ggKbase home page

SCN18_30_10_14_R2_B_scaffold_4367

Search features with annotation key words

Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_30_10_14_R2_B_scaffold_4367_1
CN-SCN_Microbacterium_18x, Microbacterium, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

Not on your lists

470..1501
DNA (1032bp) protein (344aa)
Uncharacterized protein n=1 Tax=Rhodopirellula europaea 6C RepID=M2AHA4_9PLAN
Uncharacterized protein {ECO:0000313|EMBL:EMB16485.1}; TaxID=1263867 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Rhodopirellula.;" source="Rhodopirellula europaea 6C.;"
hypothetical protein
SCN18_30_10_14_R2_B_scaffold_4367_2
CN-SCN_Microbacterium_18x, Microbacterium, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

Not on your lists

1619..1942
DNA (324bp) protein (108aa)
hypothetical protein n=1 Tax=Zavarzinella formosa RepID=UPI0002D94118
Uncharacterized protein {ECO:0000313|EMBL:CCV16350.1}; TaxID=1297570 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. STM 4661.;"
hypothetical protein
SCN18_30_10_14_R2_B_scaffold_4367_3
CN-SCN_Microbacterium_18x, Microbacterium, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

Not on your lists

2290..2604
DNA (315bp) protein (105aa)
Uncharacterized protein id=3706427 bin=GWF2_Geobacter_54_21 species=ACD79 genus=ACD79 taxon_order=ACD79 taxon_class=ACD79 phylum=Clamydiae tax=GWF2_Geobacter_54_21 organism_group=Deltaproteobacteria organism_desc=Good
Tax=GWC2_Geobacteraceae_55_20_curated
SCN18_30_10_14_R2_B_scaffold_4367_4
CN-SCN_Microbacterium_18x, Microbacterium, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

Not on your lists

comp(2662..2817)
DNA (156bp) protein (52aa)
Putative uncharacterized protein n=1 Tax=uncultured Desulfobacterium sp. RepID=E1Y8Q6_9DELT
Filamentation induced by cAMP protein Fic
Tax=RBG_13_Nitrospirae_43_8_curated
SCN18_30_10_14_R2_B_scaffold_4367_5
CN-SCN_Microbacterium_18x, Microbacterium, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

Not on your lists

comp(2827..3738)
DNA (912bp) protein (304aa)
Uncharacterized protein n=1 Tax=Nitrosococcus halophilus (strain Nc4) RepID=D5C2U0_NITHN
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADE16765.1}; TaxID=472759 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Chromatiaceae; Nitrosococcus.;" source="Nitrosococcus halophilus (strain Nc4).;"
SCN18_30_10_14_R2_B_scaffold_4367_6
CN-SCN_Microbacterium_18x, Microbacterium, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

Not on your lists

comp(3735..4361)
DNA (627bp) protein (209aa)
hypothetical protein n=1 Tax=Methylohalobius crimeensis RepID=UPI0003B70151
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADE16766.1}; TaxID=472759 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Chromatiaceae; Nitrosococcus.;" source="Nitrosococcus halophilus (strain Nc4).;"
SCN18_30_10_14_R2_B_scaffold_4367_7
CN-SCN_Microbacterium_18x, Microbacterium, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

Not on your lists

comp(4525..4803)
DNA (279bp) protein (93aa)
Uncharacterized protein n=1 Tax=Aromatoleum aromaticum (strain EbN1) RepID=Q5P950_AROAE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CAI06159.1}; TaxID=76114 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Aromatoleum.;" source="Aromatoleum aromaticum (strain EbN1) (Azoarcus sp. (strain EbN1)).;"
SCN18_30_10_14_R2_B_scaffold_4367_8
CN-SCN_Microbacterium_18x, Microbacterium, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

Not on your lists

comp(4848..5474)
DNA (627bp) protein (209aa)
Probable RNA 2'-phosphotransferase {ECO:0000256|HAMAP-Rule:MF_00299}; EC=2.7.1.- {ECO:0000256|HAMAP-Rule:MF_00299};; TaxID=485913 species="Bacteria; Chloroflexi; Ktedonobacteria; Ktedonobacterales; Ktedonobacteraceae; Ktedonobacter.;" source="Ktedonobacter racemifer DSM 44963.;"
Probable RNA 2'-phosphotransferase n=1 Tax=Ktedonobacter racemifer DSM 44963 RepID=D6TMT3_9CHLR
phosphotransferase kpta/tpt1
SCN18_30_10_14_R2_B_scaffold_4367_9
CN-SCN_Microbacterium_18x, Microbacterium, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

Not on your lists

comp(5471..5743)
DNA (273bp) protein (91aa)
SCN18_30_10_14_R2_B_scaffold_4367_10
CN-SCN_Microbacterium_18x, Microbacterium, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

Not on your lists

comp(5776..6990)
DNA (1215bp) protein (405aa)
hypothetical protein n=1 Tax=Zavarzinella formosa RepID=UPI00030AFE3E
Site-specific recombinase, phage integrase family {ECO:0000313|EMBL:EMI57117.1}; TaxID=1263870 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Rhodopirellula.;" source="Rhodopirellula sallentina SM41.;"
site-specific recombinase XerD
SCN18_30_10_14_R2_B_scaffold_4367_trna_1
unknown

Not on your lists

comp(7169..7255)
DNA (87bp)
transferRNA Ser
SCN18_30_10_14_R2_B_scaffold_4367_11
CN-SCN_Microbacterium_18x, Microbacterium, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

Not on your lists

7318..7929
DNA (612bp) protein (204aa)
hypothetical protein n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C3FF3
hypothetical protein
Tax=RBG_16_Chloroflexi_68_14_curated
Displaying 12 items

View Taxonomy