation factor IF-1
Tax=GWA2_Desulfovibrionales_65_9_curated
SCN18_30_10_14_R2_B_scaffold_4273_4
CN-SCN_Arenimonas_307x, Arenimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2234..3340
DNA (1107bp) protein (369aa)
EAL domain-containing protein n=1 Tax=Pseudomonas stutzeri RCH2 RepID=L0GPU7_PSEST
Diguanylate phosphodiesterase {ECO:0000313|EMBL:AHY60801.1}; TaxID=216778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas rhizophila.;"
diguanylate phosphodiesterase
SCN18_30_10_14_R2_B_scaffold_4273_5
SCN_Variovorax_21x, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3337..3714
DNA (378bp) protein (126aa)
RRM domain-containing RNA-binding protein n=1 Tax=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) RepID=L0DDX1_SINAD
RRM domain-containing RNA-binding protein
RRM domain-containing RNA-binding protein {ECO:0000313|EMBL:AGA27437.1}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM; B-2454 / MOB10).;"
SCN18_30_10_14_R2_B_scaffold_4273_6
scnpilot_dereplicated_Eukaryote_unknown_8, scnpilot_dereplicated_Eukaryote_unknown_8, scnpilot_dereplicated_Eukaryote_unknown_8, scnpilot_dereplicated_Eukaryote_unknown_8, scnpilot_dereplicated_Eukaryote_unknown_8, Eukaryote

Not on your lists

comp(3896..7333)
DNA (3438bp) protein (1146aa)
hypothetical protein, partial n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C3E5D
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGA26542.1}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM; B-2454 / MOB10).;"
SCN18_30_10_14_R2_B_scaffold_4273_7
unknown

Not on your lists

comp(7439..7723)
DNA (285bp) protein (95aa)

This feature has no annotations

SCN18_30_10_14_R2_B_scaffold_4273_8
CN-SCN_Eukaryote_25x, CN-SCN_Eukaryote_25x, CN-SCN_Eukaryote_25x, CN-SCN_Eukaryote_25x, CN-SCN_Eukaryote_25x, Eukaryote

Not on your lists

comp(7728..8891)
DNA (1164bp) protein (388aa)
Beta-lactamase domain protein n=1 Tax=Tolumonas auensis (strain DSM 9187 / TA4) RepID=C4LAV9_TOLAT
beta-lactamase domain-containing protein
Beta-lactamase domain protein {ECO:0000313|EMBL:ACQ92313.1}; TaxID=595494 species="Bacteria; Proteobacteria; Gammaproteobacteria; Aeromonadales; Aeromonadaceae; Tolumonas.;" source="Tolumonas auensis (strain DSM 9187 / TA4).;"
SCN18_30_10_14_R2_B_scaffold_4273_9
Singulisphaera acidiphila_SCNPILOT_SOLID2_TRIM150_Singulisphaera_70_9, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

comp(8892..10388)
DNA (1497bp) protein (499aa)
Glycerol kinase {ECO:0000256|HAMAP-Rule:MF_00186, ECO:0000256|SAAS:SAAS00029376}; EC=2.7.1.30 {ECO:0000256|HAMAP-Rule:MF_00186, ECO:0000256|SAAS:SAAS00029376};; ATP:glycerol 3-phosphotransferase {ECO:0000256|HAMAP-Rule:MF_00186}; Glycerokinase {ECO:0000256|HAMAP-Rule:MF_00186}; TaxID=525371 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Roseomonas.;" source="Roseomonas cervicalis ATCC 49957.;"
glycerol kinase n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C56E0
glycerol kinase
SCN18_30_10_14_R2_B_scaffold_4273_10
SCNPILOT_SOLID2_TRIM150_Hydrogenophilales_64_113, SCNPILOT_SOLID2_TRIM150_Hydrogenophilales_64_113, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10407..10871)
DNA (465bp) protein (155aa)
Flagellar basal-body rod protein FlgG n=1 Tax=Sideroxydans lithotrophicus (strain ES-1) RepID=D5CMX4_SIDLE
flagellar basal-body rod protein FlgG
Flagellar basal-body rod protein FlgG {ECO:0000313|EMBL:ADE10810.1}; TaxID=580332 species="Bacteria; Proteobacteria; Betaproteobacteria; Gallionellales; Gallionellaceae; Sideroxydans.;" source="Sideroxydans lithotrophicus (strain ES-1).;"
Displaying 10 items

View Taxonomy